RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 BCS1LQ9Y276 419 aa11.61□□□□□ -0.55
DDB1-212ENST00000538470 SBF1O95248 1867 aa11.61□□□□□ -0.55
DDB1-212ENST00000538470 LAMB4A4D0S4 1761 aa11.6□□□□□ -0.55
DDB1-212ENST00000538470 HEG1Q9ULI3 1381 aa11.6□□□□□ -0.55
DDB1-212ENST00000538470 A0A0G2JLW4 131 aa11.6□□□□□ -0.55
DDB1-212ENST00000538470 POLRMTO00411 1230 aaKnown RBP11.6□□□□□ -0.55
DDB1-212ENST00000538470 STARD3NLO95772 234 aa11.6□□□□□ -0.55
DDB1-212ENST00000538470 DPEP1P16444 411 aa11.6□□□□□ -0.55
DDB1-212ENST00000538470 NARFQ9UHQ1 456 aa11.6□□□□□ -0.55
DDB1-212ENST00000538470 NUDCQ9Y266 331 aa11.6□□□□□ -0.55
DDB1-212ENST00000538470 ZBTB1Q9Y2K1 713 aa11.6□□□□□ -0.55
DDB1-212ENST00000538470 TNRC6CQ9HCJ0 1690 aaKnown RBP11.59□□□□□ -0.55
DDB1-212ENST00000538470 DLG5Q8TDM6 1919 aa11.59□□□□□ -0.55
DDB1-212ENST00000538470 FCHSD2O94868 740 aa11.59□□□□□ -0.55
DDB1-212ENST00000538470 TM4SF1P30408 202 aa11.59□□□□□ -0.55
DDB1-212ENST00000538470 USPL1Q5W0Q7 1092 aa11.59□□□□□ -0.55
DDB1-212ENST00000538470 ZNF790Q6PG37 636 aa11.59□□□□□ -0.55
DDB1-212ENST00000538470 TEX13AQ9BXU3 409 aaPredicted RBP11.59□□□□□ -0.55
DDB1-212ENST00000538470 RSPH6AQ9H0K4 717 aa11.59□□□□□ -0.55
DDB1-212ENST00000538470 ANKRD31Q8N7Z5 1873 aa11.59□□□□□ -0.55
DDB1-212ENST00000538470 A0A087WZG4 1122 aa11.58□□□□□ -0.56
DDB1-212ENST00000538470 PRKAR2BP31323 418 aa11.58□□□□□ -0.56
DDB1-212ENST00000538470 IL17REQ8NFR9 667 aa11.58□□□□□ -0.56
DDB1-212ENST00000538470 PIM2Q9P1W9 311 aa11.58□□□□□ -0.56
DDB1-212ENST00000538470 ARFGEF2Q9Y6D5 1785 aa11.58□□□□□ -0.56
DDB1-212ENST00000538470 COL11A2P13942 1736 aaPredicted RBP11.57□□□□□ -0.56
DDB1-212ENST00000538470 KCNA3P22001 575 aa11.57□□□□□ -0.56
DDB1-212ENST00000538470 PPP2R1AP30153 589 aa11.57□□□□□ -0.56
DDB1-212ENST00000538470 CNGB1Q14028 1251 aaPredicted RBP11.57□□□□□ -0.56
DDB1-212ENST00000538470 DALRD3Q5D0E6 543 aaKnown RBP11.57□□□□□ -0.56
DDB1-212ENST00000538470 FMNL2Q96PY5 1086 aa11.57□□□□□ -0.56
DDB1-212ENST00000538470 TIAM2Q8IVF5 1701 aa11.57□□□□□ -0.56
DDB1-212ENST00000538470 KDM3BQ7LBC6 1761 aa11.56□□□□□ -0.56
DDB1-212ENST00000538470 EIF5P55010 431 aaKnown RBP11.56□□□□□ -0.56
DDB1-212ENST00000538470 NFIXQ14938 502 aa11.56□□□□□ -0.56
DDB1-212ENST00000538470 ZNF526Q8TF50 670 aaPredicted RBP11.56□□□□□ -0.56
DDB1-212ENST00000538470 ZNF496Q96IT1 587 aaPredicted RBP11.56□□□□□ -0.56
DDB1-212ENST00000538470 BCL2L12Q9HB09 334 aa11.56□□□□□ -0.56
DDB1-212ENST00000538470 CARMIL3Q8ND23 1372 aa11.55□□□□□ -0.56
DDB1-212ENST00000538470 U2AF1L5P0DN76 240 aaPredicted RBP11.55□□□□□ -0.56
DDB1-212ENST00000538470 CANXP27824 592 aaKnown RBP11.55□□□□□ -0.56
DDB1-212ENST00000538470 IL6STP40189 918 aaPredicted RBP11.55□□□□□ -0.56
DDB1-212ENST00000538470 U2AF1Q01081 240 aaKnown RBP eCLIP11.55□□□□□ -0.56
DDB1-212ENST00000538470 ARHGAP27Q6ZUM4 889 aa11.55□□□□□ -0.56
DDB1-212ENST00000538470 CACNA1SQ13698 1873 aa11.55□□□□□ -0.56
DDB1-212ENST00000538470 CCDC88AQ3V6T2 1871 aa11.55□□□□□ -0.56
DDB1-212ENST00000538470 DICER1Q9UPY3 1922 aaKnown RBP11.54□□□□□ -0.56
DDB1-212ENST00000538470 BTBD11A6QL63 1104 aa11.54□□□□□ -0.56
DDB1-212ENST00000538470 KIF3CO14782 793 aa11.54□□□□□ -0.56
DDB1-212ENST00000538470 RTF1Q92541 710 aaKnown RBP11.54□□□□□ -0.56
DDB1-212ENST00000538470 PHACTR3Q96KR7 559 aa11.54□□□□□ -0.56
DDB1-212ENST00000538470 ZC3H4Q9UPT8 1303 aaKnown RBP11.54□□□□□ -0.56
DDB1-212ENST00000538470 HTATSF1O43719 755 aaKnown RBP11.53□□□□□ -0.56
DDB1-212ENST00000538470 SERPINB2P05120 415 aa11.53□□□□□ -0.56
DDB1-212ENST00000538470 HSPA6P17066 643 aa11.53□□□□□ -0.56
DDB1-212ENST00000538470 CHRNA5P30532 468 aa11.53□□□□□ -0.56
DDB1-212ENST00000538470 NPM2Q86SE8 214 aaKnown RBP11.53□□□□□ -0.56
DDB1-212ENST00000538470 PDZRN3Q9UPQ7 1066 aa11.53□□□□□ -0.56
DDB1-212ENST00000538470 FER1L6Q2WGJ9 1857 aa11.53□□□□□ -0.56
DDB1-212ENST00000538470 C9orf131Q5VYM1 1079 aa11.52□□□□□ -0.57
DDB1-212ENST00000538470 CEP350Q5VT06 3117 aa11.52□□□□□ -0.57
DDB1-212ENST00000538470 RGL2O15211 777 aa11.51□□□□□ -0.57
DDB1-212ENST00000538470 NEFMP07197 916 aa11.51□□□□□ -0.57
DDB1-212ENST00000538470 RNF181Q9P0P0 153 aa11.51□□□□□ -0.57
DDB1-212ENST00000538470 KDM2BQ8NHM5 1336 aa11.51□□□□□ -0.57
DDB1-212ENST00000538470 WDR90Q96KV7 1748 aa11.51□□□□□ -0.57
DDB1-212ENST00000538470 CAMTA2O94983 1202 aa11.5□□□□□ -0.57
DDB1-212ENST00000538470 SNRPA1P09661 255 aaKnown RBP11.5□□□□□ -0.57
DDB1-212ENST00000538470 TBC1D9BQ66K14 1250 aa11.5□□□□□ -0.57
DDB1-212ENST00000538470 MCM10Q7L590 875 aa11.5□□□□□ -0.57
DDB1-212ENST00000538470 C2CD5Q86YS7 1000 aa11.5□□□□□ -0.57
DDB1-212ENST00000538470 TTLL6Q8N841 843 aa11.5□□□□□ -0.57
DDB1-212ENST00000538470 ZNF330Q9Y3S2 320 aaPredicted RBP11.5□□□□□ -0.57
DDB1-212ENST00000538470 H0YIN7 160 aa11.49□□□□□ -0.57
DDB1-212ENST00000538470 TOMM70O94826 608 aa11.49□□□□□ -0.57
DDB1-212ENST00000538470 A1BGP04217 495 aa11.49□□□□□ -0.57
DDB1-212ENST00000538470 PDE6BP35913 854 aa11.49□□□□□ -0.57
DDB1-212ENST00000538470 BICDL1Q6ZP65 573 aa11.49□□□□□ -0.57
DDB1-212ENST00000538470 DZIP3Q86Y13 1208 aaKnown RBP11.49□□□□□ -0.57
DDB1-212ENST00000538470 BRIP1Q9BX63 1249 aa11.49□□□□□ -0.57
DDB1-212ENST00000538470 ZNF652Q9Y2D9 606 aa11.49□□□□□ -0.57
DDB1-212ENST00000538470 KCNQ3O43525 872 aa11.48□□□□□ -0.57
DDB1-212ENST00000538470 LMNB1P20700 586 aa11.48□□□□□ -0.57
DDB1-212ENST00000538470 ST5P78524 1137 aa11.48□□□□□ -0.57
DDB1-212ENST00000538470 PRR5LQ6MZQ0 368 aa11.48□□□□□ -0.57
DDB1-212ENST00000538470 CLEC4GQ6UXB4 293 aa11.48□□□□□ -0.57
DDB1-212ENST00000538470 CNBD1Q8NA66 436 aa11.48□□□□□ -0.57
DDB1-212ENST00000538470 RBM46Q8TBY0 533 aaKnown RBP11.48□□□□□ -0.57
DDB1-212ENST00000538470 SETDB2Q96T68 719 aa11.48□□□□□ -0.57
DDB1-212ENST00000538470 PNNQ9H307 717 aaKnown RBP11.48□□□□□ -0.57
DDB1-212ENST00000538470 NMRK2Q9NPI5 230 aa11.48□□□□□ -0.57
DDB1-212ENST00000538470 TBC1D2BQ9UPU7 963 aa11.48□□□□□ -0.57
DDB1-212ENST00000538470 NUP98P52948 1817 aa11.48□□□□□ -0.57
DDB1-212ENST00000538470 APLP1P51693 650 aa11.47□□□□□ -0.57
DDB1-212ENST00000538470 RASSF7Q02833 373 aa11.47□□□□□ -0.57
DDB1-212ENST00000538470 TAF7Q15545 349 aaPredicted RBP11.47□□□□□ -0.57
DDB1-212ENST00000538470 C16orf71Q8IYS4 520 aaPredicted RBP11.47□□□□□ -0.57
DDB1-212ENST00000538470 PNISRQ8TF01 805 aaKnown RBP11.47□□□□□ -0.57
DDB1-212ENST00000538470 USP16Q9Y5T5 823 aa11.47□□□□□ -0.57
DDB1-212ENST00000538470 SLX4Q8IY92 1834 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms