RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 SCN11AQ9UI33 1791 aa7.27□□□□□ -1.25
SNHG1-204ENST00000537068 IGSF1Q8N6C5 1336 aa7.27□□□□□ -1.25
SNHG1-204ENST00000537068 CLSPNQ9HAW4 1339 aa7.27□□□□□ -1.25
SNHG1-204ENST00000537068 ERVV-2B6SEH9 535 aa7.26□□□□□ -1.25
SNHG1-204ENST00000537068 GTPBP6O43824 516 aaPredicted RBP7.26□□□□□ -1.25
SNHG1-204ENST00000537068 POTEIP0CG38 1075 aa7.26□□□□□ -1.25
SNHG1-204ENST00000537068 ATP6V1AP38606 617 aa7.26□□□□□ -1.25
SNHG1-204ENST00000537068 RC3H1Q5TC82 1133 aaKnown RBP7.26□□□□□ -1.25
SNHG1-204ENST00000537068 ZNF579Q8NAF0 562 aaKnown RBP7.26□□□□□ -1.25
SNHG1-204ENST00000537068 TMOD3Q9NYL9 352 aa7.26□□□□□ -1.25
SNHG1-204ENST00000537068 PPM1GO15355 546 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-204ENST00000537068 TGFB2P61812 414 aa7.25□□□□□ -1.25
SNHG1-204ENST00000537068 DCAF5Q96JK2 942 aa7.25□□□□□ -1.25
SNHG1-204ENST00000537068 SBF1O95248 1867 aa7.25□□□□□ -1.25
SNHG1-204ENST00000537068 PXDNLA1KZ92 1463 aa7.24□□□□□ -1.25
SNHG1-204ENST00000537068 TJP1Q07157 1748 aa7.24□□□□□ -1.25
SNHG1-204ENST00000537068 RPS6KA4O75676 772 aa7.24□□□□□ -1.25
SNHG1-204ENST00000537068 PHF14O94880 888 aa7.24□□□□□ -1.25
SNHG1-204ENST00000537068 TRAPPC3LQ5T215 181 aa7.24□□□□□ -1.25
SNHG1-204ENST00000537068 LHX8Q68G74 356 aa7.24□□□□□ -1.25
SNHG1-204ENST00000537068 NLGN1Q8N2Q7 840 aa7.24□□□□□ -1.25
SNHG1-204ENST00000537068 GPBP1L1Q9HC44 474 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-204ENST00000537068 KDM6AO15550 1401 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-204ENST00000537068 CNTNAP4Q9C0A0 1308 aa7.24□□□□□ -1.25
SNHG1-204ENST00000537068 KIF3CO14782 793 aa7.23□□□□□ -1.25
SNHG1-204ENST00000537068 GNPATO15228 680 aa7.23□□□□□ -1.25
SNHG1-204ENST00000537068 HSP90AB1P08238 724 aaKnown RBP7.23□□□□□ -1.25
SNHG1-204ENST00000537068 GYS1P13807 737 aa7.23□□□□□ -1.25
SNHG1-204ENST00000537068 KCNA3P22001 575 aa7.23□□□□□ -1.25
SNHG1-204ENST00000537068 AMOTQ4VCS5 1084 aa7.23□□□□□ -1.25
SNHG1-204ENST00000537068 ARHGEF1Q92888 912 aaKnown RBP7.23□□□□□ -1.25
SNHG1-204ENST00000537068 RTCBQ9Y3I0 505 aaKnown RBP7.23□□□□□ -1.25
SNHG1-204ENST00000537068 C10orf71Q711Q0 1435 aa7.23□□□□□ -1.25
SNHG1-204ENST00000537068 AFDNP55196 1824 aaKnown RBP7.22□□□□□ -1.25
SNHG1-204ENST00000537068 NRXN2Q9P2S2 1712 aa7.22□□□□□ -1.25
SNHG1-204ENST00000537068 MMP10P09238 476 aa7.22□□□□□ -1.25
SNHG1-204ENST00000537068 HSPA6P17066 643 aa7.22□□□□□ -1.25
SNHG1-204ENST00000537068 PLEKHO1Q53GL0 409 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-204ENST00000537068 IFFO2Q5TF58 517 aa7.22□□□□□ -1.25
SNHG1-204ENST00000537068 PANK3Q9H999 370 aa7.22□□□□□ -1.25
SNHG1-204ENST00000537068 PCDHB8Q9UN66 801 aa7.21□□□□□ -1.26
SNHG1-204ENST00000537068 PCDHB13Q9Y5F0 798 aa7.21□□□□□ -1.26
SNHG1-204ENST00000537068 CCDC88AQ3V6T2 1871 aa7.21□□□□□ -1.26
SNHG1-204ENST00000537068 CEP350Q5VT06 3117 aa7.21□□□□□ -1.26
SNHG1-204ENST00000537068 UBR2Q8IWV8 1755 aa7.2□□□□□ -1.26
SNHG1-204ENST00000537068 DLEC1Q9Y238 1755 aa7.2□□□□□ -1.26
SNHG1-204ENST00000537068 A0A0G2JLW4 131 aa7.2□□□□□ -1.26
SNHG1-204ENST00000537068 HSPA5P11021 654 aaKnown RBP7.2□□□□□ -1.26
SNHG1-204ENST00000537068 TM4SF1P30408 202 aa7.2□□□□□ -1.26
SNHG1-204ENST00000537068 IL13P35225 146 aa7.2□□□□□ -1.26
SNHG1-204ENST00000537068 TNNT2P45379 298 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-204ENST00000537068 CABP4P57796 275 aa7.2□□□□□ -1.26
SNHG1-204ENST00000537068 EIF4G2P78344 907 aaKnown RBP eCLIP7.2□□□□□ -1.26
SNHG1-204ENST00000537068 NFATC2IPQ8NCF5 419 aa7.2□□□□□ -1.26
SNHG1-204ENST00000537068 WDR90Q96KV7 1748 aa7.19□□□□□ -1.26
SNHG1-204ENST00000537068 TOMM70O94826 608 aa7.19□□□□□ -1.26
SNHG1-204ENST00000537068 DPEP1P16444 411 aa7.19□□□□□ -1.26
SNHG1-204ENST00000537068 RFC4P35249 363 aa7.19□□□□□ -1.26
SNHG1-204ENST00000537068 CRKLP46109 303 aaKnown RBP7.19□□□□□ -1.26
SNHG1-204ENST00000537068 MTHFSP49914 203 aa7.19□□□□□ -1.26
SNHG1-204ENST00000537068 ZNF530Q6P9A1 599 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-204ENST00000537068 INTS5Q6P9B9 1019 aaKnown RBP7.19□□□□□ -1.26
SNHG1-204ENST00000537068 AEBP1Q8IUX7 1158 aa7.19□□□□□ -1.26
SNHG1-204ENST00000537068 DNAJC5GQ8N7S2 189 aa7.19□□□□□ -1.26
SNHG1-204ENST00000537068 CCDC87Q9NVE4 849 aa7.19□□□□□ -1.26
SNHG1-204ENST00000537068 WWC3Q9ULE0 1092 aa7.19□□□□□ -1.26
SNHG1-204ENST00000537068 USP42Q9H9J4 1324 aaKnown RBP7.19□□□□□ -1.26
SNHG1-204ENST00000537068 MRC1P22897 1456 aa7.18□□□□□ -1.26
SNHG1-204ENST00000537068 SIPA1L3O60292 1781 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-204ENST00000537068 PER1O15534 1290 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-204ENST00000537068 TPRNQ4KMQ1 711 aa7.18□□□□□ -1.26
SNHG1-204ENST00000537068 ZNF467Q7Z7K2 595 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-204ENST00000537068 ZNF526Q8TF50 670 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-204ENST00000537068 BCS1LQ9Y276 419 aa7.18□□□□□ -1.26
SNHG1-204ENST00000537068 PARP3Q9Y6F1 533 aa7.18□□□□□ -1.26
SNHG1-204ENST00000537068 TNRC6CQ9HCJ0 1690 aaKnown RBP7.18□□□□□ -1.26
SNHG1-204ENST00000537068 KCPQ6ZWJ8 1503 aa7.17□□□□□ -1.26
SNHG1-204ENST00000537068 DICER1Q9UPY3 1922 aaKnown RBP7.17□□□□□ -1.26
SNHG1-204ENST00000537068 POLRMTO00411 1230 aaKnown RBP7.17□□□□□ -1.26
SNHG1-204ENST00000537068 PTCD1O75127 700 aaKnown RBP7.17□□□□□ -1.26
SNHG1-204ENST00000537068 DDR1Q08345 913 aa7.17□□□□□ -1.26
SNHG1-204ENST00000537068 AKAP4Q5JQC9 854 aa7.17□□□□□ -1.26
SNHG1-204ENST00000537068 C1orf141Q5JVX7 400 aa7.17□□□□□ -1.26
SNHG1-204ENST00000537068 SULT6B1Q6IMI4 303 aa7.17□□□□□ -1.26
SNHG1-204ENST00000537068 MORC1Q86VD1 984 aa7.17□□□□□ -1.26
SNHG1-204ENST00000537068 SLC52A2Q9HAB3 445 aa7.17□□□□□ -1.26
SNHG1-204ENST00000537068 LGR6Q9HBX8 967 aa7.17□□□□□ -1.26
SNHG1-204ENST00000537068 PIM2Q9P1W9 311 aa7.17□□□□□ -1.26
SNHG1-204ENST00000537068 ANKRD31Q8N7Z5 1873 aa7.16□□□□□ -1.26
SNHG1-204ENST00000537068 RNMTO43148 476 aaKnown RBP7.16□□□□□ -1.26
SNHG1-204ENST00000537068 FCHSD2O94868 740 aa7.16□□□□□ -1.26
SNHG1-204ENST00000537068 CYP19A1P11511 503 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-204ENST00000537068 APLP1P51693 650 aa7.16□□□□□ -1.26
SNHG1-204ENST00000537068 ARHGAP27Q6ZUM4 889 aa7.16□□□□□ -1.26
SNHG1-204ENST00000537068 SRP68Q9UHB9 627 aaKnown RBP7.16□□□□□ -1.26
SNHG1-204ENST00000537068 KNSTRNQ9Y448 316 aa7.16□□□□□ -1.26
SNHG1-204ENST00000537068 FER1L6Q2WGJ9 1857 aa7.15□□□□□ -1.26
SNHG1-204ENST00000537068 PDAP1Q13442 181 aaKnown RBP7.15□□□□□ -1.26
SNHG1-204ENST00000537068 C9orf131Q5VYM1 1079 aa7.15□□□□□ -1.26
SNHG1-204ENST00000537068 DNAJC10Q8IXB1 793 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms