RNA–Protein interactions for RNA: ENST00000538361.1

C2CD3-211, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 863 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-211ENST00000538361 HEG1Q9ULI3 1381 aa17.63■□□□□ 0.41
C2CD3-211ENST00000538361 MYBBP1AQ9BQG0 1328 aaKnown RBP17.62■□□□□ 0.41
C2CD3-211ENST00000538361 SRP68Q9UHB9 627 aaKnown RBP17.61■□□□□ 0.41
C2CD3-211ENST00000538361 ZBTB1Q9Y2K1 713 aa17.61■□□□□ 0.41
C2CD3-211ENST00000538361 MAPK8IP3Q9UPT6 1336 aa17.61■□□□□ 0.41
C2CD3-211ENST00000538361 YBX3P16989 372 aaKnown RBP eCLIP17.6■□□□□ 0.41
C2CD3-211ENST00000538361 CANXP27824 592 aaKnown RBP17.6■□□□□ 0.41
C2CD3-211ENST00000538361 PLEKHF1Q96S99 279 aa17.6■□□□□ 0.41
C2CD3-211ENST00000538361 COL15A1P39059 1388 aa17.6■□□□□ 0.41
C2CD3-211ENST00000538361 DLG5Q8TDM6 1919 aa17.59■□□□□ 0.41
C2CD3-211ENST00000538361 A0A087WZG4 1122 aa17.59■□□□□ 0.41
C2CD3-211ENST00000538361 TGFB2P61812 414 aa17.59■□□□□ 0.41
C2CD3-211ENST00000538361 DCTN1Q14203 1278 aa17.59■□□□□ 0.41
C2CD3-211ENST00000538361 FKBP8Q14318 412 aa17.59■□□□□ 0.41
C2CD3-211ENST00000538361 TAF7Q15545 349 aaPredicted RBP17.59■□□□□ 0.41
C2CD3-211ENST00000538361 NFE2L2Q16236 605 aa17.59■□□□□ 0.41
C2CD3-211ENST00000538361 NARFQ9UHQ1 456 aa17.59■□□□□ 0.41
C2CD3-211ENST00000538361 KIF13BQ9NQT8 1826 aa17.58■□□□□ 0.41
C2CD3-211ENST00000538361 USPL1Q5W0Q7 1092 aa17.58■□□□□ 0.4
C2CD3-211ENST00000538361 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
C2CD3-211ENST00000538361 KCNQ3O43525 872 aa17.57■□□□□ 0.4
C2CD3-211ENST00000538361 SNRPA1P09661 255 aaKnown RBP17.56■□□□□ 0.4
C2CD3-211ENST00000538361 IL6STP40189 918 aaPredicted RBP17.56■□□□□ 0.4
C2CD3-211ENST00000538361 EIF5P55010 431 aaKnown RBP17.56■□□□□ 0.4
C2CD3-211ENST00000538361 PNISRQ8TF01 805 aaKnown RBP17.56■□□□□ 0.4
C2CD3-211ENST00000538361 C10orf71Q711Q0 1435 aa17.55■□□□□ 0.4
C2CD3-211ENST00000538361 TM4SF1P30408 202 aa17.55■□□□□ 0.4
C2CD3-211ENST00000538361 ZNF330Q9Y3S2 320 aaPredicted RBP17.54■□□□□ 0.4
C2CD3-211ENST00000538361 N4BP2Q86UW6 1770 aaPredicted RBP17.53■□□□□ 0.4
C2CD3-211ENST00000538361 A0A0G2JLW4 131 aa17.53■□□□□ 0.4
C2CD3-211ENST00000538361 POLRMTO00411 1230 aaKnown RBP17.53■□□□□ 0.4
C2CD3-211ENST00000538361 A1BGP04217 495 aa17.53■□□□□ 0.4
C2CD3-211ENST00000538361 DDR1Q08345 913 aa17.53■□□□□ 0.4
C2CD3-211ENST00000538361 WDR43Q15061 677 aaKnown RBP eCLIP17.53■□□□□ 0.4
C2CD3-211ENST00000538361 PRKRIP1Q9H875 184 aaPredicted RBP17.53■□□□□ 0.4
C2CD3-211ENST00000538361 USP16Q9Y5T5 823 aa17.53■□□□□ 0.4
C2CD3-211ENST00000538361 PXDNLA1KZ92 1463 aa17.52■□□□□ 0.4
C2CD3-211ENST00000538361 NFIXQ14938 502 aa17.52■□□□□ 0.4
C2CD3-211ENST00000538361 ZNF784Q8NCA9 323 aaPredicted RBP17.52■□□□□ 0.4
C2CD3-211ENST00000538361 RIPK4P57078 832 aa17.51■□□□□ 0.39
C2CD3-211ENST00000538361 LMOD3Q0VAK6 560 aa17.51■□□□□ 0.39
C2CD3-211ENST00000538361 BCL2L12Q9HB09 334 aa17.51■□□□□ 0.39
C2CD3-211ENST00000538361 MIS18AQ9NYP9 233 aa17.51■□□□□ 0.39
C2CD3-211ENST00000538361 WWC3Q9ULE0 1092 aa17.51■□□□□ 0.39
C2CD3-211ENST00000538361 KIAA1551Q9HCM1 1747 aa17.5■□□□□ 0.39
C2CD3-211ENST00000538361 DPEP1P16444 411 aa17.5■□□□□ 0.39
C2CD3-211ENST00000538361 TBC1D2BQ9UPU7 963 aa17.5■□□□□ 0.39
C2CD3-211ENST00000538361 BCS1LQ9Y276 419 aa17.49■□□□□ 0.39
C2CD3-211ENST00000538361 AFDNP55196 1824 aaKnown RBP17.49■□□□□ 0.39
C2CD3-211ENST00000538361 PRAMEF22A3QJZ6 481 aa17.48■□□□□ 0.39
C2CD3-211ENST00000538361 SERPINB2P05120 415 aa17.48■□□□□ 0.39
C2CD3-211ENST00000538361 TMPOP42166 694 aaKnown RBP17.48■□□□□ 0.39
C2CD3-211ENST00000538361 RUNDC1Q96C34 613 aa17.48■□□□□ 0.39
C2CD3-211ENST00000538361 THUMPD2Q9BTF0 503 aaKnown RBP17.48■□□□□ 0.39
C2CD3-211ENST00000538361 PIM2Q9P1W9 311 aa17.48■□□□□ 0.39
C2CD3-211ENST00000538361 KDM3BQ7LBC6 1761 aa17.48■□□□□ 0.39
C2CD3-211ENST00000538361 BICDL1Q6ZP65 573 aa17.47■□□□□ 0.39
C2CD3-211ENST00000538361 DZIP3Q86Y13 1208 aaKnown RBP17.47■□□□□ 0.39
C2CD3-211ENST00000538361 CCDC146Q8IYE0 955 aa17.47■□□□□ 0.39
C2CD3-211ENST00000538361 SCN7AQ01118 1682 aa17.47■□□□□ 0.39
C2CD3-211ENST00000538361 BRCA1P38398 1863 aaKnown RBP17.47■□□□□ 0.39
C2CD3-211ENST00000538361 NRXN2Q9P2S2 1712 aa17.47■□□□□ 0.39
C2CD3-211ENST00000538361 GIGYF1O75420 1035 aaPredicted RBP17.46■□□□□ 0.39
C2CD3-211ENST00000538361 KCNA3P22001 575 aa17.46■□□□□ 0.39
C2CD3-211ENST00000538361 EIF4A1P60842 406 aaKnown RBP17.46■□□□□ 0.39
C2CD3-211ENST00000538361 TBC1D9BQ66K14 1250 aa17.46■□□□□ 0.39
C2CD3-211ENST00000538361 SETDB2Q96T68 719 aa17.46■□□□□ 0.39
C2CD3-211ENST00000538361 BABAM1Q9NWV8 329 aa17.46■□□□□ 0.39
C2CD3-211ENST00000538361 ZNF652Q9Y2D9 606 aa17.46■□□□□ 0.39
C2CD3-211ENST00000538361 LAMB4A4D0S4 1761 aa17.45■□□□□ 0.38
C2CD3-211ENST00000538361 CAMTA2O94983 1202 aa17.45■□□□□ 0.38
C2CD3-211ENST00000538361 DALRD3Q5D0E6 543 aaKnown RBP17.45■□□□□ 0.38
C2CD3-211ENST00000538361 TSPYL4Q9UJ04 414 aa17.45■□□□□ 0.38
C2CD3-211ENST00000538361 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
C2CD3-211ENST00000538361 CARMIL3Q8ND23 1372 aa17.44■□□□□ 0.38
C2CD3-211ENST00000538361 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
C2CD3-211ENST00000538361 NEUROD2Q15784 382 aa17.44■□□□□ 0.38
C2CD3-211ENST00000538361 CLEC4GQ6UXB4 293 aa17.44■□□□□ 0.38
C2CD3-211ENST00000538361 BCORQ6W2J9 1755 aa17.43■□□□□ 0.38
C2CD3-211ENST00000538361 ARFGEF1Q9Y6D6 1849 aa17.43■□□□□ 0.38
C2CD3-211ENST00000538361 ZNF316A6NFI3 1004 aaPredicted RBP17.43■□□□□ 0.38
C2CD3-211ENST00000538361 NBPF26B4DH59 902 aa17.43■□□□□ 0.38
C2CD3-211ENST00000538361 RGL2O15211 777 aa17.43■□□□□ 0.38
C2CD3-211ENST00000538361 NPHP1O15259 732 aa17.43■□□□□ 0.38
C2CD3-211ENST00000538361 CHRNA5P30532 468 aa17.43■□□□□ 0.38
C2CD3-211ENST00000538361 NBPF10Q6P3W6 841 aaKnown RBP17.43■□□□□ 0.38
C2CD3-211ENST00000538361 ARHGAP27Q6ZUM4 889 aa17.43■□□□□ 0.38
C2CD3-211ENST00000538361 NBPF15Q8N660 670 aa17.43■□□□□ 0.38
C2CD3-211ENST00000538361 RRP7AQ9Y3A4 280 aaKnown RBP17.43■□□□□ 0.38
C2CD3-211ENST00000538361 H0YIN7 160 aa17.42■□□□□ 0.38
C2CD3-211ENST00000538361 PDZRN3Q9UPQ7 1066 aa17.42■□□□□ 0.38
C2CD3-211ENST00000538361 PDE6BP35913 854 aa17.4■□□□□ 0.38
C2CD3-211ENST00000538361 C2CD5Q86YS7 1000 aa17.4■□□□□ 0.38
C2CD3-211ENST00000538361 CNBD1Q8NA66 436 aa17.4■□□□□ 0.38
C2CD3-211ENST00000538361 BRIP1Q9BX63 1249 aa17.4■□□□□ 0.38
C2CD3-211ENST00000538361 ST5P78524 1137 aa17.39■□□□□ 0.37
C2CD3-211ENST00000538361 PRR5LQ6MZQ0 368 aa17.39■□□□□ 0.37
C2CD3-211ENST00000538361 ERBB4Q15303 1308 aa17.39■□□□□ 0.37
C2CD3-211ENST00000538361 ATP10DQ9P241 1426 aa17.38■□□□□ 0.37
C2CD3-211ENST00000538361 KIF6Q6ZMV9 814 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms