RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 TTC5Q8N0Z6 440 aa26.47■■□□□ 1.83
TNFRSF1B-204ENST00000536782 PIM2Q9P1W9 311 aa26.47■■□□□ 1.83
TNFRSF1B-204ENST00000536782 UBR2Q8IWV8 1755 aa26.46■■□□□ 1.83
TNFRSF1B-204ENST00000536782 GNAT3A8MTJ3 354 aa26.46■■□□□ 1.83
TNFRSF1B-204ENST00000536782 POLRMTO00411 1230 aaKnown RBP26.46■■□□□ 1.83
TNFRSF1B-204ENST00000536782 NARFQ9UHQ1 456 aa26.46■■□□□ 1.83
TNFRSF1B-204ENST00000536782 ZBTB1Q9Y2K1 713 aa26.46■■□□□ 1.83
TNFRSF1B-204ENST00000536782 COL15A1P39059 1388 aa26.46■■□□□ 1.83
TNFRSF1B-204ENST00000536782 SBF1O95248 1867 aa26.45■■□□□ 1.83
TNFRSF1B-204ENST00000536782 TEFQ10587 303 aa26.45■■□□□ 1.82
TNFRSF1B-204ENST00000536782 DALRD3Q5D0E6 543 aaKnown RBP26.43■■□□□ 1.82
TNFRSF1B-204ENST00000536782 IL17REQ8NFR9 667 aa26.43■■□□□ 1.82
TNFRSF1B-204ENST00000536782 CFAP53Q96M91 514 aa26.43■■□□□ 1.82
TNFRSF1B-204ENST00000536782 STARD3NLO95772 234 aa26.42■■□□□ 1.82
TNFRSF1B-204ENST00000536782 HSPA6P17066 643 aa26.42■■□□□ 1.82
TNFRSF1B-204ENST00000536782 CANXP27824 592 aaKnown RBP26.41■■□□□ 1.82
TNFRSF1B-204ENST00000536782 NFIXQ14938 502 aa26.41■■□□□ 1.82
TNFRSF1B-204ENST00000536782 NRXN2Q9P2S2 1712 aa26.41■■□□□ 1.82
TNFRSF1B-204ENST00000536782 CHRNA5P30532 468 aa26.4■■□□□ 1.82
TNFRSF1B-204ENST00000536782 ZNF790Q6PG37 636 aa26.4■■□□□ 1.82
TNFRSF1B-204ENST00000536782 SIPA1L3O60292 1781 aaPredicted RBP26.39■■□□□ 1.82
TNFRSF1B-204ENST00000536782 ZNF496Q96IT1 587 aaPredicted RBP26.39■■□□□ 1.82
TNFRSF1B-204ENST00000536782 PRKAR2BP31323 418 aa26.38■■□□□ 1.81
TNFRSF1B-204ENST00000536782 TEX13AQ9BXU3 409 aaPredicted RBP26.38■■□□□ 1.81
TNFRSF1B-204ENST00000536782 BCL2L12Q9HB09 334 aa26.38■■□□□ 1.81
TNFRSF1B-204ENST00000536782 NUDCQ9Y266 331 aa26.38■■□□□ 1.81
TNFRSF1B-204ENST00000536782 HEG1Q9ULI3 1381 aa26.37■■□□□ 1.81
TNFRSF1B-204ENST00000536782 PHACTR3Q96KR7 559 aa26.37■■□□□ 1.81
TNFRSF1B-204ENST00000536782 DLEC1Q9Y238 1755 aa26.36■■□□□ 1.81
TNFRSF1B-204ENST00000536782 A0A087WZG4 1122 aa26.36■■□□□ 1.81
TNFRSF1B-204ENST00000536782 SERPINB2P05120 415 aa26.36■■□□□ 1.81
TNFRSF1B-204ENST00000536782 EIF5P55010 431 aaKnown RBP26.36■■□□□ 1.81
TNFRSF1B-204ENST00000536782 C9orf131Q5VYM1 1079 aa26.36■■□□□ 1.81
TNFRSF1B-204ENST00000536782 RSPH6AQ9H0K4 717 aa26.36■■□□□ 1.81
TNFRSF1B-204ENST00000536782 CEMIPQ8WUJ3 1361 aa26.35■■□□□ 1.81
TNFRSF1B-204ENST00000536782 FMNL2Q96PY5 1086 aa26.34■■□□□ 1.81
TNFRSF1B-204ENST00000536782 PPP2R1AP30153 589 aa26.33■■□□□ 1.81
TNFRSF1B-204ENST00000536782 NMRK2Q9NPI5 230 aa26.33■■□□□ 1.81
TNFRSF1B-204ENST00000536782 CCDC88AQ3V6T2 1871 aa26.32■■□□□ 1.8
TNFRSF1B-204ENST00000536782 BTBD11A6QL63 1104 aa26.31■■□□□ 1.8
TNFRSF1B-204ENST00000536782 U2AF1L5P0DN76 240 aaPredicted RBP26.31■■□□□ 1.8
TNFRSF1B-204ENST00000536782 U2AF1Q01081 240 aaKnown RBP eCLIP26.31■■□□□ 1.8
TNFRSF1B-204ENST00000536782 BICDL1Q6ZP65 573 aa26.31■■□□□ 1.8
TNFRSF1B-204ENST00000536782 ZNF330Q9Y3S2 320 aaPredicted RBP26.31■■□□□ 1.8
TNFRSF1B-204ENST00000536782 IL6STP40189 918 aaPredicted RBP26.3■■□□□ 1.8
TNFRSF1B-204ENST00000536782 TOMM70O94826 608 aa26.29■■□□□ 1.8
TNFRSF1B-204ENST00000536782 NPM2Q86SE8 214 aaKnown RBP26.29■■□□□ 1.8
TNFRSF1B-204ENST00000536782 RNF181Q9P0P0 153 aa26.29■■□□□ 1.8
TNFRSF1B-204ENST00000536782 ANKRD31Q8N7Z5 1873 aa26.29■■□□□ 1.8
TNFRSF1B-204ENST00000536782 RTF1Q92541 710 aaKnown RBP26.28■■□□□ 1.8
TNFRSF1B-204ENST00000536782 TBC1D2BQ9UPU7 963 aa26.28■■□□□ 1.8
TNFRSF1B-204ENST00000536782 KCNQ3O43525 872 aa26.27■■□□□ 1.8
TNFRSF1B-204ENST00000536782 TBC1D9BQ66K14 1250 aa26.27■■□□□ 1.8
TNFRSF1B-204ENST00000536782 C2CD5Q86YS7 1000 aa26.27■■□□□ 1.8
TNFRSF1B-204ENST00000536782 H0YIN7 160 aa26.26■■□□□ 1.79
TNFRSF1B-204ENST00000536782 A1BGP04217 495 aa26.26■■□□□ 1.79
TNFRSF1B-204ENST00000536782 SCN7AQ01118 1682 aa26.25■■□□□ 1.79
TNFRSF1B-204ENST00000536782 TTLL6Q8N841 843 aa26.25■■□□□ 1.79
TNFRSF1B-204ENST00000536782 CARMIL3Q8ND23 1372 aa26.24■■□□□ 1.79
TNFRSF1B-204ENST00000536782 KDM2BQ8NHM5 1336 aa26.24■■□□□ 1.79
TNFRSF1B-204ENST00000536782 MCM10Q7L590 875 aa26.24■■□□□ 1.79
TNFRSF1B-204ENST00000536782 WDR90Q96KV7 1748 aa26.23■■□□□ 1.79
TNFRSF1B-204ENST00000536782 TNRC6CQ9HCJ0 1690 aaKnown RBP26.23■■□□□ 1.79
TNFRSF1B-204ENST00000536782 PRELPP51888 382 aa26.22■■□□□ 1.79
TNFRSF1B-204ENST00000536782 HTATSF1O43719 755 aaKnown RBP26.21■■□□□ 1.79
TNFRSF1B-204ENST00000536782 RASSF7Q02833 373 aa26.21■■□□□ 1.79
TNFRSF1B-204ENST00000536782 IFFO2Q5TF58 517 aa26.21■■□□□ 1.79
TNFRSF1B-204ENST00000536782 C16orf71Q8IYS4 520 aaPredicted RBP26.21■■□□□ 1.79
TNFRSF1B-204ENST00000536782 DNAJC5GQ8N7S2 189 aa26.21■■□□□ 1.79
TNFRSF1B-204ENST00000536782 BRIP1Q9BX63 1249 aa26.21■■□□□ 1.79
TNFRSF1B-204ENST00000536782 PDZRN3Q9UPQ7 1066 aa26.21■■□□□ 1.79
TNFRSF1B-204ENST00000536782 USP16Q9Y5T5 823 aa26.21■■□□□ 1.79
TNFRSF1B-204ENST00000536782 COL11A2P13942 1736 aaPredicted RBP26.2■■□□□ 1.79
TNFRSF1B-204ENST00000536782 CAMTA2O94983 1202 aa26.2■■□□□ 1.78
TNFRSF1B-204ENST00000536782 SNRPA1P09661 255 aaKnown RBP26.2■■□□□ 1.78
TNFRSF1B-204ENST00000536782 PDE6BP35913 854 aa26.2■■□□□ 1.78
TNFRSF1B-204ENST00000536782 APLP1P51693 650 aa26.2■■□□□ 1.78
TNFRSF1B-204ENST00000536782 PRR5LQ6MZQ0 368 aa26.2■■□□□ 1.78
TNFRSF1B-204ENST00000536782 SETDB2Q96T68 719 aa26.2■■□□□ 1.78
TNFRSF1B-204ENST00000536782 LMNB1P20700 586 aa26.19■■□□□ 1.78
TNFRSF1B-204ENST00000536782 DCTN1Q14203 1278 aa26.19■■□□□ 1.78
TNFRSF1B-204ENST00000536782 DZIP3Q86Y13 1208 aaKnown RBP26.19■■□□□ 1.78
TNFRSF1B-204ENST00000536782 RBM46Q8TBY0 533 aaKnown RBP26.19■■□□□ 1.78
TNFRSF1B-204ENST00000536782 ZC3H4Q9UPT8 1303 aaKnown RBP26.18■■□□□ 1.78
TNFRSF1B-204ENST00000536782 ZNF622Q969S3 477 aaKnown RBP eCLIP26.18■■□□□ 1.78
TNFRSF1B-204ENST00000536782 BCORQ6W2J9 1755 aa26.18■■□□□ 1.78
TNFRSF1B-204ENST00000536782 TIAM2Q8IVF5 1701 aa26.17■■□□□ 1.78
TNFRSF1B-204ENST00000536782 PRAMEF22A3QJZ6 481 aa26.17■■□□□ 1.78
TNFRSF1B-204ENST00000536782 NPHP1O15259 732 aa26.17■■□□□ 1.78
TNFRSF1B-204ENST00000536782 PIP4K2AP48426 406 aaPredicted RBP26.17■■□□□ 1.78
TNFRSF1B-204ENST00000536782 CCDC24Q8N4L8 307 aa26.17■■□□□ 1.78
TNFRSF1B-204ENST00000536782 RRAGCQ9HB90 399 aa26.17■■□□□ 1.78
TNFRSF1B-204ENST00000536782 DICER1Q9UPY3 1922 aaKnown RBP26.17■■□□□ 1.78
TNFRSF1B-204ENST00000536782 NEFMP07197 916 aa26.16■■□□□ 1.78
TNFRSF1B-204ENST00000536782 CNBD1Q8NA66 436 aa26.16■■□□□ 1.78
TNFRSF1B-204ENST00000536782 FER1L6Q2WGJ9 1857 aa26.16■■□□□ 1.78
TNFRSF1B-204ENST00000536782 CACNA1SQ13698 1873 aa26.15■■□□□ 1.78
TNFRSF1B-204ENST00000536782 ST5P78524 1137 aa26.14■■□□□ 1.78
TNFRSF1B-204ENST00000536782 TAF7Q15545 349 aaPredicted RBP26.14■■□□□ 1.78
TNFRSF1B-204ENST00000536782 CLEC4GQ6UXB4 293 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms