RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 FMNL2Q96PY5 1086 aa23.69■■□□□ 1.38
TNFRSF1A-209ENST00000536717 YY1P25490 414 aa23.68■■□□□ 1.38
TNFRSF1A-209ENST00000536717 PRKRIP1Q9H875 184 aaPredicted RBP23.68■■□□□ 1.38
TNFRSF1A-209ENST00000536717 COL15A1P39059 1388 aa23.68■■□□□ 1.38
TNFRSF1A-209ENST00000536717 KDM3BQ7LBC6 1761 aa23.67■■□□□ 1.38
TNFRSF1A-209ENST00000536717 N4BP2Q86UW6 1770 aaPredicted RBP23.67■■□□□ 1.38
TNFRSF1A-209ENST00000536717 STARD3NLO95772 234 aa23.66■■□□□ 1.38
TNFRSF1A-209ENST00000536717 FKBP8Q14318 412 aa23.66■■□□□ 1.38
TNFRSF1A-209ENST00000536717 NFE2L2Q16236 605 aa23.66■■□□□ 1.38
TNFRSF1A-209ENST00000536717 PNNQ9H307 717 aaKnown RBP23.66■■□□□ 1.38
TNFRSF1A-209ENST00000536717 MAPK8IP3Q9UPT6 1336 aa23.65■■□□□ 1.38
TNFRSF1A-209ENST00000536717 PELP1Q8IZL8 1130 aaKnown RBP23.65■■□□□ 1.38
TNFRSF1A-209ENST00000536717 TEX13AQ9BXU3 409 aaPredicted RBP23.65■■□□□ 1.38
TNFRSF1A-209ENST00000536717 AFDNP55196 1824 aaKnown RBP23.64■■□□□ 1.38
TNFRSF1A-209ENST00000536717 YBX3P16989 372 aaKnown RBP eCLIP23.64■■□□□ 1.38
TNFRSF1A-209ENST00000536717 CANXP27824 592 aaKnown RBP23.64■■□□□ 1.38
TNFRSF1A-209ENST00000536717 USPL1Q5W0Q7 1092 aa23.64■■□□□ 1.37
TNFRSF1A-209ENST00000536717 C10orf71Q711Q0 1435 aa23.63■■□□□ 1.37
TNFRSF1A-209ENST00000536717 BRCA1P38398 1863 aaKnown RBP23.63■■□□□ 1.37
TNFRSF1A-209ENST00000536717 ZPR1O75312 459 aa23.63■■□□□ 1.37
TNFRSF1A-209ENST00000536717 EIF5P55010 431 aaKnown RBP23.63■■□□□ 1.37
TNFRSF1A-209ENST00000536717 TAF7Q15545 349 aaPredicted RBP23.63■■□□□ 1.37
TNFRSF1A-209ENST00000536717 NARFQ9UHQ1 456 aa23.63■■□□□ 1.37
TNFRSF1A-209ENST00000536717 PARP3Q9Y6F1 533 aa23.62■■□□□ 1.37
TNFRSF1A-209ENST00000536717 PRAMEF22A3QJZ6 481 aa23.61■■□□□ 1.37
TNFRSF1A-209ENST00000536717 DDR1Q08345 913 aa23.61■■□□□ 1.37
TNFRSF1A-209ENST00000536717 LAMB4A4D0S4 1761 aa23.61■■□□□ 1.37
TNFRSF1A-209ENST00000536717 SCN7AQ01118 1682 aa23.6■■□□□ 1.37
TNFRSF1A-209ENST00000536717 PXDNLA1KZ92 1463 aa23.6■■□□□ 1.37
TNFRSF1A-209ENST00000536717 THUMPD2Q9BTF0 503 aaKnown RBP23.6■■□□□ 1.37
TNFRSF1A-209ENST00000536717 BCL2L12Q9HB09 334 aa23.6■■□□□ 1.37
TNFRSF1A-209ENST00000536717 MIS18AQ9NYP9 233 aa23.6■■□□□ 1.37
TNFRSF1A-209ENST00000536717 USP16Q9Y5T5 823 aa23.6■■□□□ 1.37
TNFRSF1A-209ENST00000536717 A1BGP04217 495 aa23.59■■□□□ 1.37
TNFRSF1A-209ENST00000536717 TM4SF1P30408 202 aa23.59■■□□□ 1.37
TNFRSF1A-209ENST00000536717 NRXN2Q9P2S2 1712 aa23.59■■□□□ 1.37
TNFRSF1A-209ENST00000536717 BCORQ6W2J9 1755 aa23.58■■□□□ 1.36
TNFRSF1A-209ENST00000536717 ANP32CO43423 234 aa23.58■■□□□ 1.36
TNFRSF1A-209ENST00000536717 SNRPA1P09661 255 aaKnown RBP23.58■■□□□ 1.36
TNFRSF1A-209ENST00000536717 IL6STP40189 918 aaPredicted RBP23.58■■□□□ 1.36
TNFRSF1A-209ENST00000536717 POLRMTO00411 1230 aaKnown RBP23.57■■□□□ 1.36
TNFRSF1A-209ENST00000536717 WWC3Q9ULE0 1092 aa23.57■■□□□ 1.36
TNFRSF1A-209ENST00000536717 GRIN3BO60391 1043 aa23.56■■□□□ 1.36
TNFRSF1A-209ENST00000536717 TMPOP42166 694 aaKnown RBP23.56■■□□□ 1.36
TNFRSF1A-209ENST00000536717 RIPK4P57078 832 aa23.56■■□□□ 1.36
TNFRSF1A-209ENST00000536717 CCDC146Q8IYE0 955 aa23.56■■□□□ 1.36
TNFRSF1A-209ENST00000536717 A0A087WZG4 1122 aa23.55■■□□□ 1.36
TNFRSF1A-209ENST00000536717 TGFB2P61812 414 aa23.55■■□□□ 1.36
TNFRSF1A-209ENST00000536717 NFIXQ14938 502 aa23.55■■□□□ 1.36
TNFRSF1A-209ENST00000536717 WDR43Q15061 677 aaKnown RBP eCLIP23.55■■□□□ 1.36
TNFRSF1A-209ENST00000536717 ADAMTS8Q9UP79 889 aa23.55■■□□□ 1.36
TNFRSF1A-209ENST00000536717 PNISRQ8TF01 805 aaKnown RBP23.54■■□□□ 1.36
TNFRSF1A-209ENST00000536717 ZNF330Q9Y3S2 320 aaPredicted RBP23.54■■□□□ 1.36
TNFRSF1A-209ENST00000536717 PIP4K2AP48426 406 aaPredicted RBP23.54■■□□□ 1.36
TNFRSF1A-209ENST00000536717 DIEXFQ68CQ4 756 aaKnown RBP23.54■■□□□ 1.36
TNFRSF1A-209ENST00000536717 TBC1D2BQ9UPU7 963 aa23.54■■□□□ 1.36
TNFRSF1A-209ENST00000536717 A0A0G2JLW4 131 aa23.53■■□□□ 1.36
TNFRSF1A-209ENST00000536717 RUNDC1Q96C34 613 aa23.52■■□□□ 1.36
TNFRSF1A-209ENST00000536717 RRP7AQ9Y3A4 280 aaKnown RBP23.52■■□□□ 1.36
TNFRSF1A-209ENST00000536717 ARFGEF1Q9Y6D6 1849 aa23.52■■□□□ 1.36
TNFRSF1A-209ENST00000536717 DPEP1P16444 411 aa23.51■■□□□ 1.35
TNFRSF1A-209ENST00000536717 EIF4A1P60842 406 aaKnown RBP23.51■■□□□ 1.35
TNFRSF1A-209ENST00000536717 NBPF26B4DH59 902 aa23.49■■□□□ 1.35
TNFRSF1A-209ENST00000536717 GIGYF1O75420 1035 aaPredicted RBP23.49■■□□□ 1.35
TNFRSF1A-209ENST00000536717 CAMTA2O94983 1202 aa23.49■■□□□ 1.35
TNFRSF1A-209ENST00000536717 KCNA3P22001 575 aa23.49■■□□□ 1.35
TNFRSF1A-209ENST00000536717 NBPF10Q6P3W6 841 aaKnown RBP23.49■■□□□ 1.35
TNFRSF1A-209ENST00000536717 NBPF15Q8N660 670 aa23.49■■□□□ 1.35
TNFRSF1A-209ENST00000536717 ANKRD31Q8N7Z5 1873 aa23.49■■□□□ 1.35
TNFRSF1A-209ENST00000536717 LMOD3Q0VAK6 560 aa23.49■■□□□ 1.35
TNFRSF1A-209ENST00000536717 NEUROD2Q15784 382 aa23.49■■□□□ 1.35
TNFRSF1A-209ENST00000536717 TBC1D9BQ66K14 1250 aa23.49■■□□□ 1.35
TNFRSF1A-209ENST00000536717 DLEC1Q9Y238 1755 aa23.48■■□□□ 1.35
TNFRSF1A-209ENST00000536717 SERPINB2P05120 415 aa23.48■■□□□ 1.35
TNFRSF1A-209ENST00000536717 BICDL1Q6ZP65 573 aa23.48■■□□□ 1.35
TNFRSF1A-209ENST00000536717 NPM2Q86SE8 214 aaKnown RBP23.48■■□□□ 1.35
TNFRSF1A-209ENST00000536717 DZIP3Q86Y13 1208 aaKnown RBP23.48■■□□□ 1.35
TNFRSF1A-209ENST00000536717 ZNF784Q8NCA9 323 aaPredicted RBP23.48■■□□□ 1.35
TNFRSF1A-209ENST00000536717 TSPYL4Q9UJ04 414 aa23.47■■□□□ 1.35
TNFRSF1A-209ENST00000536717 TRIM35Q9UPQ4 493 aa23.47■■□□□ 1.35
TNFRSF1A-209ENST00000536717 NUP98P52948 1817 aa23.45■■□□□ 1.34
TNFRSF1A-209ENST00000536717 CCDC184Q52MB2 194 aa23.45■■□□□ 1.34
TNFRSF1A-209ENST00000536717 BCS1LQ9Y276 419 aa23.45■■□□□ 1.34
TNFRSF1A-209ENST00000536717 CARMIL3Q8ND23 1372 aa23.44■■□□□ 1.34
TNFRSF1A-209ENST00000536717 CHRNA5P30532 468 aa23.43■■□□□ 1.34
TNFRSF1A-209ENST00000536717 BABAM1Q9NWV8 329 aa23.43■■□□□ 1.34
TNFRSF1A-209ENST00000536717 PIM2Q9P1W9 311 aa23.42■■□□□ 1.34
TNFRSF1A-209ENST00000536717 CLEC4GQ6UXB4 293 aa23.4■■□□□ 1.34
TNFRSF1A-209ENST00000536717 COL11A2P13942 1736 aaPredicted RBP23.4■■□□□ 1.34
TNFRSF1A-209ENST00000536717 SETDB2Q96T68 719 aa23.39■■□□□ 1.34
TNFRSF1A-209ENST00000536717 CHL1O00533 1208 aa23.38■■□□□ 1.33
TNFRSF1A-209ENST00000536717 APAF1O14727 1248 aa23.38■■□□□ 1.33
TNFRSF1A-209ENST00000536717 PRR5LQ6MZQ0 368 aa23.38■■□□□ 1.33
TNFRSF1A-209ENST00000536717 SBF1O95248 1867 aa23.37■■□□□ 1.33
TNFRSF1A-209ENST00000536717 RGL2O15211 777 aa23.37■■□□□ 1.33
TNFRSF1A-209ENST00000536717 DALRD3Q5D0E6 543 aaKnown RBP23.37■■□□□ 1.33
TNFRSF1A-209ENST00000536717 ZNF652Q9Y2D9 606 aa23.37■■□□□ 1.33
TNFRSF1A-209ENST00000536717 ADCY9O60503 1353 aa23.37■■□□□ 1.33
TNFRSF1A-209ENST00000536717 CACNA1SQ13698 1873 aa23.36■■□□□ 1.33
TNFRSF1A-209ENST00000536717 HLFQ16534 295 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms