RNA–Protein interactions for RNA: ENST00000538625.1

C2CD3-212, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-212ENST00000538625 RBM42Q9BTD8 480 aaKnown RBP9.78□□□□□ -0.84
C2CD3-212ENST00000538625 GOLGB1Q14789 3259 aaKnown RBP9.78□□□□□ -0.84
C2CD3-212ENST00000538625 PLEKHG2Q9H7P9 1386 aa9.77□□□□□ -0.84
C2CD3-212ENST00000538625 UBR3Q6ZT12 1888 aa9.77□□□□□ -0.85
C2CD3-212ENST00000538625 NEFMP07197 916 aa9.77□□□□□ -0.85
C2CD3-212ENST00000538625 ATXN8OSP0DMR3 200 aa9.77□□□□□ -0.85
C2CD3-212ENST00000538625 CABP4P57796 275 aa9.77□□□□□ -0.85
C2CD3-212ENST00000538625 SULT6B1Q6IMI4 303 aa9.77□□□□□ -0.85
C2CD3-212ENST00000538625 ZNF530Q6P9A1 599 aaPredicted RBP9.77□□□□□ -0.85
C2CD3-212ENST00000538625 PHACTR3Q96KR7 559 aa9.77□□□□□ -0.85
C2CD3-212ENST00000538625 WWC3Q9ULE0 1092 aa9.77□□□□□ -0.85
C2CD3-212ENST00000538625 RRP7AQ9Y3A4 280 aaKnown RBP9.77□□□□□ -0.85
C2CD3-212ENST00000538625 RTCBQ9Y3I0 505 aaKnown RBP9.77□□□□□ -0.85
C2CD3-212ENST00000538625 SUPT16HQ9Y5B9 1047 aaKnown RBP9.77□□□□□ -0.85
C2CD3-212ENST00000538625 MMP10P09238 476 aa9.76□□□□□ -0.85
C2CD3-212ENST00000538625 RIPK4P57078 832 aa9.76□□□□□ -0.85
C2CD3-212ENST00000538625 C1orf141Q5JVX7 400 aa9.76□□□□□ -0.85
C2CD3-212ENST00000538625 AEBP1Q8IUX7 1158 aa9.76□□□□□ -0.85
C2CD3-212ENST00000538625 NLGN1Q8N2Q7 840 aa9.76□□□□□ -0.85
C2CD3-212ENST00000538625 GPBP1L1Q9HC44 474 aaPredicted RBP9.76□□□□□ -0.85
C2CD3-212ENST00000538625 RFC4P35249 363 aa9.75□□□□□ -0.85
C2CD3-212ENST00000538625 LMOD3Q0VAK6 560 aa9.75□□□□□ -0.85
C2CD3-212ENST00000538625 NEUROD2Q15784 382 aa9.75□□□□□ -0.85
C2CD3-212ENST00000538625 RC3H1Q5TC82 1133 aaKnown RBP9.75□□□□□ -0.85
C2CD3-212ENST00000538625 ERICH6BQ5W0A0 696 aa9.75□□□□□ -0.85
C2CD3-212ENST00000538625 RCAN3Q9UKA8 241 aa9.75□□□□□ -0.85
C2CD3-212ENST00000538625 ATP10DQ9P241 1426 aa9.74□□□□□ -0.85
C2CD3-212ENST00000538625 ZNF526Q8TF50 670 aaPredicted RBP9.74□□□□□ -0.85
C2CD3-212ENST00000538625 ARHGEF1Q92888 912 aaKnown RBP9.74□□□□□ -0.85
C2CD3-212ENST00000538625 SLC4A9Q96Q91 983 aa9.74□□□□□ -0.85
C2CD3-212ENST00000538625 PTCD1O75127 700 aaKnown RBP9.73□□□□□ -0.85
C2CD3-212ENST00000538625 RPS6KA4O75676 772 aa9.73□□□□□ -0.85
C2CD3-212ENST00000538625 TGFB2P61812 414 aa9.73□□□□□ -0.85
C2CD3-212ENST00000538625 CALD1Q05682 793 aaKnown RBP9.73□□□□□ -0.85
C2CD3-212ENST00000538625 NFATC2IPQ8NCF5 419 aa9.73□□□□□ -0.85
C2CD3-212ENST00000538625 MYH16Q9H6N6 1097 aa9.73□□□□□ -0.85
C2CD3-212ENST00000538625 CNTNAP4Q9C0A0 1308 aa9.73□□□□□ -0.85
C2CD3-212ENST00000538625 HTATSF1O43719 755 aaKnown RBP9.72□□□□□ -0.85
C2CD3-212ENST00000538625 NEFLP07196 543 aa9.72□□□□□ -0.85
C2CD3-212ENST00000538625 CT47B1P0C2W7 299 aaPredicted RBP9.72□□□□□ -0.85
C2CD3-212ENST00000538625 ZNF853P0CG23 659 aa9.72□□□□□ -0.85
C2CD3-212ENST00000538625 GAS2L2Q8NHY3 880 aa9.72□□□□□ -0.85
C2CD3-212ENST00000538625 CCDC87Q9NVE4 849 aa9.72□□□□□ -0.85
C2CD3-212ENST00000538625 PARP3Q9Y6F1 533 aa9.72□□□□□ -0.85
C2CD3-212ENST00000538625 A0A0G2JLW4 131 aa9.71□□□□□ -0.86
C2CD3-212ENST00000538625 GYS1P13807 737 aa9.71□□□□□ -0.86
C2CD3-212ENST00000538625 RRP1P56182 461 aaKnown RBP9.71□□□□□ -0.86
C2CD3-212ENST00000538625 MTHFSDQ2M296 383 aaKnown RBP9.71□□□□□ -0.86
C2CD3-212ENST00000538625 IFT57Q9NWB7 429 aa9.71□□□□□ -0.86
C2CD3-212ENST00000538625 BCS1LQ9Y276 419 aa9.71□□□□□ -0.86
C2CD3-212ENST00000538625 KDM6AO15550 1401 aaPredicted RBP9.71□□□□□ -0.86
C2CD3-212ENST00000538625 CRKLP46109 303 aaKnown RBP9.7□□□□□ -0.86
C2CD3-212ENST00000538625 FKBP8Q14318 412 aa9.7□□□□□ -0.86
C2CD3-212ENST00000538625 ARHGAP27Q6ZUM4 889 aa9.7□□□□□ -0.86
C2CD3-212ENST00000538625 FANCIQ9NVI1 1328 aa9.7□□□□□ -0.86
C2CD3-212ENST00000538625 ADCY9O60503 1353 aa9.7□□□□□ -0.86
C2CD3-212ENST00000538625 DPEP1P16444 411 aa9.69□□□□□ -0.86
C2CD3-212ENST00000538625 GNAI1P63096 354 aa9.69□□□□□ -0.86
C2CD3-212ENST00000538625 ZNF831Q5JPB2 1677 aa9.69□□□□□ -0.86
C2CD3-212ENST00000538625 AKAP4Q5JQC9 854 aa9.69□□□□□ -0.86
C2CD3-212ENST00000538625 CFAP44Q96MT7 982 aa9.69□□□□□ -0.86
C2CD3-212ENST00000538625 MYH14Q7Z406 1995 aaKnown RBP9.68□□□□□ -0.86
C2CD3-212ENST00000538625 CICQ96RK0 1608 aaPredicted RBP9.68□□□□□ -0.86
C2CD3-212ENST00000538625 PXDNLA1KZ92 1463 aa9.68□□□□□ -0.86
C2CD3-212ENST00000538625 ZPR1O75312 459 aa9.68□□□□□ -0.86
C2CD3-212ENST00000538625 ZNF428Q96B54 188 aa9.68□□□□□ -0.86
C2CD3-212ENST00000538625 SLC52A2Q9HAB3 445 aa9.68□□□□□ -0.86
C2CD3-212ENST00000538625 SRP68Q9UHB9 627 aaKnown RBP9.68□□□□□ -0.86
C2CD3-212ENST00000538625 C10orf71Q711Q0 1435 aa9.67□□□□□ -0.86
C2CD3-212ENST00000538625 CEMIPQ8WUJ3 1361 aa9.67□□□□□ -0.86
C2CD3-212ENST00000538625 USP42Q9H9J4 1324 aaKnown RBP9.67□□□□□ -0.86
C2CD3-212ENST00000538625 GNAT3A8MTJ3 354 aa9.67□□□□□ -0.86
C2CD3-212ENST00000538625 CHL1O00533 1208 aa9.67□□□□□ -0.86
C2CD3-212ENST00000538625 HSPA6P17066 643 aa9.67□□□□□ -0.86
C2CD3-212ENST00000538625 RARSP54136 660 aaKnown RBP9.67□□□□□ -0.86
C2CD3-212ENST00000538625 INTS5Q6P9B9 1019 aaKnown RBP9.67□□□□□ -0.86
C2CD3-212ENST00000538625 DNAJC10Q8IXB1 793 aa9.67□□□□□ -0.86
C2CD3-212ENST00000538625 LGR6Q9HBX8 967 aa9.67□□□□□ -0.86
C2CD3-212ENST00000538625 PIM2Q9P1W9 311 aa9.67□□□□□ -0.86
C2CD3-212ENST00000538625 COL5A3P25940 1745 aaPredicted RBP9.67□□□□□ -0.86
C2CD3-212ENST00000538625 KIF13BQ9NQT8 1826 aa9.66□□□□□ -0.86
C2CD3-212ENST00000538625 N4BP2Q86UW6 1770 aaPredicted RBP9.66□□□□□ -0.86
C2CD3-212ENST00000538625 C4AP0C0L4 1744 aa9.66□□□□□ -0.86
C2CD3-212ENST00000538625 RNMTO43148 476 aaKnown RBP9.66□□□□□ -0.86
C2CD3-212ENST00000538625 BRPF1P55201 1214 aaPredicted RBP9.66□□□□□ -0.86
C2CD3-212ENST00000538625 DALRD3Q5D0E6 543 aaKnown RBP9.66□□□□□ -0.86
C2CD3-212ENST00000538625 TSR2Q969E8 191 aaKnown RBP9.66□□□□□ -0.86
C2CD3-212ENST00000538625 THUMPD2Q9BTF0 503 aaKnown RBP9.66□□□□□ -0.86
C2CD3-212ENST00000538625 BABAM1Q9NWV8 329 aa9.66□□□□□ -0.86
C2CD3-212ENST00000538625 KIF3CO14782 793 aa9.65□□□□□ -0.86
C2CD3-212ENST00000538625 EXOSC9Q06265 439 aaKnown RBP9.65□□□□□ -0.86
C2CD3-212ENST00000538625 DDR1Q08345 913 aa9.65□□□□□ -0.86
C2CD3-212ENST00000538625 SLC39A6Q13433 755 aa9.65□□□□□ -0.86
C2CD3-212ENST00000538625 DCTN1Q14203 1278 aa9.65□□□□□ -0.86
C2CD3-212ENST00000538625 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.65□□□□□ -0.86
C2CD3-212ENST00000538625 RTF1Q92541 710 aaKnown RBP9.65□□□□□ -0.86
C2CD3-212ENST00000538625 MBIPQ9NS73 344 aa9.65□□□□□ -0.86
C2CD3-212ENST00000538625 SCN11AQ9UI33 1791 aa9.65□□□□□ -0.87
C2CD3-212ENST00000538625 CYP19A1P11511 503 aaPredicted RBP9.64□□□□□ -0.87
C2CD3-212ENST00000538625 KCNA3P22001 575 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms