RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 ZNF790Q6PG37 636 aa20.56■□□□□ 0.88
PAAF1-207ENST00000536003 NUDCQ9Y266 331 aa20.56■□□□□ 0.88
PAAF1-207ENST00000536003 PARP3Q9Y6F1 533 aa20.55■□□□□ 0.88
PAAF1-207ENST00000536003 ADCY9O60503 1353 aa20.55■□□□□ 0.88
PAAF1-207ENST00000536003 HEG1Q9ULI3 1381 aa20.55■□□□□ 0.88
PAAF1-207ENST00000536003 ARFGEF1Q9Y6D6 1849 aa20.54■□□□□ 0.88
PAAF1-207ENST00000536003 A0A0G2JLW4 131 aa20.54■□□□□ 0.88
PAAF1-207ENST00000536003 ATP10DQ9P241 1426 aa20.53■□□□□ 0.88
PAAF1-207ENST00000536003 KCNQ3O43525 872 aa20.53■□□□□ 0.88
PAAF1-207ENST00000536003 MCM10Q7L590 875 aa20.53■□□□□ 0.88
PAAF1-207ENST00000536003 BCORQ6W2J9 1755 aa20.52■□□□□ 0.88
PAAF1-207ENST00000536003 POLRMTO00411 1230 aaKnown RBP20.52■□□□□ 0.88
PAAF1-207ENST00000536003 FCHSD2O94868 740 aa20.52■□□□□ 0.88
PAAF1-207ENST00000536003 DPEP1P16444 411 aa20.52■□□□□ 0.88
PAAF1-207ENST00000536003 CANXP27824 592 aaKnown RBP20.52■□□□□ 0.88
PAAF1-207ENST00000536003 BCL2L12Q9HB09 334 aa20.52■□□□□ 0.88
PAAF1-207ENST00000536003 ZPR1O75312 459 aa20.51■□□□□ 0.87
PAAF1-207ENST00000536003 TGFB2P61812 414 aa20.51■□□□□ 0.87
PAAF1-207ENST00000536003 DLEC1Q9Y238 1755 aa20.51■□□□□ 0.87
PAAF1-207ENST00000536003 TM4SF1P30408 202 aa20.5■□□□□ 0.87
PAAF1-207ENST00000536003 DCTN1Q14203 1278 aa20.5■□□□□ 0.87
PAAF1-207ENST00000536003 NARFQ9UHQ1 456 aa20.5■□□□□ 0.87
PAAF1-207ENST00000536003 BTBD11A6QL63 1104 aa20.49■□□□□ 0.87
PAAF1-207ENST00000536003 KDM3BQ7LBC6 1761 aa20.49■□□□□ 0.87
PAAF1-207ENST00000536003 LAMB4A4D0S4 1761 aa20.49■□□□□ 0.87
PAAF1-207ENST00000536003 KCNA3P22001 575 aa20.49■□□□□ 0.87
PAAF1-207ENST00000536003 NFIXQ14938 502 aa20.49■□□□□ 0.87
PAAF1-207ENST00000536003 BCS1LQ9Y276 419 aa20.49■□□□□ 0.87
PAAF1-207ENST00000536003 CEP350Q5VT06 3117 aa20.48■□□□□ 0.87
PAAF1-207ENST00000536003 EIF5P55010 431 aaKnown RBP20.48■□□□□ 0.87
PAAF1-207ENST00000536003 FMNL2Q96PY5 1086 aa20.48■□□□□ 0.87
PAAF1-207ENST00000536003 ANKRD31Q8N7Z5 1873 aa20.48■□□□□ 0.87
PAAF1-207ENST00000536003 PRAMEF22A3QJZ6 481 aa20.47■□□□□ 0.87
PAAF1-207ENST00000536003 STARD3NLO95772 234 aa20.47■□□□□ 0.87
PAAF1-207ENST00000536003 CARMIL3Q8ND23 1372 aa20.47■□□□□ 0.87
PAAF1-207ENST00000536003 CHRNA5P30532 468 aa20.45■□□□□ 0.87
PAAF1-207ENST00000536003 RTF1Q92541 710 aaKnown RBP20.45■□□□□ 0.87
PAAF1-207ENST00000536003 ZNF330Q9Y3S2 320 aaPredicted RBP20.45■□□□□ 0.87
PAAF1-207ENST00000536003 COL11A2P13942 1736 aaPredicted RBP20.45■□□□□ 0.86
PAAF1-207ENST00000536003 A1BGP04217 495 aa20.45■□□□□ 0.86
PAAF1-207ENST00000536003 PLEKHF1Q96S99 279 aa20.45■□□□□ 0.86
PAAF1-207ENST00000536003 GIGYF1O75420 1035 aaPredicted RBP20.44■□□□□ 0.86
PAAF1-207ENST00000536003 PIP4K2AP48426 406 aaPredicted RBP20.44■□□□□ 0.86
PAAF1-207ENST00000536003 C1QTNF8P60827 252 aa20.43■□□□□ 0.86
PAAF1-207ENST00000536003 ZNF526Q8TF50 670 aaPredicted RBP20.43■□□□□ 0.86
PAAF1-207ENST00000536003 USP16Q9Y5T5 823 aa20.43■□□□□ 0.86
PAAF1-207ENST00000536003 TEX13AQ9BXU3 409 aaPredicted RBP20.42■□□□□ 0.86
PAAF1-207ENST00000536003 TBC1D2BQ9UPU7 963 aa20.42■□□□□ 0.86
PAAF1-207ENST00000536003 BICDL1Q6ZP65 573 aa20.42■□□□□ 0.86
PAAF1-207ENST00000536003 IL6STP40189 918 aaPredicted RBP20.41■□□□□ 0.86
PAAF1-207ENST00000536003 DDX10Q13206 875 aaKnown RBP20.41■□□□□ 0.86
PAAF1-207ENST00000536003 TBC1D9BQ66K14 1250 aa20.41■□□□□ 0.86
PAAF1-207ENST00000536003 SBF1O95248 1867 aa20.4■□□□□ 0.86
PAAF1-207ENST00000536003 HTATSF1O43719 755 aaKnown RBP20.4■□□□□ 0.86
PAAF1-207ENST00000536003 SERPINB2P05120 415 aa20.4■□□□□ 0.86
PAAF1-207ENST00000536003 THUMPD2Q9BTF0 503 aaKnown RBP20.4■□□□□ 0.86
PAAF1-207ENST00000536003 MIS18AQ9NYP9 233 aa20.4■□□□□ 0.86
PAAF1-207ENST00000536003 PIM2Q9P1W9 311 aa20.4■□□□□ 0.86
PAAF1-207ENST00000536003 A0A087WZG4 1122 aa20.39■□□□□ 0.86
PAAF1-207ENST00000536003 CACNA1SQ13698 1873 aa20.39■□□□□ 0.85
PAAF1-207ENST00000536003 ARHGAP27Q6ZUM4 889 aa20.38■□□□□ 0.85
PAAF1-207ENST00000536003 CAMTA2O94983 1202 aa20.38■□□□□ 0.85
PAAF1-207ENST00000536003 DALRD3Q5D0E6 543 aaKnown RBP20.38■□□□□ 0.85
PAAF1-207ENST00000536003 GPBP1L1Q9HC44 474 aaPredicted RBP20.38■□□□□ 0.85
PAAF1-207ENST00000536003 SNRPA1P09661 255 aaKnown RBP20.37■□□□□ 0.85
PAAF1-207ENST00000536003 RALBP1Q15311 655 aa20.37■□□□□ 0.85
PAAF1-207ENST00000536003 NFE2L2Q16236 605 aa20.37■□□□□ 0.85
PAAF1-207ENST00000536003 TAF7Q15545 349 aaPredicted RBP20.36■□□□□ 0.85
PAAF1-207ENST00000536003 NBPF26B4DH59 902 aa20.35■□□□□ 0.85
PAAF1-207ENST00000536003 NBPF10Q6P3W6 841 aaKnown RBP20.35■□□□□ 0.85
PAAF1-207ENST00000536003 DZIP3Q86Y13 1208 aaKnown RBP20.35■□□□□ 0.85
PAAF1-207ENST00000536003 CCDC24Q8N4L8 307 aa20.35■□□□□ 0.85
PAAF1-207ENST00000536003 NBPF15Q8N660 670 aa20.35■□□□□ 0.85
PAAF1-207ENST00000536003 MAPK8IP3Q9UPT6 1336 aa20.35■□□□□ 0.85
PAAF1-207ENST00000536003 NEFMP07197 916 aa20.35■□□□□ 0.85
PAAF1-207ENST00000536003 SENP3-EIF4A1A0A087X0R7 540 aa20.34■□□□□ 0.85
PAAF1-207ENST00000536003 PRR5LQ6MZQ0 368 aa20.34■□□□□ 0.85
PAAF1-207ENST00000536003 TIAM2Q8IVF5 1701 aa20.33■□□□□ 0.85
PAAF1-207ENST00000536003 MYBBP1AQ9BQG0 1328 aaKnown RBP20.33■□□□□ 0.85
PAAF1-207ENST00000536003 CCDC88AQ3V6T2 1871 aa20.33■□□□□ 0.84
PAAF1-207ENST00000536003 ARFGEF2Q9Y6D5 1785 aa20.32■□□□□ 0.84
PAAF1-207ENST00000536003 C2CD5Q86YS7 1000 aa20.31■□□□□ 0.84
PAAF1-207ENST00000536003 NUP98P52948 1817 aa20.31■□□□□ 0.84
PAAF1-207ENST00000536003 C9orf131Q5VYM1 1079 aa20.31■□□□□ 0.84
PAAF1-207ENST00000536003 NPM2Q86SE8 214 aaKnown RBP20.31■□□□□ 0.84
PAAF1-207ENST00000536003 RASSF7Q02833 373 aa20.3■□□□□ 0.84
PAAF1-207ENST00000536003 TNRC6CQ9HCJ0 1690 aaKnown RBP20.29■□□□□ 0.84
PAAF1-207ENST00000536003 KIF3CO14782 793 aa20.29■□□□□ 0.84
PAAF1-207ENST00000536003 EIF4A1P60842 406 aaKnown RBP20.29■□□□□ 0.84
PAAF1-207ENST00000536003 SLX4Q8IY92 1834 aa20.29■□□□□ 0.84
PAAF1-207ENST00000536003 FER1L6Q2WGJ9 1857 aa20.29■□□□□ 0.84
PAAF1-207ENST00000536003 CNBD1Q8NA66 436 aa20.28■□□□□ 0.84
PAAF1-207ENST00000536003 SETDB2Q96T68 719 aa20.28■□□□□ 0.84
PAAF1-207ENST00000536003 PRELPP51888 382 aa20.27■□□□□ 0.84
PAAF1-207ENST00000536003 CCDC146Q8IYE0 955 aa20.27■□□□□ 0.84
PAAF1-207ENST00000536003 PNISRQ8TF01 805 aaKnown RBP20.27■□□□□ 0.84
PAAF1-207ENST00000536003 RNF181Q9P0P0 153 aa20.27■□□□□ 0.84
PAAF1-207ENST00000536003 H0YIN7 160 aa20.27■□□□□ 0.83
PAAF1-207ENST00000536003 RIPK4P57078 832 aa20.27■□□□□ 0.83
PAAF1-207ENST00000536003 TTLL6Q8N841 843 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms