RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 FIGNL1Q6PIW4 674 aa12□□□□□ -0.49
CCDC7-209ENST00000539197 SERBP1Q8NC51 408 aaKnown RBP eCLIP12□□□□□ -0.49
CCDC7-209ENST00000539197 GTF2IP78347 998 aa11.99□□□□□ -0.49
CCDC7-209ENST00000539197 GOLGA6L1Q8N7Z2 621 aa11.99□□□□□ -0.49
CCDC7-209ENST00000539197 CDK2AP1O14519 115 aa11.98□□□□□ -0.49
CCDC7-209ENST00000539197 ITGB2P05107 769 aa11.98□□□□□ -0.49
CCDC7-209ENST00000539197 DCAF5Q96JK2 942 aa11.98□□□□□ -0.49
CCDC7-209ENST00000539197 NLRP8Q86W28 1048 aa11.97□□□□□ -0.49
CCDC7-209ENST00000539197 EDARADDQ8WWZ3 215 aa11.97□□□□□ -0.49
CCDC7-209ENST00000539197 CABP1Q9NZU7 370 aa11.97□□□□□ -0.49
CCDC7-209ENST00000539197 NOD1Q9Y239 953 aa11.97□□□□□ -0.49
CCDC7-209ENST00000539197 A0A1W2PNR3 127 aa11.96□□□□□ -0.49
CCDC7-209ENST00000539197 DCDC2BA2VCK2 349 aa11.96□□□□□ -0.49
CCDC7-209ENST00000539197 LZTS3O60299 673 aaPredicted RBP11.96□□□□□ -0.49
CCDC7-209ENST00000539197 NBPF1Q3BBV0 1214 aa11.96□□□□□ -0.49
CCDC7-209ENST00000539197 ARSJQ5FYB0 599 aaPredicted RBP11.96□□□□□ -0.49
CCDC7-209ENST00000539197 TBCELQ5QJ74 424 aa11.96□□□□□ -0.49
CCDC7-209ENST00000539197 ZNF358Q9NW07 568 aa11.96□□□□□ -0.49
CCDC7-209ENST00000539197 GGA1Q9UJY5 639 aa11.96□□□□□ -0.49
CCDC7-209ENST00000539197 PCDHGC4Q9Y5F7 938 aa11.96□□□□□ -0.49
CCDC7-209ENST00000539197 USP17L5A8MUK1 530 aa11.95□□□□□ -0.5
CCDC7-209ENST00000539197 PSME1Q06323 249 aa11.95□□□□□ -0.5
CCDC7-209ENST00000539197 PLA2G4EQ3MJ16 856 aa11.95□□□□□ -0.5
CCDC7-209ENST00000539197 NFATC2IPQ8NCF5 419 aa11.95□□□□□ -0.5
CCDC7-209ENST00000539197 ZDHHC1Q8WTX9 485 aa11.95□□□□□ -0.5
CCDC7-209ENST00000539197 BACH1O14867 736 aa11.94□□□□□ -0.5
CCDC7-209ENST00000539197 ATXN7O15265 892 aaPredicted RBP11.94□□□□□ -0.5
CCDC7-209ENST00000539197 UBTFP17480 764 aaKnown RBP11.94□□□□□ -0.5
CCDC7-209ENST00000539197 TATP17735 454 aaPredicted RBP11.94□□□□□ -0.5
CCDC7-209ENST00000539197 TXLNAP40222 546 aa11.94□□□□□ -0.5
CCDC7-209ENST00000539197 ZIC5Q96T25 663 aa11.94□□□□□ -0.5
CCDC7-209ENST00000539197 RAD21O60216 631 aa11.93□□□□□ -0.5
CCDC7-209ENST00000539197 HOXB4P17483 251 aaPredicted RBP11.93□□□□□ -0.5
CCDC7-209ENST00000539197 CD33P20138 364 aa11.93□□□□□ -0.5
CCDC7-209ENST00000539197 UCN2Q96RP3 112 aa11.93□□□□□ -0.5
CCDC7-209ENST00000539197 RRAGCQ9HB90 399 aa11.93□□□□□ -0.5
CCDC7-209ENST00000539197 MKL2Q9ULH7 1088 aa11.93□□□□□ -0.5
CCDC7-209ENST00000539197 KIAA1024Q9UPX6 916 aa11.93□□□□□ -0.5
CCDC7-209ENST00000539197 LOC100996750A0A140TA64 210 aa11.92□□□□□ -0.5
CCDC7-209ENST00000539197 MAPTP10636 758 aaKnown RBP11.92□□□□□ -0.5
CCDC7-209ENST00000539197 TNP2Q05952 138 aa11.92□□□□□ -0.5
CCDC7-209ENST00000539197 SLCO4C1Q6ZQN7 724 aa11.92□□□□□ -0.5
CCDC7-209ENST00000539197 KRTAP4-6Q9BYQ5 205 aa11.92□□□□□ -0.5
CCDC7-209ENST00000539197 ZDHHC3Q9NYG2 299 aa11.92□□□□□ -0.5
CCDC7-209ENST00000539197 SCHIP1Q9P0W5 487 aaPredicted RBP11.92□□□□□ -0.5
CCDC7-209ENST00000539197 AMPD1P23109 780 aa11.91□□□□□ -0.5
CCDC7-209ENST00000539197 TNS4Q8IZW8 715 aa11.91□□□□□ -0.5
CCDC7-209ENST00000539197 KLF15Q9UIH9 416 aa11.91□□□□□ -0.5
CCDC7-209ENST00000539197 NEURL1BA8MQ27 555 aa11.9□□□□□ -0.5
CCDC7-209ENST00000539197 MSTNO14793 375 aa11.9□□□□□ -0.5
CCDC7-209ENST00000539197 KHNYNO15037 678 aaKnown RBP11.9□□□□□ -0.5
CCDC7-209ENST00000539197 ARAFP10398 606 aa11.9□□□□□ -0.5
CCDC7-209ENST00000539197 EPHA4P54764 986 aa11.9□□□□□ -0.5
CCDC7-209ENST00000539197 SH3PXD2AQ5TCZ1 1133 aa11.9□□□□□ -0.5
CCDC7-209ENST00000539197 HDGFL1Q5TGJ6 251 aa11.9□□□□□ -0.5
CCDC7-209ENST00000539197 STRN4Q9NRL3 753 aa11.9□□□□□ -0.5
CCDC7-209ENST00000539197 ZBTB7BO15156 539 aaPredicted RBP11.89□□□□□ -0.51
CCDC7-209ENST00000539197 GJA3Q9Y6H8 435 aa11.89□□□□□ -0.51
CCDC7-209ENST00000539197 COL8A1P27658 744 aa11.88□□□□□ -0.51
CCDC7-209ENST00000539197 CLDN10P78369 228 aa11.88□□□□□ -0.51
CCDC7-209ENST00000539197 FLIIQ13045 1269 aa11.88□□□□□ -0.51
CCDC7-209ENST00000539197 L3MBTL2Q969R5 705 aa11.88□□□□□ -0.51
CCDC7-209ENST00000539197 SUV39H2Q9H5I1 410 aa11.88□□□□□ -0.51
CCDC7-209ENST00000539197 USP17L3A6NCW0 530 aa11.87□□□□□ -0.51
CCDC7-209ENST00000539197 USP17L4A6NCW7 530 aa11.87□□□□□ -0.51
CCDC7-209ENST00000539197 EPXP11678 715 aa11.87□□□□□ -0.51
CCDC7-209ENST00000539197 USP17L2Q6R6M4 530 aa11.87□□□□□ -0.51
CCDC7-209ENST00000539197 LINC00114Q6XXX2 140 aa11.87□□□□□ -0.51
CCDC7-209ENST00000539197 BICDL1Q6ZP65 573 aa11.87□□□□□ -0.51
CCDC7-209ENST00000539197 USP17L1Q7RTZ2 530 aa11.87□□□□□ -0.51
CCDC7-209ENST00000539197 SLC9A9Q8IVB4 645 aa11.87□□□□□ -0.51
CCDC7-209ENST00000539197 TPCN2Q8NHX9 752 aa11.87□□□□□ -0.51
CCDC7-209ENST00000539197 CLUAP1Q96AJ1 413 aa11.87□□□□□ -0.51
CCDC7-209ENST00000539197 BTBD6Q96KE9 485 aa11.87□□□□□ -0.51
CCDC7-209ENST00000539197 SPOCK3Q9BQ16 436 aa11.87□□□□□ -0.51
CCDC7-209ENST00000539197 KRBA1A5PL33 1030 aa11.86□□□□□ -0.51
CCDC7-209ENST00000539197 GRIN2CQ14957 1233 aa11.86□□□□□ -0.51
CCDC7-209ENST00000539197 FAM182BQ5T319 152 aa11.86□□□□□ -0.51
CCDC7-209ENST00000539197 NOS2P35228 1153 aa11.85□□□□□ -0.51
CCDC7-209ENST00000539197 ALYREFQ86V81 257 aaKnown RBP11.85□□□□□ -0.51
CCDC7-209ENST00000539197 TRIM50Q86XT4 487 aa11.85□□□□□ -0.51
CCDC7-209ENST00000539197 PIK3R2O00459 728 aa11.84□□□□□ -0.51
CCDC7-209ENST00000539197 FAM157BP0CG42 384 aa11.84□□□□□ -0.51
CCDC7-209ENST00000539197 PCBP4P57723 403 aaKnown RBP11.84□□□□□ -0.51
CCDC7-209ENST00000539197 FCHSD1Q86WN1 690 aa11.84□□□□□ -0.51
CCDC7-209ENST00000539197 C7orf43Q8WVR3 580 aa11.84□□□□□ -0.51
CCDC7-209ENST00000539197 ZNF232Q9UNY5 417 aa11.84□□□□□ -0.51
CCDC7-209ENST00000539197 PROCP04070 461 aa11.83□□□□□ -0.52
CCDC7-209ENST00000539197 ADH6P28332 368 aa11.83□□□□□ -0.52
CCDC7-209ENST00000539197 TEAD4Q15561 434 aa11.83□□□□□ -0.52
CCDC7-209ENST00000539197 SAMD5Q5TGI4 173 aa11.83□□□□□ -0.52
CCDC7-209ENST00000539197 CCDC102BQ68D86 513 aa11.83□□□□□ -0.52
CCDC7-209ENST00000539197 LRRC69Q6ZNQ3 347 aa11.83□□□□□ -0.52
CCDC7-209ENST00000539197 PLEKHM2Q8IWE5 1019 aa11.83□□□□□ -0.52
CCDC7-209ENST00000539197 AVENQ9NQS1 362 aaPredicted RBP11.83□□□□□ -0.52
CCDC7-209ENST00000539197 EML1O00423 815 aa11.82□□□□□ -0.52
CCDC7-209ENST00000539197 ATP9BO43861 1147 aa11.82□□□□□ -0.52
CCDC7-209ENST00000539197 TSPAN10Q9H1Z9 355 aaPredicted RBP11.82□□□□□ -0.52
CCDC7-209ENST00000539197 EFSO43281 561 aa11.81□□□□□ -0.52
CCDC7-209ENST00000539197 MKRN1Q9UHC7 482 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms