RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 TSPYL4Q9UJ04 414 aa10.46□□□□□ -0.73
CIT-209ENST00000538073 HEG1Q9ULI3 1381 aa10.46□□□□□ -0.74
CIT-209ENST00000538073 PALLDQ8WX93 1383 aa10.45□□□□□ -0.74
CIT-209ENST00000538073 FANCIQ9NVI1 1328 aa10.45□□□□□ -0.74
CIT-209ENST00000538073 PLSCR1O15162 318 aa10.45□□□□□ -0.74
CIT-209ENST00000538073 KCNQ3O43525 872 aa10.45□□□□□ -0.74
CIT-209ENST00000538073 EIF4A1P60842 406 aaKnown RBP10.45□□□□□ -0.74
CIT-209ENST00000538073 CCDC125Q86Z20 511 aa10.45□□□□□ -0.74
CIT-209ENST00000538073 CDCA7LQ96GN5 454 aa10.45□□□□□ -0.74
CIT-209ENST00000538073 YTHDC1Q96MU7 727 aaKnown RBP10.45□□□□□ -0.74
CIT-209ENST00000538073 MYH16Q9H6N6 1097 aa10.45□□□□□ -0.74
CIT-209ENST00000538073 LAS1LQ9Y4W2 734 aaKnown RBP10.45□□□□□ -0.74
CIT-209ENST00000538073 TJP1Q07157 1748 aa10.44□□□□□ -0.74
CIT-209ENST00000538073 DUSP27Q5VZP5 1158 aa10.44□□□□□ -0.74
CIT-209ENST00000538073 TTC5Q8N0Z6 440 aa10.44□□□□□ -0.74
CIT-209ENST00000538073 TSR2Q969E8 191 aaKnown RBP10.44□□□□□ -0.74
CIT-209ENST00000538073 ZNF496Q96IT1 587 aaPredicted RBP10.44□□□□□ -0.74
CIT-209ENST00000538073 SLC4A9Q96Q91 983 aa10.44□□□□□ -0.74
CIT-209ENST00000538073 APBA3O96018 575 aa10.43□□□□□ -0.74
CIT-209ENST00000538073 VSIG10Q8N0Z9 540 aa10.43□□□□□ -0.74
CIT-209ENST00000538073 FMNL2Q96PY5 1086 aa10.43□□□□□ -0.74
CIT-209ENST00000538073 COL5A3P25940 1745 aaPredicted RBP10.43□□□□□ -0.74
CIT-209ENST00000538073 C5P01031 1676 aa10.43□□□□□ -0.74
CIT-209ENST00000538073 SRCAPQ6ZRS2 3230 aa10.43□□□□□ -0.74
CIT-209ENST00000538073 TAF1LQ8IZX4 1826 aa10.42□□□□□ -0.74
CIT-209ENST00000538073 LAMB4A4D0S4 1761 aa10.42□□□□□ -0.74
CIT-209ENST00000538073 RREB1Q92766 1687 aa10.42□□□□□ -0.74
CIT-209ENST00000538073 PTCD1O75127 700 aaKnown RBP10.42□□□□□ -0.74
CIT-209ENST00000538073 SOS1Q07889 1333 aaPredicted RBP10.41□□□□□ -0.74
CIT-209ENST00000538073 LOC102724428A0A0B4J2F2 783 aa10.41□□□□□ -0.74
CIT-209ENST00000538073 GIGYF1O75420 1035 aaPredicted RBP10.41□□□□□ -0.74
CIT-209ENST00000538073 HOXB7P09629 217 aa10.41□□□□□ -0.74
CIT-209ENST00000538073 SIK1P57059 783 aa10.41□□□□□ -0.74
CIT-209ENST00000538073 KRT24Q2M2I5 525 aa10.41□□□□□ -0.74
CIT-209ENST00000538073 PROM2Q8N271 834 aa10.41□□□□□ -0.74
CIT-209ENST00000538073 CAMKK2Q96RR4 588 aa10.41□□□□□ -0.74
CIT-209ENST00000538073 SNRPA1P09661 255 aaKnown RBP10.4□□□□□ -0.74
CIT-209ENST00000538073 ATP6V1AP38606 617 aa10.4□□□□□ -0.74
CIT-209ENST00000538073 BAG6P46379 1132 aa10.4□□□□□ -0.74
CIT-209ENST00000538073 EXOSC9Q06265 439 aaKnown RBP10.4□□□□□ -0.74
CIT-209ENST00000538073 SF3B2Q13435 895 aaKnown RBP10.4□□□□□ -0.74
CIT-209ENST00000538073 ITPK1Q13572 414 aa10.4□□□□□ -0.74
CIT-209ENST00000538073 TXNRD1Q16881 649 aa10.4□□□□□ -0.74
CIT-209ENST00000538073 SLC27A3Q5K4L6 730 aa10.4□□□□□ -0.74
CIT-209ENST00000538073 C8orf58Q8NAV2 365 aa10.4□□□□□ -0.74
CIT-209ENST00000538073 TEX13AQ9BXU3 409 aaPredicted RBP10.4□□□□□ -0.74
CIT-209ENST00000538073 LRRC4BQ9NT99 713 aa10.4□□□□□ -0.74
CIT-209ENST00000538073 PRAMEF22A3QJZ6 481 aa10.39□□□□□ -0.75
CIT-209ENST00000538073 EN1Q05925 392 aaPredicted RBP10.39□□□□□ -0.75
CIT-209ENST00000538073 EZH2Q15910 746 aaKnown RBP10.39□□□□□ -0.75
CIT-209ENST00000538073 TSPYL6Q8N831 410 aa10.39□□□□□ -0.75
CIT-209ENST00000538073 CCNL1Q9UK58 526 aaPredicted RBP10.39□□□□□ -0.75
CIT-209ENST00000538073 NUP188Q5SRE5 1749 aa10.38□□□□□ -0.75
CIT-209ENST00000538073 CT47B1P0C2W7 299 aaPredicted RBP10.38□□□□□ -0.75
CIT-209ENST00000538073 TWISTNBQ3B726 338 aaPredicted RBP10.38□□□□□ -0.75
CIT-209ENST00000538073 DEFB132Q7Z7B7 95 aa10.38□□□□□ -0.75
CIT-209ENST00000538073 DNAJC10Q8IXB1 793 aa10.38□□□□□ -0.75
CIT-209ENST00000538073 ZNF579Q8NAF0 562 aaKnown RBP10.38□□□□□ -0.75
CIT-209ENST00000538073 USP16Q9Y5T5 823 aa10.38□□□□□ -0.75
CIT-209ENST00000538073 C4BP0C0L5 1744 aa10.38□□□□□ -0.75
CIT-209ENST00000538073 MYH14Q7Z406 1995 aaKnown RBP10.37□□□□□ -0.75
CIT-209ENST00000538073 ELL2O00472 640 aaPredicted RBP10.37□□□□□ -0.75
CIT-209ENST00000538073 VAMP4O75379 141 aa10.37□□□□□ -0.75
CIT-209ENST00000538073 CYP19A1P11511 503 aaPredicted RBP10.37□□□□□ -0.75
CIT-209ENST00000538073 HMGB2P26583 209 aaKnown RBP10.37□□□□□ -0.75
CIT-209ENST00000538073 KCNQ4P56696 695 aa10.37□□□□□ -0.75
CIT-209ENST00000538073 LINC00116Q8NCU8 138 aa10.37□□□□□ -0.75
CIT-209ENST00000538073 PLSCR2Q9NRY7 297 aa10.37□□□□□ -0.75
CIT-209ENST00000538073 CNTNAP4Q9C0A0 1308 aa10.36□□□□□ -0.75
CIT-209ENST00000538073 STARD3NLO95772 234 aa10.36□□□□□ -0.75
CIT-209ENST00000538073 RC3H1Q5TC82 1133 aaKnown RBP10.36□□□□□ -0.75
CIT-209ENST00000538073 ZNF428Q96B54 188 aa10.36□□□□□ -0.75
CIT-209ENST00000538073 CHMP4AQ9BY43 222 aa10.36□□□□□ -0.75
CIT-209ENST00000538073 ERBB4Q15303 1308 aa10.35□□□□□ -0.75
CIT-209ENST00000538073 CRKLP46109 303 aaKnown RBP10.35□□□□□ -0.75
CIT-209ENST00000538073 HDGFL1Q5TGJ6 251 aa10.35□□□□□ -0.75
CIT-209ENST00000538073 INTS5Q6P9B9 1019 aaKnown RBP10.35□□□□□ -0.75
CIT-209ENST00000538073 UBR3Q6ZT12 1888 aa10.35□□□□□ -0.75
CIT-209ENST00000538073 CACNA1FO60840 1977 aa10.34□□□□□ -0.75
CIT-209ENST00000538073 QSER1Q2KHR3 1735 aa10.34□□□□□ -0.75
CIT-209ENST00000538073 EIF2S2P20042 333 aaKnown RBP10.34□□□□□ -0.75
CIT-209ENST00000538073 PDIA6Q15084 440 aa10.34□□□□□ -0.75
CIT-209ENST00000538073 CCDC30Q5VVM6 783 aa10.34□□□□□ -0.75
CIT-209ENST00000538073 LRP10Q7Z4F1 713 aa10.34□□□□□ -0.75
CIT-209ENST00000538073 CCDC87Q9NVE4 849 aa10.34□□□□□ -0.75
CIT-209ENST00000538073 ZBTB1Q9Y2K1 713 aa10.34□□□□□ -0.75
CIT-209ENST00000538073 TUBGCP6Q96RT7 1819 aa10.33□□□□□ -0.76
CIT-209ENST00000538073 NBPF26B4DH59 902 aa10.33□□□□□ -0.76
CIT-209ENST00000538073 A1BGP04217 495 aa10.33□□□□□ -0.76
CIT-209ENST00000538073 ALDH1L2Q3SY69 923 aa10.33□□□□□ -0.76
CIT-209ENST00000538073 NBPF14Q5TI25 921 aa10.33□□□□□ -0.76
CIT-209ENST00000538073 NBPF10Q6P3W6 841 aaKnown RBP10.33□□□□□ -0.76
CIT-209ENST00000538073 NBPF15Q8N660 670 aa10.33□□□□□ -0.76
CIT-209ENST00000538073 DDX21Q9NR30 783 aaKnown RBP eCLIP10.33□□□□□ -0.76
CIT-209ENST00000538073 CREBZFQ9NS37 354 aa10.33□□□□□ -0.76
CIT-209ENST00000538073 CHPF2Q9P2E5 772 aa10.33□□□□□ -0.76
CIT-209ENST00000538073 DBF4Q9UBU7 674 aaPredicted RBP10.33□□□□□ -0.76
CIT-209ENST00000538073 RPS6KA4O75676 772 aa10.32□□□□□ -0.76
CIT-209ENST00000538073 IL6STP40189 918 aaPredicted RBP10.32□□□□□ -0.76
CIT-209ENST00000538073 RARSP54136 660 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms