RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 FOXD4L3Q6VB84 417 aaPredicted RBP10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 FAM212AQ96EL1 285 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 FAM107BQ9H098 131 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 CLIP2Q9UDT6 1046 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 CUL7Q14999 1698 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 ABCC10Q5T3U5 1492 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 SEMA3FQ13275 785 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 PLA2G4DQ86XP0 818 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 JMYQ8N9B5 988 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 NRBP1Q9UHY1 535 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 CDC25BP30305 580 aa10.04□□□□□ -0.8
SRGAP1-202ENST00000537556 PPP2R5AQ15172 486 aa10.04□□□□□ -0.8
SRGAP1-202ENST00000537556 LRRC8AQ8IWT6 810 aa10.04□□□□□ -0.8
SRGAP1-202ENST00000537556 TBC1D22AQ8WUA7 517 aa10.04□□□□□ -0.8
SRGAP1-202ENST00000537556 CHMP7Q8WUX9 453 aaPredicted RBP10.04□□□□□ -0.8
SRGAP1-202ENST00000537556 ZCCHC17Q9NP64 241 aaKnown RBP10.04□□□□□ -0.8
SRGAP1-202ENST00000537556 KCND1Q9NSA2 647 aa10.04□□□□□ -0.8
SRGAP1-202ENST00000537556 STK26Q9P289 416 aa10.04□□□□□ -0.8
SRGAP1-202ENST00000537556 RRP7AQ9Y3A4 280 aaKnown RBP10.04□□□□□ -0.8
SRGAP1-202ENST00000537556 MNAT1P51948 309 aa10.04□□□□□ -0.8
SRGAP1-202ENST00000537556 NBPF11Q86T75 865 aa10.04□□□□□ -0.8
SRGAP1-202ENST00000537556 ZSCAN16Q9H4T2 348 aaPredicted RBP10.04□□□□□ -0.8
SRGAP1-202ENST00000537556 PTPRGP23470 1445 aa10.04□□□□□ -0.8
SRGAP1-202ENST00000537556 CLTCL1P53675 1640 aa10.03□□□□□ -0.8
SRGAP1-202ENST00000537556 SPAG9O60271 1321 aaKnown RBP10.03□□□□□ -0.8
SRGAP1-202ENST00000537556 SMC2O95347 1197 aa10.03□□□□□ -0.8
SRGAP1-202ENST00000537556 ZKSCAN8Q15776 578 aaPredicted RBP10.03□□□□□ -0.8
SRGAP1-202ENST00000537556 NBPF10Q6P3W6 841 aaKnown RBP10.03□□□□□ -0.8
SRGAP1-202ENST00000537556 NOB1Q9ULX3 412 aaKnown RBP10.03□□□□□ -0.8
SRGAP1-202ENST00000537556 ADGRL2O95490 1459 aa10.03□□□□□ -0.8
SRGAP1-202ENST00000537556 ADGBQ8N7X0 1667 aa10.03□□□□□ -0.8
SRGAP1-202ENST00000537556 A0A087WUV0 522 aaPredicted RBP10.03□□□□□ -0.8
SRGAP1-202ENST00000537556 SKILP12757 684 aa10.03□□□□□ -0.8
SRGAP1-202ENST00000537556 GSPT1P15170 499 aaKnown RBP10.03□□□□□ -0.8
SRGAP1-202ENST00000537556 SRRTQ9BXP5 876 aaKnown RBP10.03□□□□□ -0.8
SRGAP1-202ENST00000537556 H0YHG0 523 aa10.02□□□□□ -0.8
SRGAP1-202ENST00000537556 SARNPP82979 210 aaKnown RBP10.02□□□□□ -0.8
SRGAP1-202ENST00000537556 SSH1Q8WYL5 1049 aa10.02□□□□□ -0.8
SRGAP1-202ENST00000537556 ORC3Q9UBD5 711 aaPredicted RBP10.02□□□□□ -0.8
SRGAP1-202ENST00000537556 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.02□□□□□ -0.8
SRGAP1-202ENST00000537556 EIF2AK4Q9P2K8 1649 aaKnown RBP10.02□□□□□ -0.8
SRGAP1-202ENST00000537556 SETQ01105 290 aaPredicted RBP10.02□□□□□ -0.81
SRGAP1-202ENST00000537556 BIRC2Q13490 618 aa10.02□□□□□ -0.81
SRGAP1-202ENST00000537556 MAP3K11Q16584 847 aa10.02□□□□□ -0.81
SRGAP1-202ENST00000537556 TTC22Q5TAA0 569 aa10.02□□□□□ -0.81
SRGAP1-202ENST00000537556 TADA2BQ86TJ2 420 aa10.02□□□□□ -0.81
SRGAP1-202ENST00000537556 CCAR2Q8N163 923 aaKnown RBP10.02□□□□□ -0.81
SRGAP1-202ENST00000537556 CNPY2Q9Y2B0 182 aa10.02□□□□□ -0.81
SRGAP1-202ENST00000537556 SNW1Q13573 536 aaKnown RBP10.02□□□□□ -0.81
SRGAP1-202ENST00000537556 C11orf91Q3C1V1 193 aa10.02□□□□□ -0.81
SRGAP1-202ENST00000537556 CCDC93Q567U6 631 aa10.02□□□□□ -0.81
SRGAP1-202ENST00000537556 CCDC158Q5M9N0 1113 aa10.02□□□□□ -0.81
SRGAP1-202ENST00000537556 SRCIN1Q9C0H9 1055 aa10.02□□□□□ -0.81
SRGAP1-202ENST00000537556 RPAP1Q9BWH6 1393 aaPredicted RBP10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 ZNF644Q9H582 1327 aaPredicted RBP10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 KLHL33A6NCF5 533 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 TTC36A6NLP5 189 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 USP27XA6NNY8 438 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 ERCC3P19447 782 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 LUZP1Q86V48 1076 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 ERC1Q8IUD2 1116 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 GIMAP7Q8NHV1 300 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 ARFGAP3Q9NP61 516 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 TERF2IPQ9NYB0 399 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 AATKQ6ZMQ8 1374 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 ERC2O15083 957 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 TBC1D8O95759 1140 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 CAVIN2O95810 425 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 TYRO3Q06418 890 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 STAG1Q8WVM7 1258 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 IQSEC2Q5JU85 1478 aa10.01□□□□□ -0.81
SRGAP1-202ENST00000537556 PPIP5K1Q6PFW1 1433 aa10□□□□□ -0.81
SRGAP1-202ENST00000537556 EIF5P55010 431 aaKnown RBP10□□□□□ -0.81
SRGAP1-202ENST00000537556 PLEKHM2Q8IWE5 1019 aa10□□□□□ -0.81
SRGAP1-202ENST00000537556 TDRD7Q8NHU6 1098 aaKnown RBP10□□□□□ -0.81
SRGAP1-202ENST00000537556 PDRG1Q9NUG6 133 aa10□□□□□ -0.81
SRGAP1-202ENST00000537556 TRMT1Q9NXH9 659 aaKnown RBP10□□□□□ -0.81
SRGAP1-202ENST00000537556 ABCC11Q96J66 1382 aa10□□□□□ -0.81
SRGAP1-202ENST00000537556 EFCAB8A8MWE9 144 aa10□□□□□ -0.81
SRGAP1-202ENST00000537556 MAP9Q49MG5 647 aa10□□□□□ -0.81
SRGAP1-202ENST00000537556 NBPF6Q5VWK0 638 aa10□□□□□ -0.81
SRGAP1-202ENST00000537556 NBPF5PQ86XG9 351 aaPredicted RBP10□□□□□ -0.81
SRGAP1-202ENST00000537556 NBPF4Q96M43 638 aa10□□□□□ -0.81
SRGAP1-202ENST00000537556 SGSM2O43147 1006 aa9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 C21orf2O43822 256 aa9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 ZSCAN22P10073 491 aaPredicted RBP9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 TPRNQ4KMQ1 711 aa9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 CC2D1AQ6P1N0 951 aaPredicted RBP9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 MICALL1Q8N3F8 863 aa9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 CBX8Q9HC52 389 aa9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 MRVI1Q9Y6F6 885 aa9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 FIBPO43427 364 aa9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 IRX1P78414 480 aaPredicted RBP9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 EXOSC9Q06265 439 aaKnown RBP9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 ANAPC15P60006 121 aa9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 RGL3Q3MIN7 710 aa9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 CCDC144BQ3MJ40 725 aa9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 GBP6Q6ZN66 633 aa9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 FMNL3Q8IVF7 1028 aa9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 CCDC144CPQ8IYA2 1237 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms