RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 TTC5Q8N0Z6 440 aa26.38■■□□□ 1.81
COPS7A-208ENST00000538410 HOXB7P09629 217 aa26.37■■□□□ 1.81
COPS7A-208ENST00000538410 BRPF1P55201 1214 aaPredicted RBP26.37■■□□□ 1.81
COPS7A-208ENST00000538410 MRPL50Q8N5N7 158 aaKnown RBP26.36■■□□□ 1.81
COPS7A-208ENST00000538410 PIGBQ92521 554 aa26.36■■□□□ 1.81
COPS7A-208ENST00000538410 FRAT1Q92837 279 aaPredicted RBP26.35■■□□□ 1.81
COPS7A-208ENST00000538410 LAMB4A4D0S4 1761 aa26.34■■□□□ 1.81
COPS7A-208ENST00000538410 TCERG1O14776 1098 aaKnown RBP26.34■■□□□ 1.81
COPS7A-208ENST00000538410 GIGYF1O75420 1035 aaPredicted RBP26.34■■□□□ 1.81
COPS7A-208ENST00000538410 CANXP27824 592 aaKnown RBP26.34■■□□□ 1.81
COPS7A-208ENST00000538410 KCNQ4P56696 695 aa26.34■■□□□ 1.81
COPS7A-208ENST00000538410 ZNF827Q17R98 1081 aa26.34■■□□□ 1.81
COPS7A-208ENST00000538410 ZNF496Q96IT1 587 aaPredicted RBP26.34■■□□□ 1.81
COPS7A-208ENST00000538410 PPP1R1BQ9UD71 204 aaPredicted RBP26.34■■□□□ 1.81
COPS7A-208ENST00000538410 CCNL1Q9UK58 526 aaPredicted RBP26.34■■□□□ 1.81
COPS7A-208ENST00000538410 KCPQ6ZWJ8 1503 aa26.34■■□□□ 1.81
COPS7A-208ENST00000538410 KIF16BQ96L93 1317 aa26.33■■□□□ 1.81
COPS7A-208ENST00000538410 ZBTB7AO95365 584 aa26.33■■□□□ 1.81
COPS7A-208ENST00000538410 CCDC30Q5VVM6 783 aa26.32■■□□□ 1.8
COPS7A-208ENST00000538410 AKT1S1Q96B36 256 aa26.32■■□□□ 1.8
COPS7A-208ENST00000538410 FMNL2Q96PY5 1086 aa26.32■■□□□ 1.8
COPS7A-208ENST00000538410 CHMP4AQ9BY43 222 aa26.32■■□□□ 1.8
COPS7A-208ENST00000538410 NOB1Q9ULX3 412 aaKnown RBP26.31■■□□□ 1.8
COPS7A-208ENST00000538410 HDGFL1Q5TGJ6 251 aa26.3■■□□□ 1.8
COPS7A-208ENST00000538410 ZKSCAN2Q63HK3 967 aa26.3■■□□□ 1.8
COPS7A-208ENST00000538410 QSER1Q2KHR3 1735 aa26.29■■□□□ 1.8
COPS7A-208ENST00000538410 C20orf194Q5TEA3 1177 aa26.29■■□□□ 1.8
COPS7A-208ENST00000538410 ATF5Q9Y2D1 282 aaPredicted RBP26.29■■□□□ 1.8
COPS7A-208ENST00000538410 PALLDQ8WX93 1383 aa26.29■■□□□ 1.8
COPS7A-208ENST00000538410 IPO8O15397 1037 aaKnown RBP26.28■■□□□ 1.8
COPS7A-208ENST00000538410 SMARCC1Q92922 1105 aaPredicted RBP26.28■■□□□ 1.8
COPS7A-208ENST00000538410 STK31Q9BXU1 1019 aa26.28■■□□□ 1.8
COPS7A-208ENST00000538410 PRAMEF22A3QJZ6 481 aa26.28■■□□□ 1.8
COPS7A-208ENST00000538410 SNRPA1P09661 255 aaKnown RBP26.28■■□□□ 1.8
COPS7A-208ENST00000538410 EIF2S2P20042 333 aaKnown RBP26.28■■□□□ 1.8
COPS7A-208ENST00000538410 PDE3AQ14432 1141 aa26.28■■□□□ 1.8
COPS7A-208ENST00000538410 NECTIN2Q92692 538 aa26.28■■□□□ 1.8
COPS7A-208ENST00000538410 MTFR1LQ9H019 292 aa26.28■■□□□ 1.8
COPS7A-208ENST00000538410 ATG3Q9NT62 314 aa26.28■■□□□ 1.8
COPS7A-208ENST00000538410 TFCP2L1Q9NZI6 479 aa26.28■■□□□ 1.8
COPS7A-208ENST00000538410 ASAP1Q9ULH1 1129 aa26.28■■□□□ 1.8
COPS7A-208ENST00000538410 SLC4A2P04920 1241 aa26.27■■□□□ 1.8
COPS7A-208ENST00000538410 ERICH6BQ5W0A0 696 aa26.26■■□□□ 1.79
COPS7A-208ENST00000538410 ARHGAP45Q92619 1136 aa26.26■■□□□ 1.79
COPS7A-208ENST00000538410 TUBGCP6Q96RT7 1819 aa26.26■■□□□ 1.79
COPS7A-208ENST00000538410 HMGB2P26583 209 aaKnown RBP26.25■■□□□ 1.79
COPS7A-208ENST00000538410 ATF7IPQ6VMQ6 1270 aa26.25■■□□□ 1.79
COPS7A-208ENST00000538410 TAF1LQ8IZX4 1826 aa26.24■■□□□ 1.79
COPS7A-208ENST00000538410 PTCD1O75127 700 aaKnown RBP26.24■■□□□ 1.79
COPS7A-208ENST00000538410 MS4A1P11836 297 aa26.24■■□□□ 1.79
COPS7A-208ENST00000538410 TRIM27P14373 513 aa26.24■■□□□ 1.79
COPS7A-208ENST00000538410 PTGER2P43116 358 aa26.24■■□□□ 1.79
COPS7A-208ENST00000538410 TNNQ9UQP3 1299 aa26.24■■□□□ 1.79
COPS7A-208ENST00000538410 CRBNQ96SW2 442 aa26.22■■□□□ 1.79
COPS7A-208ENST00000538410 PNPLA7Q6ZV29 1317 aa26.22■■□□□ 1.79
COPS7A-208ENST00000538410 DZIP1LQ8IYY4 767 aaKnown RBP26.21■■□□□ 1.79
COPS7A-208ENST00000538410 PANK1Q8TE04 598 aa26.21■■□□□ 1.79
COPS7A-208ENST00000538410 CHPF2Q9P2E5 772 aa26.21■■□□□ 1.79
COPS7A-208ENST00000538410 PTPRCP08575 1304 aa26.21■■□□□ 1.79
COPS7A-208ENST00000538410 G2E3Q7L622 706 aa26.21■■□□□ 1.79
COPS7A-208ENST00000538410 VSIG10Q8N0Z9 540 aa26.21■■□□□ 1.79
COPS7A-208ENST00000538410 SLC16A10Q8TF71 515 aa26.21■■□□□ 1.79
COPS7A-208ENST00000538410 CLUAP1Q96AJ1 413 aa26.21■■□□□ 1.79
COPS7A-208ENST00000538410 DBF4Q9UBU7 674 aaPredicted RBP26.21■■□□□ 1.79
COPS7A-208ENST00000538410 USP16Q9Y5T5 823 aa26.21■■□□□ 1.79
COPS7A-208ENST00000538410 RLBP1P12271 317 aa26.2■■□□□ 1.78
COPS7A-208ENST00000538410 EXOC6Q8TAG9 804 aa26.2■■□□□ 1.78
COPS7A-208ENST00000538410 TJP1Q07157 1748 aa26.2■■□□□ 1.78
COPS7A-208ENST00000538410 FTSJ3Q8IY81 847 aaKnown RBP26.19■■□□□ 1.78
COPS7A-208ENST00000538410 API5Q9BZZ5 524 aaKnown RBP26.19■■□□□ 1.78
COPS7A-208ENST00000538410 RBM42Q9BTD8 480 aaKnown RBP26.18■■□□□ 1.78
COPS7A-208ENST00000538410 CICQ96RK0 1608 aaPredicted RBP26.18■■□□□ 1.78
COPS7A-208ENST00000538410 SGIP1Q9BQI5 828 aa26.17■■□□□ 1.78
COPS7A-208ENST00000538410 ZNF831Q5JPB2 1677 aa26.17■■□□□ 1.78
COPS7A-208ENST00000538410 LOC102724428A0A0B4J2F2 783 aa26.17■■□□□ 1.78
COPS7A-208ENST00000538410 SIK1P57059 783 aa26.17■■□□□ 1.78
COPS7A-208ENST00000538410 FLIIQ13045 1269 aa26.17■■□□□ 1.78
COPS7A-208ENST00000538410 DDX21Q9NR30 783 aaKnown RBP eCLIP26.17■■□□□ 1.78
COPS7A-208ENST00000538410 TEX13AQ9BXU3 409 aaPredicted RBP26.16■■□□□ 1.78
COPS7A-208ENST00000538410 COG6Q9Y2V7 657 aa26.16■■□□□ 1.78
COPS7A-208ENST00000538410 C4BP0C0L5 1744 aa26.16■■□□□ 1.78
COPS7A-208ENST00000538410 ABCC4O15439 1325 aa26.15■■□□□ 1.78
COPS7A-208ENST00000538410 PDIA6Q15084 440 aa26.15■■□□□ 1.78
COPS7A-208ENST00000538410 PHAXQ9H814 394 aaKnown RBP26.15■■□□□ 1.78
COPS7A-208ENST00000538410 N4BP2Q86UW6 1770 aaPredicted RBP26.15■■□□□ 1.78
COPS7A-208ENST00000538410 MSH5O43196 834 aa26.14■■□□□ 1.78
COPS7A-208ENST00000538410 ANXA1P04083 346 aa26.14■■□□□ 1.78
COPS7A-208ENST00000538410 HYPKQ9NX55 129 aa26.14■■□□□ 1.78
COPS7A-208ENST00000538410 ERBB4Q15303 1308 aa26.14■■□□□ 1.77
COPS7A-208ENST00000538410 PROSER3Q2NL68 480 aa26.14■■□□□ 1.77
COPS7A-208ENST00000538410 COL23A1Q86Y22 540 aaPredicted RBP26.14■■□□□ 1.77
COPS7A-208ENST00000538410 SLC4A9Q96Q91 983 aa26.14■■□□□ 1.77
COPS7A-208ENST00000538410 ARXQ96QS3 562 aa26.13■■□□□ 1.77
COPS7A-208ENST00000538410 COL24A1Q17RW2 1714 aa26.12■■□□□ 1.77
COPS7A-208ENST00000538410 FKBP5Q13451 457 aaPredicted RBP26.12■■□□□ 1.77
COPS7A-208ENST00000538410 MVPQ14764 893 aaKnown RBP26.12■■□□□ 1.77
COPS7A-208ENST00000538410 DNAJC10Q8IXB1 793 aa26.12■■□□□ 1.77
COPS7A-208ENST00000538410 TMEM57Q8N5G2 664 aa26.12■■□□□ 1.77
COPS7A-208ENST00000538410 AK7Q96M32 723 aa26.12■■□□□ 1.77
COPS7A-208ENST00000538410 POLD1P28340 1107 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms