RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 CHMP5Q9NZZ3 219 aa11.49□□□□□ -0.57
UBE3B-207ENST00000537063 PHKG2P15735 406 aa11.49□□□□□ -0.57
UBE3B-207ENST00000537063 EIF2S2P20042 333 aaKnown RBP11.49□□□□□ -0.57
UBE3B-207ENST00000537063 PI4KAP2A4QPH2 592 aa11.49□□□□□ -0.57
UBE3B-207ENST00000537063 ALDH1L1O75891 902 aa11.49□□□□□ -0.57
UBE3B-207ENST00000537063 PI4KAP1Q8N8J0 262 aa11.49□□□□□ -0.57
UBE3B-207ENST00000537063 RAB11FIP3O75154 756 aa11.48□□□□□ -0.57
UBE3B-207ENST00000537063 SLC52A2Q9HAB3 445 aa11.48□□□□□ -0.57
UBE3B-207ENST00000537063 UTYO14607 1347 aa11.48□□□□□ -0.57
UBE3B-207ENST00000537063 MX1P20591 662 aa11.48□□□□□ -0.57
UBE3B-207ENST00000537063 GSE1Q14687 1217 aa11.48□□□□□ -0.57
UBE3B-207ENST00000537063 CD2BP2O95400 341 aaKnown RBP11.48□□□□□ -0.57
UBE3B-207ENST00000537063 PDIA6Q15084 440 aa11.48□□□□□ -0.57
UBE3B-207ENST00000537063 CASC1Q6TDU7 716 aa11.48□□□□□ -0.57
UBE3B-207ENST00000537063 RAPGEF4Q8WZA2 1011 aa11.48□□□□□ -0.57
UBE3B-207ENST00000537063 CIZ1Q9ULV3 898 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-207ENST00000537063 SPG7Q9UQ90 795 aa11.48□□□□□ -0.57
UBE3B-207ENST00000537063 APBB1O00213 710 aa11.47□□□□□ -0.57
UBE3B-207ENST00000537063 PROSER3Q2NL68 480 aa11.47□□□□□ -0.57
UBE3B-207ENST00000537063 HYPKQ9NX55 129 aa11.47□□□□□ -0.57
UBE3B-207ENST00000537063 ARFGEF2Q9Y6D5 1785 aa11.47□□□□□ -0.57
UBE3B-207ENST00000537063 NBPF7P0C2Y1 421 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-207ENST00000537063 TATP17735 454 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-207ENST00000537063 KSR2Q6VAB6 950 aa11.47□□□□□ -0.57
UBE3B-207ENST00000537063 K7ELQ4 463 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-207ENST00000537063 RABEP1Q15276 862 aa11.47□□□□□ -0.57
UBE3B-207ENST00000537063 BRINP3Q76B58 766 aa11.47□□□□□ -0.57
UBE3B-207ENST00000537063 PPP1R42Q7Z4L9 355 aa11.47□□□□□ -0.57
UBE3B-207ENST00000537063 IL17RAQ96F46 866 aa11.47□□□□□ -0.57
UBE3B-207ENST00000537063 USP42Q9H9J4 1324 aaKnown RBP11.46□□□□□ -0.57
UBE3B-207ENST00000537063 DDX21Q9NR30 783 aaKnown RBP eCLIP11.46□□□□□ -0.57
UBE3B-207ENST00000537063 SOS2Q07890 1332 aaPredicted RBP11.46□□□□□ -0.57
UBE3B-207ENST00000537063 ZNF790Q6PG37 636 aa11.46□□□□□ -0.58
UBE3B-207ENST00000537063 NLRP2Q9NX02 1062 aa11.46□□□□□ -0.58
UBE3B-207ENST00000537063 PRAMEF22A3QJZ6 481 aa11.46□□□□□ -0.58
UBE3B-207ENST00000537063 COL5A2P05997 1499 aaPredicted RBP11.45□□□□□ -0.58
UBE3B-207ENST00000537063 ERC2O15083 957 aa11.45□□□□□ -0.58
UBE3B-207ENST00000537063 REC8O95072 547 aa11.45□□□□□ -0.58
UBE3B-207ENST00000537063 ANXA1P04083 346 aa11.45□□□□□ -0.58
UBE3B-207ENST00000537063 HSPA2P54652 639 aa11.45□□□□□ -0.58
UBE3B-207ENST00000537063 IFNL2Q8IZJ0 200 aa11.45□□□□□ -0.58
UBE3B-207ENST00000537063 NUP188Q5SRE5 1749 aa11.45□□□□□ -0.58
UBE3B-207ENST00000537063 DCAF5Q96JK2 942 aa11.45□□□□□ -0.58
UBE3B-207ENST00000537063 MAP3K2Q9Y2U5 619 aa11.45□□□□□ -0.58
UBE3B-207ENST00000537063 LRP10Q7Z4F1 713 aa11.45□□□□□ -0.58
UBE3B-207ENST00000537063 RBM42Q9BTD8 480 aaKnown RBP11.45□□□□□ -0.58
UBE3B-207ENST00000537063 AFDNP55196 1824 aaKnown RBP11.44□□□□□ -0.58
UBE3B-207ENST00000537063 CYP27B1O15528 508 aa11.44□□□□□ -0.58
UBE3B-207ENST00000537063 CABLES1Q8TDN4 633 aa11.44□□□□□ -0.58
UBE3B-207ENST00000537063 EPB41L2O43491 1005 aaKnown RBP11.44□□□□□ -0.58
UBE3B-207ENST00000537063 PLEKHG5O94827 1062 aa11.43□□□□□ -0.58
UBE3B-207ENST00000537063 LINS1Q8NG48 757 aa11.43□□□□□ -0.58
UBE3B-207ENST00000537063 RHPN1Q8TCX5 695 aa11.43□□□□□ -0.58
UBE3B-207ENST00000537063 KIF1BPQ96EK5 621 aa11.43□□□□□ -0.58
UBE3B-207ENST00000537063 SRGAP3O43295 1099 aa11.43□□□□□ -0.58
UBE3B-207ENST00000537063 MCM4P33991 863 aa11.43□□□□□ -0.58
UBE3B-207ENST00000537063 PI4K2BQ8TCG2 481 aa11.43□□□□□ -0.58
UBE3B-207ENST00000537063 ESYT1Q9BSJ8 1104 aa11.43□□□□□ -0.58
UBE3B-207ENST00000537063 COL15A1P39059 1388 aa11.43□□□□□ -0.58
UBE3B-207ENST00000537063 HSP90AB1P08238 724 aaKnown RBP11.43□□□□□ -0.58
UBE3B-207ENST00000537063 HSP90AB4PQ58FF6 505 aa11.43□□□□□ -0.58
UBE3B-207ENST00000537063 SPRYD3Q8NCJ5 442 aa11.43□□□□□ -0.58
UBE3B-207ENST00000537063 WDR17Q8IZU2 1322 aa11.43□□□□□ -0.58
UBE3B-207ENST00000537063 KCPQ6ZWJ8 1503 aa11.42□□□□□ -0.58
UBE3B-207ENST00000537063 CHMLP26374 656 aa11.42□□□□□ -0.58
UBE3B-207ENST00000537063 RAB3GAP1Q15042 981 aa11.42□□□□□ -0.58
UBE3B-207ENST00000537063 TOGARAM1Q9Y4F4 1720 aa11.42□□□□□ -0.58
UBE3B-207ENST00000537063 CHRNA2Q15822 529 aa11.42□□□□□ -0.58
UBE3B-207ENST00000537063 TSHZ3Q63HK5 1081 aa11.42□□□□□ -0.58
UBE3B-207ENST00000537063 HDAC5Q9UQL6 1122 aa11.42□□□□□ -0.58
UBE3B-207ENST00000537063 SURF6O75683 361 aaKnown RBP11.42□□□□□ -0.58
UBE3B-207ENST00000537063 DDX58O95786 925 aaKnown RBP11.42□□□□□ -0.58
UBE3B-207ENST00000537063 NFATC2IPQ8NCF5 419 aa11.41□□□□□ -0.58
UBE3B-207ENST00000537063 TJP1Q07157 1748 aa11.41□□□□□ -0.58
UBE3B-207ENST00000537063 KAZALD1Q96I82 304 aa11.41□□□□□ -0.58
UBE3B-207ENST00000537063 SLC39A6Q13433 755 aa11.41□□□□□ -0.58
UBE3B-207ENST00000537063 CLEC17AQ6ZS10 378 aa11.41□□□□□ -0.58
UBE3B-207ENST00000537063 ZNF496Q96IT1 587 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-207ENST00000537063 TNS2Q63HR2 1409 aa11.4□□□□□ -0.58
UBE3B-207ENST00000537063 GRM8O00222 908 aa11.4□□□□□ -0.58
UBE3B-207ENST00000537063 CSB-PGBD3P0DP91 1061 aa11.4□□□□□ -0.58
UBE3B-207ENST00000537063 UNC5CLQ8IV45 518 aa11.4□□□□□ -0.58
UBE3B-207ENST00000537063 TTC41PQ6P2S7 1318 aa11.4□□□□□ -0.58
UBE3B-207ENST00000537063 PLCH1Q4KWH8 1693 aa11.4□□□□□ -0.58
UBE3B-207ENST00000537063 IGKV5-2P06315 115 aa11.4□□□□□ -0.58
UBE3B-207ENST00000537063 CWF19L2Q2TBE0 894 aaKnown RBP11.4□□□□□ -0.58
UBE3B-207ENST00000537063 IL1RAPL2Q9NP60 686 aa11.4□□□□□ -0.58
UBE3B-207ENST00000537063 KDM4FA0A1W2PPD8 638 aa11.4□□□□□ -0.59
UBE3B-207ENST00000537063 SNRPA1P09661 255 aaKnown RBP11.4□□□□□ -0.59
UBE3B-207ENST00000537063 ANAPC15P60006 121 aa11.4□□□□□ -0.59
UBE3B-207ENST00000537063 NKX1-1Q15270 411 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-207ENST00000537063 SLAIN2Q9P270 581 aa11.39□□□□□ -0.59
UBE3B-207ENST00000537063 PCDH11XQ9BZA7 1347 aa11.39□□□□□ -0.59
UBE3B-207ENST00000537063 PCDH11YQ9BZA8 1340 aa11.39□□□□□ -0.59
UBE3B-207ENST00000537063 LARP1Q6PKG0 1096 aaKnown RBP11.39□□□□□ -0.59
UBE3B-207ENST00000537063 IL27Q8NEV9 243 aa11.39□□□□□ -0.59
UBE3B-207ENST00000537063 ERBB4Q15303 1308 aa11.39□□□□□ -0.59
UBE3B-207ENST00000537063 NUTM1Q86Y26 1132 aa11.39□□□□□ -0.59
UBE3B-207ENST00000537063 ERC1Q8IUD2 1116 aa11.39□□□□□ -0.59
UBE3B-207ENST00000537063 SUCLG2Q96I99 432 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms