RNA–Protein interactions for RNA: ENST00000538051.5

LMO3-219, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-219ENST00000538051 TSPYL6Q8N831 410 aa15.9■□□□□ 0.14
LMO3-219ENST00000538051 SPON1Q9HCB6 807 aa15.9■□□□□ 0.14
LMO3-219ENST00000538051 SMC4Q9NTJ3 1288 aa15.9■□□□□ 0.14
LMO3-219ENST00000538051 DBF4Q9UBU7 674 aaPredicted RBP15.9■□□□□ 0.14
LMO3-219ENST00000538051 NUP188Q5SRE5 1749 aa15.9■□□□□ 0.14
LMO3-219ENST00000538051 RREB1Q92766 1687 aa15.89■□□□□ 0.13
LMO3-219ENST00000538051 KCNQ3O43525 872 aa15.89■□□□□ 0.13
LMO3-219ENST00000538051 YY1P25490 414 aa15.89■□□□□ 0.13
LMO3-219ENST00000538051 SSH1Q8WYL5 1049 aa15.89■□□□□ 0.13
LMO3-219ENST00000538051 ACSBG1Q96GR2 724 aa15.89■□□□□ 0.13
LMO3-219ENST00000538051 ASAP1Q9ULH1 1129 aa15.89■□□□□ 0.13
LMO3-219ENST00000538051 RRP1P56182 461 aaKnown RBP15.88■□□□□ 0.13
LMO3-219ENST00000538051 HYPKQ9NX55 129 aa15.88■□□□□ 0.13
LMO3-219ENST00000538051 LOC102724428A0A0B4J2F2 783 aa15.87■□□□□ 0.13
LMO3-219ENST00000538051 KCNQ2O43526 872 aa15.87■□□□□ 0.13
LMO3-219ENST00000538051 SIK1P57059 783 aa15.87■□□□□ 0.13
LMO3-219ENST00000538051 PDE3AQ14432 1141 aa15.87■□□□□ 0.13
LMO3-219ENST00000538051 DDX21Q9NR30 783 aaKnown RBP eCLIP15.87■□□□□ 0.13
LMO3-219ENST00000538051 TJP1Q07157 1748 aa15.87■□□□□ 0.13
LMO3-219ENST00000538051 COL5A3P25940 1745 aaPredicted RBP15.86■□□□□ 0.13
LMO3-219ENST00000538051 ELL2O00472 640 aaPredicted RBP15.86■□□□□ 0.13
LMO3-219ENST00000538051 PLSCR1O15162 318 aa15.86■□□□□ 0.13
LMO3-219ENST00000538051 NEFLP07196 543 aa15.86■□□□□ 0.13
LMO3-219ENST00000538051 SLC27A3Q5K4L6 730 aa15.86■□□□□ 0.13
LMO3-219ENST00000538051 ERICH6BQ5W0A0 696 aa15.86■□□□□ 0.13
LMO3-219ENST00000538051 ZKSCAN2Q63HK3 967 aa15.86■□□□□ 0.13
LMO3-219ENST00000538051 MRPL50Q8N5N7 158 aaKnown RBP15.86■□□□□ 0.13
LMO3-219ENST00000538051 API5Q9BZZ5 524 aaKnown RBP15.86■□□□□ 0.13
LMO3-219ENST00000538051 PTCD1O75127 700 aaKnown RBP15.85■□□□□ 0.13
LMO3-219ENST00000538051 AAMPQ13685 434 aa15.85■□□□□ 0.13
LMO3-219ENST00000538051 KRT24Q2M2I5 525 aa15.85■□□□□ 0.13
LMO3-219ENST00000538051 SUPT16HQ9Y5B9 1047 aaKnown RBP15.85■□□□□ 0.13
LMO3-219ENST00000538051 IBTKQ9P2D0 1353 aaPredicted RBP15.85■□□□□ 0.13
LMO3-219ENST00000538051 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
LMO3-219ENST00000538051 CANXP27824 592 aaKnown RBP15.84■□□□□ 0.13
LMO3-219ENST00000538051 PXDNLA1KZ92 1463 aa15.84■□□□□ 0.13
LMO3-219ENST00000538051 RGL2O15211 777 aa15.83■□□□□ 0.12
LMO3-219ENST00000538051 DDX58O95786 925 aaKnown RBP15.83■□□□□ 0.12
LMO3-219ENST00000538051 RC3H1Q5TC82 1133 aaKnown RBP15.83■□□□□ 0.12
LMO3-219ENST00000538051 ATF7IPQ6VMQ6 1270 aa15.83■□□□□ 0.12
LMO3-219ENST00000538051 RBM42Q9BTD8 480 aaKnown RBP15.83■□□□□ 0.12
LMO3-219ENST00000538051 CHMP4BQ9H444 224 aaKnown RBP15.83■□□□□ 0.12
LMO3-219ENST00000538051 N4BP2Q86UW6 1770 aaPredicted RBP15.82■□□□□ 0.12
LMO3-219ENST00000538051 TAF1LQ8IZX4 1826 aa15.82■□□□□ 0.12
LMO3-219ENST00000538051 BCAR3O75815 825 aa15.82■□□□□ 0.12
LMO3-219ENST00000538051 EIF2S2P20042 333 aaKnown RBP15.82■□□□□ 0.12
LMO3-219ENST00000538051 ATP6V1AP38606 617 aa15.82■□□□□ 0.12
LMO3-219ENST00000538051 CNTNAP4Q9C0A0 1308 aa15.82■□□□□ 0.12
LMO3-219ENST00000538051 CYP19A1P11511 503 aaPredicted RBP15.81■□□□□ 0.12
LMO3-219ENST00000538051 IL6STP40189 918 aaPredicted RBP15.81■□□□□ 0.12
LMO3-219ENST00000538051 FLIIQ13045 1269 aa15.81■□□□□ 0.12
LMO3-219ENST00000538051 PTF1AQ7RTS3 328 aa15.81■□□□□ 0.12
LMO3-219ENST00000538051 CHPF2Q9P2E5 772 aa15.81■□□□□ 0.12
LMO3-219ENST00000538051 USP16Q9Y5T5 823 aa15.81■□□□□ 0.12
LMO3-219ENST00000538051 DNAJC10Q8IXB1 793 aa15.8■□□□□ 0.12
LMO3-219ENST00000538051 ZBTB7AO95365 584 aa15.79■□□□□ 0.12
LMO3-219ENST00000538051 PDIA6Q15084 440 aa15.79■□□□□ 0.12
LMO3-219ENST00000538051 NPM2Q86SE8 214 aaKnown RBP15.79■□□□□ 0.12
LMO3-219ENST00000538051 FTSJ3Q8IY81 847 aaKnown RBP15.79■□□□□ 0.12
LMO3-219ENST00000538051 SLC4A9Q96Q91 983 aa15.79■□□□□ 0.12
LMO3-219ENST00000538051 ANO8Q9HCE9 1232 aaPredicted RBP15.79■□□□□ 0.12
LMO3-219ENST00000538051 CCNL1Q9UK58 526 aaPredicted RBP15.79■□□□□ 0.12
LMO3-219ENST00000538051 NOB1Q9ULX3 412 aaKnown RBP15.79■□□□□ 0.12
LMO3-219ENST00000538051 ABCC4O15439 1325 aa15.78■□□□□ 0.12
LMO3-219ENST00000538051 TRIM27P14373 513 aa15.78■□□□□ 0.12
LMO3-219ENST00000538051 DZIP1LQ8IYY4 767 aaKnown RBP15.78■□□□□ 0.12
LMO3-219ENST00000538051 FRAT1Q92837 279 aaPredicted RBP15.78■□□□□ 0.12
LMO3-219ENST00000538051 BCL2L13Q9BXK5 485 aa15.78■□□□□ 0.12
LMO3-219ENST00000538051 PDGFDQ9GZP0 370 aaPredicted RBP15.78■□□□□ 0.12
LMO3-219ENST00000538051 CCDC87Q9NVE4 849 aa15.78■□□□□ 0.12
LMO3-219ENST00000538051 ATF5Q9Y2D1 282 aaPredicted RBP15.78■□□□□ 0.12
LMO3-219ENST00000538051 ATP10DQ9P241 1426 aa15.77■□□□□ 0.12
LMO3-219ENST00000538051 A0A087WZG4 1122 aa15.77■□□□□ 0.12
LMO3-219ENST00000538051 FKBP5Q13451 457 aaPredicted RBP15.77■□□□□ 0.12
LMO3-219ENST00000538051 LRP10Q7Z4F1 713 aa15.77■□□□□ 0.12
LMO3-219ENST00000538051 STK32BQ9NY57 414 aa15.77■□□□□ 0.12
LMO3-219ENST00000538051 C4BP0C0L5 1744 aa15.77■□□□□ 0.11
LMO3-219ENST00000538051 PRAMEF22A3QJZ6 481 aa15.76■□□□□ 0.11
LMO3-219ENST00000538051 ADRA2BP18089 450 aa15.76■□□□□ 0.11
LMO3-219ENST00000538051 CCT4P50991 539 aaKnown RBP15.76■□□□□ 0.11
LMO3-219ENST00000538051 PROM2Q8N271 834 aa15.76■□□□□ 0.11
LMO3-219ENST00000538051 MYH14Q7Z406 1995 aaKnown RBP15.75■□□□□ 0.11
LMO3-219ENST00000538051 CRKLP46109 303 aaKnown RBP15.75■□□□□ 0.11
LMO3-219ENST00000538051 ITPK1Q13572 414 aa15.75■□□□□ 0.11
LMO3-219ENST00000538051 TXNRD1Q16881 649 aa15.75■□□□□ 0.11
LMO3-219ENST00000538051 INTS3Q68E01 1043 aaKnown RBP15.75■□□□□ 0.11
LMO3-219ENST00000538051 KSR2Q6VAB6 950 aa15.75■□□□□ 0.11
LMO3-219ENST00000538051 DDX19BQ9UMR2 479 aa15.75■□□□□ 0.11
LMO3-219ENST00000538051 NBPF26B4DH59 902 aa15.74■□□□□ 0.11
LMO3-219ENST00000538051 ERVV-1B6SEH8 477 aa15.74■□□□□ 0.11
LMO3-219ENST00000538051 EIF5P55010 431 aaKnown RBP15.74■□□□□ 0.11
LMO3-219ENST00000538051 NBPF10Q6P3W6 841 aaKnown RBP15.74■□□□□ 0.11
LMO3-219ENST00000538051 NBPF15Q8N660 670 aa15.74■□□□□ 0.11
LMO3-219ENST00000538051 PLBD2Q8NHP8 589 aa15.74■□□□□ 0.11
LMO3-219ENST00000538051 NECTIN2Q92692 538 aa15.74■□□□□ 0.11
LMO3-219ENST00000538051 A1BGP04217 495 aa15.73■□□□□ 0.11
LMO3-219ENST00000538051 NEXNQ0ZGT2 675 aa15.73■□□□□ 0.11
LMO3-219ENST00000538051 HSP90AB3PQ58FF7 597 aa15.73■□□□□ 0.11
LMO3-219ENST00000538051 INTS5Q6P9B9 1019 aaKnown RBP15.73■□□□□ 0.11
LMO3-219ENST00000538051 KIF6Q6ZMV9 814 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms