RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 TTC5Q8N0Z6 440 aa16.38■□□□□ 0.21
CDK5RAP3-202ENST00000536708 ZNF428Q96B54 188 aa16.38■□□□□ 0.21
CDK5RAP3-202ENST00000536708 GIGYF1O75420 1035 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-202ENST00000536708 EIF2S2P20042 333 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-202ENST00000536708 HDGFL1Q5TGJ6 251 aa16.37■□□□□ 0.21
CDK5RAP3-202ENST00000536708 TJP1Q07157 1748 aa16.37■□□□□ 0.21
CDK5RAP3-202ENST00000536708 RGS12O14924 1447 aa16.37■□□□□ 0.21
CDK5RAP3-202ENST00000536708 PRIM1P49642 420 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-202ENST00000536708 ASAP1Q9ULH1 1129 aa16.37■□□□□ 0.21
CDK5RAP3-202ENST00000536708 PTCD1O75127 700 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-202ENST00000536708 ANXA1P04083 346 aa16.36■□□□□ 0.21
CDK5RAP3-202ENST00000536708 ZKSCAN2Q63HK3 967 aa16.36■□□□□ 0.21
CDK5RAP3-202ENST00000536708 G2E3Q7L622 706 aa16.36■□□□□ 0.21
CDK5RAP3-202ENST00000536708 COG6Q9Y2V7 657 aa16.36■□□□□ 0.21
CDK5RAP3-202ENST00000536708 N4BP2Q86UW6 1770 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-202ENST00000536708 SEPT12Q8IYM1 358 aa16.35■□□□□ 0.21
CDK5RAP3-202ENST00000536708 CHPF2Q9P2E5 772 aa16.35■□□□□ 0.21
CDK5RAP3-202ENST00000536708 KCNQ2O43526 872 aa16.35■□□□□ 0.21
CDK5RAP3-202ENST00000536708 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
CDK5RAP3-202ENST00000536708 PROSER3Q2NL68 480 aa16.34■□□□□ 0.21
CDK5RAP3-202ENST00000536708 ATF7IPQ6VMQ6 1270 aa16.34■□□□□ 0.21
CDK5RAP3-202ENST00000536708 PTF1AQ7RTS3 328 aa16.34■□□□□ 0.21
CDK5RAP3-202ENST00000536708 BRPF1P55201 1214 aaPredicted RBP16.33■□□□□ 0.21
CDK5RAP3-202ENST00000536708 FMNL2Q96PY5 1086 aa16.33■□□□□ 0.21
CDK5RAP3-202ENST00000536708 ATG3Q9NT62 314 aa16.33■□□□□ 0.21
CDK5RAP3-202ENST00000536708 HOXB7P09629 217 aa16.33■□□□□ 0.2
CDK5RAP3-202ENST00000536708 PIP4K2AP48426 406 aaPredicted RBP16.33■□□□□ 0.2
CDK5RAP3-202ENST00000536708 CCDC30Q5VVM6 783 aa16.33■□□□□ 0.2
CDK5RAP3-202ENST00000536708 STK31Q9BXU1 1019 aa16.33■□□□□ 0.2
CDK5RAP3-202ENST00000536708 ONECUT3O60422 494 aaPredicted RBP16.32■□□□□ 0.2
CDK5RAP3-202ENST00000536708 FTSJ3Q8IY81 847 aaKnown RBP16.32■□□□□ 0.2
CDK5RAP3-202ENST00000536708 PHAXQ9H814 394 aaKnown RBP16.32■□□□□ 0.2
CDK5RAP3-202ENST00000536708 RGS17Q9UGC6 210 aaPredicted RBP16.32■□□□□ 0.2
CDK5RAP3-202ENST00000536708 SOS1Q07889 1333 aaPredicted RBP16.32■□□□□ 0.2
CDK5RAP3-202ENST00000536708 RGS3P49796 1198 aa16.31■□□□□ 0.2
CDK5RAP3-202ENST00000536708 DZIP1LQ8IYY4 767 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-202ENST00000536708 USP16Q9Y5T5 823 aa16.31■□□□□ 0.2
CDK5RAP3-202ENST00000536708 ZNF772Q68DY9 489 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-202ENST00000536708 TMEM57Q8N5G2 664 aa16.3■□□□□ 0.2
CDK5RAP3-202ENST00000536708 COL5A3P25940 1745 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-202ENST00000536708 ABCC4O15439 1325 aa16.29■□□□□ 0.2
CDK5RAP3-202ENST00000536708 SNRPA1P09661 255 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-202ENST00000536708 FLIIQ13045 1269 aa16.29■□□□□ 0.2
CDK5RAP3-202ENST00000536708 SLC4A9Q96Q91 983 aa16.29■□□□□ 0.2
CDK5RAP3-202ENST00000536708 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-202ENST00000536708 ARFGEF2Q9Y6D5 1785 aa16.29■□□□□ 0.2
CDK5RAP3-202ENST00000536708 F6X3S4 739 aa16.29■□□□□ 0.2
CDK5RAP3-202ENST00000536708 CICQ96RK0 1608 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-202ENST00000536708 IPO8O15397 1037 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-202ENST00000536708 MVPQ14764 893 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-202ENST00000536708 ITPRIPQ8IWB1 547 aa16.28■□□□□ 0.2
CDK5RAP3-202ENST00000536708 PCDHB15Q9Y5E8 787 aa16.28■□□□□ 0.2
CDK5RAP3-202ENST00000536708 PDIA6Q15084 440 aa16.27■□□□□ 0.2
CDK5RAP3-202ENST00000536708 LY75O60449 1722 aa16.27■□□□□ 0.2
CDK5RAP3-202ENST00000536708 NUP188Q5SRE5 1749 aa16.27■□□□□ 0.2
CDK5RAP3-202ENST00000536708 PALLDQ8WX93 1383 aa16.27■□□□□ 0.2
CDK5RAP3-202ENST00000536708 MYH14Q7Z406 1995 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-202ENST00000536708 MYL6BP14649 208 aa16.27■□□□□ 0.19
CDK5RAP3-202ENST00000536708 RBM6P78332 1123 aaKnown RBP16.27■□□□□ 0.19
CDK5RAP3-202ENST00000536708 FKBP5Q13451 457 aaPredicted RBP16.27■□□□□ 0.19
CDK5RAP3-202ENST00000536708 POTEAQ6S8J7 498 aa16.27■□□□□ 0.19
CDK5RAP3-202ENST00000536708 ARHGAP45Q92619 1136 aa16.27■□□□□ 0.19
CDK5RAP3-202ENST00000536708 PTPRCP08575 1304 aa16.26■□□□□ 0.19
CDK5RAP3-202ENST00000536708 DNAJC10Q8IXB1 793 aa16.26■□□□□ 0.19
CDK5RAP3-202ENST00000536708 RWDD1Q9H446 243 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP3-202ENST00000536708 DBF4Q9UBU7 674 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP3-202ENST00000536708 TAF1LQ8IZX4 1826 aa16.25■□□□□ 0.19
CDK5RAP3-202ENST00000536708 API5Q9BZZ5 524 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-202ENST00000536708 ADCY9O60503 1353 aa16.25■□□□□ 0.19
CDK5RAP3-202ENST00000536708 AFDNP55196 1824 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-202ENST00000536708 NBPF26B4DH59 902 aa16.24■□□□□ 0.19
CDK5RAP3-202ENST00000536708 NBPF14Q5TI25 921 aa16.24■□□□□ 0.19
CDK5RAP3-202ENST00000536708 NBPF10Q6P3W6 841 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-202ENST00000536708 KRT27Q7Z3Y8 459 aa16.24■□□□□ 0.19
CDK5RAP3-202ENST00000536708 NBPF15Q8N660 670 aa16.24■□□□□ 0.19
CDK5RAP3-202ENST00000536708 ZNF831Q5JPB2 1677 aa16.24■□□□□ 0.19
CDK5RAP3-202ENST00000536708 RREB1Q92766 1687 aa16.24■□□□□ 0.19
CDK5RAP3-202ENST00000536708 A1BGP04217 495 aa16.24■□□□□ 0.19
CDK5RAP3-202ENST00000536708 SLC4A10Q6U841 1118 aa16.24■□□□□ 0.19
CDK5RAP3-202ENST00000536708 LRP10Q7Z4F1 713 aa16.24■□□□□ 0.19
CDK5RAP3-202ENST00000536708 DDX21Q9NR30 783 aaKnown RBP eCLIP16.24■□□□□ 0.19
CDK5RAP3-202ENST00000536708 KCNQ4P56696 695 aa16.23■□□□□ 0.19
CDK5RAP3-202ENST00000536708 AIMP1Q12904 312 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-202ENST00000536708 PXDNLA1KZ92 1463 aa16.22■□□□□ 0.19
CDK5RAP3-202ENST00000536708 RXRBP28702 533 aa16.22■□□□□ 0.19
CDK5RAP3-202ENST00000536708 XAGE3Q8WTP9 111 aa16.21■□□□□ 0.19
CDK5RAP3-202ENST00000536708 PDZRN3Q9UPQ7 1066 aa16.21■□□□□ 0.19
CDK5RAP3-202ENST00000536708 TNS1Q9HBL0 1735 aaKnown RBP16.21■□□□□ 0.19
CDK5RAP3-202ENST00000536708 LOC102724428A0A0B4J2F2 783 aa16.2■□□□□ 0.18
CDK5RAP3-202ENST00000536708 PI4KAP2A4QPH2 592 aa16.2■□□□□ 0.18
CDK5RAP3-202ENST00000536708 SIK1P57059 783 aa16.2■□□□□ 0.18
CDK5RAP3-202ENST00000536708 HDAC1Q13547 482 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ITPK1Q13572 414 aa16.2■□□□□ 0.18
CDK5RAP3-202ENST00000536708 VSIG10Q8N0Z9 540 aa16.2■□□□□ 0.18
CDK5RAP3-202ENST00000536708 PI4KAP1Q8N8J0 262 aa16.2■□□□□ 0.18
CDK5RAP3-202ENST00000536708 HYPKQ9NX55 129 aa16.2■□□□□ 0.18
CDK5RAP3-202ENST00000536708 DDX19BQ9UMR2 479 aa16.2■□□□□ 0.18
CDK5RAP3-202ENST00000536708 DAXXQ9UER7 740 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-202ENST00000536708 ZNF330Q9Y3S2 320 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-202ENST00000536708 CYP19A1P11511 503 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms