RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 OVOS2A0A0G2JMS6 1433 aa11.53□□□□□ -0.56
DDB1-211ENST00000538280 UTRNP46939 3433 aa11.53□□□□□ -0.56
DDB1-211ENST00000538280 YY1P25490 414 aa11.53□□□□□ -0.56
DDB1-211ENST00000538280 ABTB2Q8N961 1025 aa11.53□□□□□ -0.56
DDB1-211ENST00000538280 SNX21Q969T3 373 aa11.53□□□□□ -0.56
DDB1-211ENST00000538280 CCT4P50991 539 aaKnown RBP11.52□□□□□ -0.57
DDB1-211ENST00000538280 G2E3Q7L622 706 aa11.52□□□□□ -0.57
DDB1-211ENST00000538280 PLEKHM2Q8IWE5 1019 aa11.52□□□□□ -0.57
DDB1-211ENST00000538280 SIPA1L3O60292 1781 aaPredicted RBP11.51□□□□□ -0.57
DDB1-211ENST00000538280 FRAT2O75474 233 aaPredicted RBP11.51□□□□□ -0.57
DDB1-211ENST00000538280 SLC4A2P04920 1241 aa11.51□□□□□ -0.57
DDB1-211ENST00000538280 GSPT1P15170 499 aaKnown RBP11.51□□□□□ -0.57
DDB1-211ENST00000538280 EVA1CP58658 441 aa11.51□□□□□ -0.57
DDB1-211ENST00000538280 KCNH5Q8NCM2 988 aa11.51□□□□□ -0.57
DDB1-211ENST00000538280 IL17REQ8NFR9 667 aa11.51□□□□□ -0.57
DDB1-211ENST00000538280 MEIS3Q99687 375 aa11.51□□□□□ -0.57
DDB1-211ENST00000538280 ABCC6O95255 1503 aa11.5□□□□□ -0.57
DDB1-211ENST00000538280 ZBTB7CA1YPR0 619 aa11.5□□□□□ -0.57
DDB1-211ENST00000538280 EIF5BO60841 1220 aaKnown RBP11.5□□□□□ -0.57
DDB1-211ENST00000538280 CDC45O75419 566 aa11.5□□□□□ -0.57
DDB1-211ENST00000538280 GCP02774 474 aa11.5□□□□□ -0.57
DDB1-211ENST00000538280 TTC22Q5TAA0 569 aa11.5□□□□□ -0.57
DDB1-211ENST00000538280 TBC1D9Q6ZT07 1266 aa11.5□□□□□ -0.57
DDB1-211ENST00000538280 MIS18AQ9NYP9 233 aa11.5□□□□□ -0.57
DDB1-211ENST00000538280 PAPPAQ13219 1627 aa11.49□□□□□ -0.57
DDB1-211ENST00000538280 NHSQ6T4R5 1651 aa11.49□□□□□ -0.57
DDB1-211ENST00000538280 KCNQ2O43526 872 aa11.49□□□□□ -0.57
DDB1-211ENST00000538280 DDIT3P35638 169 aa11.49□□□□□ -0.57
DDB1-211ENST00000538280 GSE1Q14687 1217 aa11.49□□□□□ -0.57
DDB1-211ENST00000538280 TAF7Q15545 349 aaPredicted RBP11.49□□□□□ -0.57
DDB1-211ENST00000538280 CCDC30Q5VVM6 783 aa11.49□□□□□ -0.57
DDB1-211ENST00000538280 KIF2CQ99661 725 aa11.49□□□□□ -0.57
DDB1-211ENST00000538280 HOXB7P09629 217 aa11.48□□□□□ -0.57
DDB1-211ENST00000538280 STK31Q9BXU1 1019 aa11.48□□□□□ -0.57
DDB1-211ENST00000538280 SPON1Q9HCB6 807 aa11.48□□□□□ -0.57
DDB1-211ENST00000538280 SALL3Q9BXA9 1300 aa11.47□□□□□ -0.57
DDB1-211ENST00000538280 HMMRO75330 724 aa11.47□□□□□ -0.57
DDB1-211ENST00000538280 FLIIQ13045 1269 aa11.47□□□□□ -0.57
DDB1-211ENST00000538280 NBPF14Q5TI25 921 aa11.47□□□□□ -0.57
DDB1-211ENST00000538280 NBPF6Q5VWK0 638 aa11.47□□□□□ -0.57
DDB1-211ENST00000538280 PROM2Q8N271 834 aa11.47□□□□□ -0.57
DDB1-211ENST00000538280 NBPF4Q96M43 638 aa11.47□□□□□ -0.57
DDB1-211ENST00000538280 BCL11AQ9H165 835 aa11.47□□□□□ -0.57
DDB1-211ENST00000538280 OSBPL3Q9H4L5 887 aa11.47□□□□□ -0.57
DDB1-211ENST00000538280 CHMP5Q9NZZ3 219 aa11.47□□□□□ -0.57
DDB1-211ENST00000538280 PPP1R1BQ9UD71 204 aaPredicted RBP11.47□□□□□ -0.57
DDB1-211ENST00000538280 AXIN2Q9Y2T1 843 aa11.47□□□□□ -0.57
DDB1-211ENST00000538280 THRAP3Q9Y2W1 955 aaKnown RBP11.47□□□□□ -0.57
DDB1-211ENST00000538280 BTAF1O14981 1849 aa11.46□□□□□ -0.57
DDB1-211ENST00000538280 ARHGEF25Q86VW2 580 aa11.46□□□□□ -0.57
DDB1-211ENST00000538280 HSCBQ8IWL3 235 aa11.46□□□□□ -0.57
DDB1-211ENST00000538280 MARCH10Q8NA82 808 aaPredicted RBP11.46□□□□□ -0.57
DDB1-211ENST00000538280 SLKQ9H2G2 1235 aaPredicted RBP11.46□□□□□ -0.57
DDB1-211ENST00000538280 CHD4Q14839 1912 aa11.45□□□□□ -0.58
DDB1-211ENST00000538280 PLEKHG2Q9H7P9 1386 aa11.45□□□□□ -0.58
DDB1-211ENST00000538280 F6X3S4 739 aa11.45□□□□□ -0.58
DDB1-211ENST00000538280 ZBTB7AO95365 584 aa11.45□□□□□ -0.58
DDB1-211ENST00000538280 GNAI2P04899 355 aa11.45□□□□□ -0.58
DDB1-211ENST00000538280 GNAI3P08754 354 aa11.45□□□□□ -0.58
DDB1-211ENST00000538280 HEG1Q9ULI3 1381 aa11.44□□□□□ -0.58
DDB1-211ENST00000538280 PTGER2P43116 358 aa11.44□□□□□ -0.58
DDB1-211ENST00000538280 EIF4A1P60842 406 aaKnown RBP11.44□□□□□ -0.58
DDB1-211ENST00000538280 AKAP4Q5JQC9 854 aa11.44□□□□□ -0.58
DDB1-211ENST00000538280 C16orf71Q8IYS4 520 aaPredicted RBP11.44□□□□□ -0.58
DDB1-211ENST00000538280 USHBP1Q8N6Y0 703 aa11.44□□□□□ -0.58
DDB1-211ENST00000538280 OTUD7AQ8TE49 926 aaPredicted RBP11.44□□□□□ -0.58
DDB1-211ENST00000538280 LTV1Q96GA3 475 aaPredicted RBP11.44□□□□□ -0.58
DDB1-211ENST00000538280 CIZ1Q9ULV3 898 aaPredicted RBP11.44□□□□□ -0.58
DDB1-211ENST00000538280 IBTKQ9P2D0 1353 aaPredicted RBP11.43□□□□□ -0.58
DDB1-211ENST00000538280 WDR17Q8IZU2 1322 aa11.43□□□□□ -0.58
DDB1-211ENST00000538280 PLSCR1O15162 318 aa11.43□□□□□ -0.58
DDB1-211ENST00000538280 ATP8B2P98198 1209 aa11.43□□□□□ -0.58
DDB1-211ENST00000538280 DDB1Q16531 1140 aa11.43□□□□□ -0.58
DDB1-211ENST00000538280 TOM1L2Q6ZVM7 507 aa11.43□□□□□ -0.58
DDB1-211ENST00000538280 BCL9O00512 1426 aa11.43□□□□□ -0.58
DDB1-211ENST00000538280 TNS2Q63HR2 1409 aa11.43□□□□□ -0.58
DDB1-211ENST00000538280 SCN11AQ9UI33 1791 aa11.42□□□□□ -0.58
DDB1-211ENST00000538280 SMARCA5O60264 1052 aaPredicted RBP11.42□□□□□ -0.58
DDB1-211ENST00000538280 SDSP20132 328 aa11.42□□□□□ -0.58
DDB1-211ENST00000538280 FKBP5Q13451 457 aaPredicted RBP11.42□□□□□ -0.58
DDB1-211ENST00000538280 AMOTQ4VCS5 1084 aa11.42□□□□□ -0.58
DDB1-211ENST00000538280 PLEKHO1Q53GL0 409 aaPredicted RBP11.42□□□□□ -0.58
DDB1-211ENST00000538280 HDGFL1Q5TGJ6 251 aa11.42□□□□□ -0.58
DDB1-211ENST00000538280 SLC4A10Q6U841 1118 aa11.42□□□□□ -0.58
DDB1-211ENST00000538280 CHMP4AQ9BY43 222 aa11.42□□□□□ -0.58
DDB1-211ENST00000538280 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
DDB1-211ENST00000538280 COL24A1Q17RW2 1714 aa11.41□□□□□ -0.58
DDB1-211ENST00000538280 MCM4P33991 863 aa11.41□□□□□ -0.58
DDB1-211ENST00000538280 USP26Q9BXU7 913 aa11.41□□□□□ -0.58
DDB1-211ENST00000538280 BCL11BQ9C0K0 894 aaPredicted RBP11.41□□□□□ -0.58
DDB1-211ENST00000538280 LGR6Q9HBX8 967 aa11.41□□□□□ -0.58
DDB1-211ENST00000538280 PKD1L3Q7Z443 1732 aa11.4□□□□□ -0.58
DDB1-211ENST00000538280 SHANK3Q9BYB0 1731 aa11.4□□□□□ -0.58
DDB1-211ENST00000538280 AOX1Q06278 1338 aa11.4□□□□□ -0.58
DDB1-211ENST00000538280 K7ELQ4 463 aaPredicted RBP11.4□□□□□ -0.58
DDB1-211ENST00000538280 RNMTO43148 476 aaKnown RBP11.4□□□□□ -0.58
DDB1-211ENST00000538280 PDE1AP54750 535 aa11.4□□□□□ -0.58
DDB1-211ENST00000538280 RABEP1Q15276 862 aa11.4□□□□□ -0.58
DDB1-211ENST00000538280 ZNF530Q6P9A1 599 aaPredicted RBP11.4□□□□□ -0.58
DDB1-211ENST00000538280 SSH3Q8TE77 659 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms