RNA–Protein interactions for RNA: ENST00000536400.5

PRKCH-202, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-202ENST00000536400 LMNB1P20700 586 aa10.37□□□□□ -0.75
PRKCH-202ENST00000536400 CRKLP46109 303 aaKnown RBP10.37□□□□□ -0.75
PRKCH-202ENST00000536400 AFDNP55196 1824 aaKnown RBP10.37□□□□□ -0.75
PRKCH-202ENST00000536400 DLEC1Q9Y238 1755 aa10.37□□□□□ -0.75
PRKCH-202ENST00000536400 TJP1Q07157 1748 aa10.36□□□□□ -0.75
PRKCH-202ENST00000536400 TIAM2Q8IVF5 1701 aa10.36□□□□□ -0.75
PRKCH-202ENST00000536400 POTECB2RU33 542 aa10.36□□□□□ -0.75
PRKCH-202ENST00000536400 SLC34A2O95436 690 aa10.36□□□□□ -0.75
PRKCH-202ENST00000536400 HSP90AB1P08238 724 aaKnown RBP10.36□□□□□ -0.75
PRKCH-202ENST00000536400 AMER1Q5JTC6 1135 aaPredicted RBP10.36□□□□□ -0.75
PRKCH-202ENST00000536400 POLKQ9UBT6 870 aa10.36□□□□□ -0.75
PRKCH-202ENST00000536400 NRXN2Q9P2S2 1712 aa10.36□□□□□ -0.75
PRKCH-202ENST00000536400 CABP4P57796 275 aa10.35□□□□□ -0.75
PRKCH-202ENST00000536400 EIF4A2Q14240 407 aaKnown RBP10.35□□□□□ -0.75
PRKCH-202ENST00000536400 PTCD1O75127 700 aaKnown RBP10.34□□□□□ -0.75
PRKCH-202ENST00000536400 CDCA8Q53HL2 280 aa10.34□□□□□ -0.75
PRKCH-202ENST00000536400 INTS5Q6P9B9 1019 aaKnown RBP10.34□□□□□ -0.75
PRKCH-202ENST00000536400 DICER1Q9UPY3 1922 aaKnown RBP10.34□□□□□ -0.75
PRKCH-202ENST00000536400 NFKBIEO00221 500 aa10.33□□□□□ -0.76
PRKCH-202ENST00000536400 SPINK5Q9NQ38 1064 aaPredicted RBP10.33□□□□□ -0.76
PRKCH-202ENST00000536400 PRDM10Q9NQV6 1147 aa10.33□□□□□ -0.76
PRKCH-202ENST00000536400 CREBZFQ9NS37 354 aa10.33□□□□□ -0.76
PRKCH-202ENST00000536400 ZNF219Q9P2Y4 722 aaPredicted RBP10.33□□□□□ -0.76
PRKCH-202ENST00000536400 FOXN1O15353 648 aa10.32□□□□□ -0.76
PRKCH-202ENST00000536400 NFIXQ14938 502 aa10.32□□□□□ -0.76
PRKCH-202ENST00000536400 AMOTQ4VCS5 1084 aa10.32□□□□□ -0.76
PRKCH-202ENST00000536400 PLEKHO1Q53GL0 409 aaPredicted RBP10.32□□□□□ -0.76
PRKCH-202ENST00000536400 USPL1Q5W0Q7 1092 aa10.32□□□□□ -0.76
PRKCH-202ENST00000536400 TTLL6Q8N841 843 aa10.32□□□□□ -0.76
PRKCH-202ENST00000536400 NFATC2IPQ8NCF5 419 aa10.32□□□□□ -0.76
PRKCH-202ENST00000536400 SOS1Q07889 1333 aaPredicted RBP10.32□□□□□ -0.76
PRKCH-202ENST00000536400 ZPR1O75312 459 aa10.31□□□□□ -0.76
PRKCH-202ENST00000536400 MTHFSP49914 203 aa10.31□□□□□ -0.76
PRKCH-202ENST00000536400 DPY19L2Q6NUT2 758 aa10.31□□□□□ -0.76
PRKCH-202ENST00000536400 ZNF530Q6P9A1 599 aaPredicted RBP10.31□□□□□ -0.76
PRKCH-202ENST00000536400 MKRN1Q9UHC7 482 aaKnown RBP10.31□□□□□ -0.76
PRKCH-202ENST00000536400 FER1L6Q2WGJ9 1857 aa10.31□□□□□ -0.76
PRKCH-202ENST00000536400 SCN11AQ9UI33 1791 aa10.31□□□□□ -0.76
PRKCH-202ENST00000536400 CNTNAP1P78357 1384 aa10.3□□□□□ -0.76
PRKCH-202ENST00000536400 DSG3P32926 999 aa10.3□□□□□ -0.76
PRKCH-202ENST00000536400 CHADLQ6NUI6 762 aa10.3□□□□□ -0.76
PRKCH-202ENST00000536400 BCL2L12Q9HB09 334 aa10.3□□□□□ -0.76
PRKCH-202ENST00000536400 NARFQ9UHQ1 456 aa10.3□□□□□ -0.76
PRKCH-202ENST00000536400 VIRMAQ69YN4 1812 aaKnown RBP10.29□□□□□ -0.76
PRKCH-202ENST00000536400 SERPINB2P05120 415 aa10.29□□□□□ -0.76
PRKCH-202ENST00000536400 C2CD5Q86YS7 1000 aa10.29□□□□□ -0.76
PRKCH-202ENST00000536400 DNAJC10Q8IXB1 793 aa10.29□□□□□ -0.76
PRKCH-202ENST00000536400 PASKQ96RG2 1323 aa10.29□□□□□ -0.76
PRKCH-202ENST00000536400 CARMIL3Q8ND23 1372 aa10.28□□□□□ -0.76
PRKCH-202ENST00000536400 ANKRD31Q8N7Z5 1873 aa10.28□□□□□ -0.76
PRKCH-202ENST00000536400 H0YIN7 160 aa10.28□□□□□ -0.76
PRKCH-202ENST00000536400 POTEIP0CG38 1075 aa10.28□□□□□ -0.76
PRKCH-202ENST00000536400 POTEJP0CG39 1038 aa10.28□□□□□ -0.76
PRKCH-202ENST00000536400 CYP19A1P11511 503 aaPredicted RBP10.28□□□□□ -0.76
PRKCH-202ENST00000536400 CTCFP49711 727 aaPredicted RBP10.28□□□□□ -0.76
PRKCH-202ENST00000536400 C1orf141Q5JVX7 400 aa10.28□□□□□ -0.76
PRKCH-202ENST00000536400 COL15A1P39059 1388 aa10.27□□□□□ -0.76
PRKCH-202ENST00000536400 TNNT2P45379 298 aaPredicted RBP10.27□□□□□ -0.77
PRKCH-202ENST00000536400 ERFEQ4G0M1 354 aa10.27□□□□□ -0.77
PRKCH-202ENST00000536400 AEBP1Q8IUX7 1158 aa10.27□□□□□ -0.77
PRKCH-202ENST00000536400 ZBTB1Q9Y2K1 713 aa10.27□□□□□ -0.77
PRKCH-202ENST00000536400 SCN4AP35499 1836 aa10.26□□□□□ -0.77
PRKCH-202ENST00000536400 VEGFBP49765 207 aa10.26□□□□□ -0.77
PRKCH-202ENST00000536400 AIDAQ96BJ3 306 aa10.26□□□□□ -0.77
PRKCH-202ENST00000536400 WBP1LQ9NX94 342 aa10.26□□□□□ -0.77
PRKCH-202ENST00000536400 PDZRN3Q9UPQ7 1066 aa10.26□□□□□ -0.77
PRKCH-202ENST00000536400 COL11A2P13942 1736 aaPredicted RBP10.26□□□□□ -0.77
PRKCH-202ENST00000536400 LTBP3Q9NS15 1303 aa10.26□□□□□ -0.77
PRKCH-202ENST00000536400 C21orf2O43822 256 aa10.25□□□□□ -0.77
PRKCH-202ENST00000536400 DDNO94850 711 aaPredicted RBP10.25□□□□□ -0.77
PRKCH-202ENST00000536400 LDHDQ86WU2 507 aa10.25□□□□□ -0.77
PRKCH-202ENST00000536400 SLC52A2Q9HAB3 445 aa10.25□□□□□ -0.77
PRKCH-202ENST00000536400 MRC1P22897 1456 aa10.24□□□□□ -0.77
PRKCH-202ENST00000536400 SLX4Q8IY92 1834 aa10.24□□□□□ -0.77
PRKCH-202ENST00000536400 TMEM88BA6NKF7 163 aa10.24□□□□□ -0.77
PRKCH-202ENST00000536400 ITGBL1O95965 494 aaPredicted RBP10.24□□□□□ -0.77
PRKCH-202ENST00000536400 LBX1P52954 281 aa10.24□□□□□ -0.77
PRKCH-202ENST00000536400 FAM161AQ3B820 660 aa10.24□□□□□ -0.77
PRKCH-202ENST00000536400 AKAP4Q5JQC9 854 aa10.24□□□□□ -0.77
PRKCH-202ENST00000536400 VSIG10Q8N0Z9 540 aa10.24□□□□□ -0.77
PRKCH-202ENST00000536400 ZNF622Q969S3 477 aaKnown RBP eCLIP10.24□□□□□ -0.77
PRKCH-202ENST00000536400 ABHD8Q96I13 439 aa10.24□□□□□ -0.77
PRKCH-202ENST00000536400 BRIP1Q9BX63 1249 aa10.24□□□□□ -0.77
PRKCH-202ENST00000536400 TAOK3Q9H2K8 898 aa10.24□□□□□ -0.77
PRKCH-202ENST00000536400 IQCA1LA6NCM1 817 aa10.23□□□□□ -0.77
PRKCH-202ENST00000536400 HSPA8P11142 646 aaKnown RBP10.23□□□□□ -0.77
PRKCH-202ENST00000536400 PDE6BP35913 854 aa10.23□□□□□ -0.77
PRKCH-202ENST00000536400 EIF5P55010 431 aaKnown RBP10.23□□□□□ -0.77
PRKCH-202ENST00000536400 SLC39A6Q13433 755 aa10.23□□□□□ -0.77
PRKCH-202ENST00000536400 SULT6B1Q6IMI4 303 aa10.23□□□□□ -0.77
PRKCH-202ENST00000536400 L3MBTL3Q96JM7 780 aaPredicted RBP10.23□□□□□ -0.77
PRKCH-202ENST00000536400 TAF1DQ9H5J8 278 aaPredicted RBP10.23□□□□□ -0.77
PRKCH-202ENST00000536400 LGR6Q9HBX8 967 aa10.23□□□□□ -0.77
PRKCH-202ENST00000536400 PCDH10Q9P2E7 1040 aa10.23□□□□□ -0.77
PRKCH-202ENST00000536400 ARFGEF2Q9Y6D5 1785 aa10.23□□□□□ -0.77
PRKCH-202ENST00000536400 CACNA1SQ13698 1873 aa10.23□□□□□ -0.77
PRKCH-202ENST00000536400 UBR2Q8IWV8 1755 aa10.22□□□□□ -0.77
PRKCH-202ENST00000536400 ADAMTSL1Q8N6G6 1762 aa10.22□□□□□ -0.77
PRKCH-202ENST00000536400 RASSF10A6NK89 507 aa10.22□□□□□ -0.77
PRKCH-202ENST00000536400 TBC1D9BQ66K14 1250 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms