RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 MTRQ99707 1265 aa13.07□□□□□ -0.32
CD9-207ENST00000538418 NIF3L1Q9GZT8 377 aa13.07□□□□□ -0.32
CD9-207ENST00000538418 ETNK1Q9HBU6 452 aa13.07□□□□□ -0.32
CD9-207ENST00000538418 CUEDC1Q9NWM3 386 aaPredicted RBP13.07□□□□□ -0.32
CD9-207ENST00000538418 NLRP2Q9NX02 1062 aa13.07□□□□□ -0.32
CD9-207ENST00000538418 MAP4K5Q9Y4K4 846 aa13.07□□□□□ -0.32
CD9-207ENST00000538418 SMARCA2P51531 1590 aa13.07□□□□□ -0.32
CD9-207ENST00000538418 FOXK2Q01167 660 aa13.06□□□□□ -0.32
CD9-207ENST00000538418 ENOX2Q16206 610 aaKnown RBP13.06□□□□□ -0.32
CD9-207ENST00000538418 ALG1LQ6GMV1 187 aa13.06□□□□□ -0.32
CD9-207ENST00000538418 HS3ST6Q96QI5 342 aa13.06□□□□□ -0.32
CD9-207ENST00000538418 ATP2B1P20020 1258 aa13.05□□□□□ -0.32
CD9-207ENST00000538418 TRIM52Q96A61 297 aa13.05□□□□□ -0.32
CD9-207ENST00000538418 OTUD5Q96G74 571 aa13.05□□□□□ -0.32
CD9-207ENST00000538418 LNPKQ9C0E8 428 aa13.05□□□□□ -0.32
CD9-207ENST00000538418 ACBD3Q9H3P7 528 aa13.05□□□□□ -0.32
CD9-207ENST00000538418 ERCC6Q03468 1493 aa13.04□□□□□ -0.32
CD9-207ENST00000538418 GNL2Q13823 731 aaKnown RBP13.04□□□□□ -0.32
CD9-207ENST00000538418 NOP9Q86U38 636 aaKnown RBP13.04□□□□□ -0.32
CD9-207ENST00000538418 SLC9A9Q8IVB4 645 aa13.04□□□□□ -0.32
CD9-207ENST00000538418 DHX38Q92620 1227 aaKnown RBP13.04□□□□□ -0.32
CD9-207ENST00000538418 QTRT2Q9H974 415 aaKnown RBP13.04□□□□□ -0.32
CD9-207ENST00000538418 SCHIP1Q9P0W5 487 aaPredicted RBP13.04□□□□□ -0.32
CD9-207ENST00000538418 LRFN2Q9ULH4 789 aa13.04□□□□□ -0.32
CD9-207ENST00000538418 PNMA6FA0A0J9YX94 578 aa13.03□□□□□ -0.32
CD9-207ENST00000538418 POTEB3A0JP26 581 aa13.03□□□□□ -0.32
CD9-207ENST00000538418 TBCELQ5QJ74 424 aa13.03□□□□□ -0.32
CD9-207ENST00000538418 POTEBQ6S5H4 581 aa13.03□□□□□ -0.32
CD9-207ENST00000538418 HMGXB3Q12766 1538 aa13.03□□□□□ -0.32
CD9-207ENST00000538418 ZBTB39O15060 712 aa13.02□□□□□ -0.33
CD9-207ENST00000538418 ANKRD13DQ6ZTN6 518 aa13.02□□□□□ -0.33
CD9-207ENST00000538418 NYAP1Q6ZVC0 841 aa13.02□□□□□ -0.33
CD9-207ENST00000538418 ARMC5Q96C12 935 aa13.02□□□□□ -0.33
CD9-207ENST00000538418 MYO19Q96H55 970 aa13.02□□□□□ -0.33
CD9-207ENST00000538418 CYLDQ9NQC7 956 aa13.02□□□□□ -0.33
CD9-207ENST00000538418 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.02□□□□□ -0.33
CD9-207ENST00000538418 EMILIN1Q9Y6C2 1016 aa13.02□□□□□ -0.33
CD9-207ENST00000538418 S1PR4O95977 384 aa13.01□□□□□ -0.33
CD9-207ENST00000538418 BRD2P25440 801 aaKnown RBP13.01□□□□□ -0.33
CD9-207ENST00000538418 VARSP26640 1264 aaKnown RBP13.01□□□□□ -0.33
CD9-207ENST00000538418 GNA15P30679 374 aa13.01□□□□□ -0.33
CD9-207ENST00000538418 GTF2F1P35269 517 aaKnown RBP eCLIP13.01□□□□□ -0.33
CD9-207ENST00000538418 ATCAYQ86WG3 371 aa13.01□□□□□ -0.33
CD9-207ENST00000538418 GJD3Q8N144 294 aa13.01□□□□□ -0.33
CD9-207ENST00000538418 ZNF516Q92618 1163 aa13.01□□□□□ -0.33
CD9-207ENST00000538418 TMPRSS4Q9NRS4 437 aa13.01□□□□□ -0.33
CD9-207ENST00000538418 POLIQ9UNA4 740 aa13.01□□□□□ -0.33
CD9-207ENST00000538418 ANKRD62A6NC57 917 aa13□□□□□ -0.33
CD9-207ENST00000538418 A6NJY4 79 aa13□□□□□ -0.33
CD9-207ENST00000538418 PSMA6P60900 246 aaKnown RBP13□□□□□ -0.33
CD9-207ENST00000538418 THSD4Q6ZMP0 1018 aa13□□□□□ -0.33
CD9-207ENST00000538418 GMLQ99445 158 aa13□□□□□ -0.33
CD9-207ENST00000538418 IL21Q9HBE4 155 aa13□□□□□ -0.33
CD9-207ENST00000538418 USP5P45974 858 aa12.99□□□□□ -0.33
CD9-207ENST00000538418 TNNI2P48788 182 aa12.99□□□□□ -0.33
CD9-207ENST00000538418 MTFR1Q15390 333 aa12.99□□□□□ -0.33
CD9-207ENST00000538418 ESCO1Q5FWF5 840 aa12.99□□□□□ -0.33
CD9-207ENST00000538418 BAZ1AQ9NRL2 1556 aaPredicted RBP12.98□□□□□ -0.33
CD9-207ENST00000538418 GNRH1P01148 92 aa12.98□□□□□ -0.33
CD9-207ENST00000538418 SMTNP53814 917 aa12.98□□□□□ -0.33
CD9-207ENST00000538418 FAM26DQ5JW98 314 aa12.98□□□□□ -0.33
CD9-207ENST00000538418 ANKRD13AQ8IZ07 590 aa12.98□□□□□ -0.33
CD9-207ENST00000538418 HIRIP3Q9BW71 556 aaPredicted RBP12.98□□□□□ -0.33
CD9-207ENST00000538418 CHMP3Q9Y3E7 222 aa12.98□□□□□ -0.33
CD9-207ENST00000538418 MZF1P28698 734 aaPredicted RBP12.97□□□□□ -0.33
CD9-207ENST00000538418 DNAJA1P31689 397 aaKnown RBP12.97□□□□□ -0.33
CD9-207ENST00000538418 DHX9Q08211 1270 aaKnown RBP12.97□□□□□ -0.33
CD9-207ENST00000538418 TJAP1Q5JTD0 557 aa12.97□□□□□ -0.33
CD9-207ENST00000538418 CYP2U1Q7Z449 544 aa12.97□□□□□ -0.33
CD9-207ENST00000538418 FBF1Q8TES7 1133 aa12.97□□□□□ -0.33
CD9-207ENST00000538418 IQSEC3Q9UPP2 1182 aaPredicted RBP12.97□□□□□ -0.33
CD9-207ENST00000538418 SMARCA4P51532 1647 aa12.97□□□□□ -0.33
CD9-207ENST00000538418 ZNF784Q8NCA9 323 aaPredicted RBP12.96□□□□□ -0.33
CD9-207ENST00000538418 CRELD1Q96HD1 420 aa12.96□□□□□ -0.33
CD9-207ENST00000538418 CFHR5Q9BXR6 569 aa12.96□□□□□ -0.33
CD9-207ENST00000538418 AK5Q9Y6K8 562 aa12.96□□□□□ -0.33
CD9-207ENST00000538418 DNM1Q05193 864 aaKnown RBP12.95□□□□□ -0.34
CD9-207ENST00000538418 EDEM1Q92611 657 aa12.95□□□□□ -0.34
CD9-207ENST00000538418 FRMD6Q96NE9 622 aa12.95□□□□□ -0.34
CD9-207ENST00000538418 TMA7Q9Y2S6 64 aaKnown RBP12.95□□□□□ -0.34
CD9-207ENST00000538418 BAZ1BQ9UIG0 1483 aaKnown RBP12.94□□□□□ -0.34
CD9-207ENST00000538418 CCDC144BQ3MJ40 725 aa12.94□□□□□ -0.34
CD9-207ENST00000538418 POTEAQ6S8J7 498 aa12.94□□□□□ -0.34
CD9-207ENST00000538418 CSRNP1Q96S65 589 aa12.94□□□□□ -0.34
CD9-207ENST00000538418 PEG3Q9GZU2 1588 aa12.94□□□□□ -0.34
CD9-207ENST00000538418 ZBTB24O43167 697 aaPredicted RBP12.93□□□□□ -0.34
CD9-207ENST00000538418 CTSHP09668 335 aa12.93□□□□□ -0.34
CD9-207ENST00000538418 ARID5BQ14865 1188 aa12.93□□□□□ -0.34
CD9-207ENST00000538418 NGLY1Q96IV0 654 aa12.93□□□□□ -0.34
CD9-207ENST00000538418 INPP5FQ9Y2H2 1132 aa12.93□□□□□ -0.34
CD9-207ENST00000538418 CDK2AP1O14519 115 aa12.92□□□□□ -0.34
CD9-207ENST00000538418 PDGFAP04085 211 aa12.92□□□□□ -0.34
CD9-207ENST00000538418 FSHRP23945 695 aa12.92□□□□□ -0.34
CD9-207ENST00000538418 ARID5AQ03989 594 aa12.92□□□□□ -0.34
CD9-207ENST00000538418 ETFBKMTQ8IXQ9 262 aa12.92□□□□□ -0.34
CD9-207ENST00000538418 NKX2-3Q8TAU0 364 aa12.92□□□□□ -0.34
CD9-207ENST00000538418 DDX41Q9UJV9 622 aaKnown RBP12.92□□□□□ -0.34
CD9-207ENST00000538418 TLDC2A0PJX2 215 aa12.91□□□□□ -0.34
CD9-207ENST00000538418 LILRA1O75019 489 aa12.91□□□□□ -0.34
CD9-207ENST00000538418 SKOR1P84550 965 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms