RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 ELL2O00472 640 aaPredicted RBP20.82■□□□□ 0.92
VAMP1-205ENST00000535927 EN1Q05925 392 aaPredicted RBP20.82■□□□□ 0.92
VAMP1-205ENST00000535927 CYP19A1P11511 503 aaPredicted RBP20.81■□□□□ 0.92
VAMP1-205ENST00000535927 RARSP54136 660 aaKnown RBP20.81■□□□□ 0.92
VAMP1-205ENST00000535927 DDX21Q9NR30 783 aaKnown RBP eCLIP20.81■□□□□ 0.92
VAMP1-205ENST00000535927 HYPKQ9NX55 129 aa20.81■□□□□ 0.92
VAMP1-205ENST00000535927 USP16Q9Y5T5 823 aa20.81■□□□□ 0.92
VAMP1-205ENST00000535927 TXNRD1Q16881 649 aa20.8■□□□□ 0.92
VAMP1-205ENST00000535927 KRT24Q2M2I5 525 aa20.8■□□□□ 0.92
VAMP1-205ENST00000535927 DNAJC10Q8IXB1 793 aa20.8■□□□□ 0.92
VAMP1-205ENST00000535927 SLC4A9Q96Q91 983 aa20.8■□□□□ 0.92
VAMP1-205ENST00000535927 CNTNAP4Q9C0A0 1308 aa20.79■□□□□ 0.92
VAMP1-205ENST00000535927 EIF2S2P20042 333 aaKnown RBP20.79■□□□□ 0.92
VAMP1-205ENST00000535927 C5P01031 1676 aa20.78■□□□□ 0.92
VAMP1-205ENST00000535927 IPO8O15397 1037 aaKnown RBP20.78■□□□□ 0.92
VAMP1-205ENST00000535927 R3HDM1Q15032 1099 aaKnown RBP20.78■□□□□ 0.92
VAMP1-205ENST00000535927 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.78■□□□□ 0.92
VAMP1-205ENST00000535927 ARHGAP45Q92619 1136 aa20.78■□□□□ 0.92
VAMP1-205ENST00000535927 CAMKK2Q96RR4 588 aa20.78■□□□□ 0.92
VAMP1-205ENST00000535927 KIF16BQ96L93 1317 aa20.78■□□□□ 0.92
VAMP1-205ENST00000535927 NPM2Q86SE8 214 aaKnown RBP20.77■□□□□ 0.92
VAMP1-205ENST00000535927 CCDC87Q9NVE4 849 aa20.77■□□□□ 0.92
VAMP1-205ENST00000535927 TJP1Q07157 1748 aa20.77■□□□□ 0.92
VAMP1-205ENST00000535927 TAF1LQ8IZX4 1826 aa20.76■□□□□ 0.91
VAMP1-205ENST00000535927 SLC4A2P04920 1241 aa20.76■□□□□ 0.91
VAMP1-205ENST00000535927 IL6STP40189 918 aaPredicted RBP20.76■□□□□ 0.91
VAMP1-205ENST00000535927 ITPK1Q13572 414 aa20.76■□□□□ 0.91
VAMP1-205ENST00000535927 SSH1Q8WYL5 1049 aa20.76■□□□□ 0.91
VAMP1-205ENST00000535927 SMC4Q9NTJ3 1288 aa20.76■□□□□ 0.91
VAMP1-205ENST00000535927 COL5A3P25940 1745 aaPredicted RBP20.75■□□□□ 0.91
VAMP1-205ENST00000535927 RGL2O15211 777 aa20.75■□□□□ 0.91
VAMP1-205ENST00000535927 MS4A1P11836 297 aa20.75■□□□□ 0.91
VAMP1-205ENST00000535927 PTPRCP08575 1304 aa20.75■□□□□ 0.91
VAMP1-205ENST00000535927 A0A087WZG4 1122 aa20.74■□□□□ 0.91
VAMP1-205ENST00000535927 PRAMEF22A3QJZ6 481 aa20.74■□□□□ 0.91
VAMP1-205ENST00000535927 CRKLP46109 303 aaKnown RBP20.74■□□□□ 0.91
VAMP1-205ENST00000535927 PROM2Q8N271 834 aa20.74■□□□□ 0.91
VAMP1-205ENST00000535927 MRPL50Q8N5N7 158 aaKnown RBP20.74■□□□□ 0.91
VAMP1-205ENST00000535927 RPS6KA4O75676 772 aa20.73■□□□□ 0.91
VAMP1-205ENST00000535927 DDX58O95786 925 aaKnown RBP20.73■□□□□ 0.91
VAMP1-205ENST00000535927 ADRA2BP18089 450 aa20.73■□□□□ 0.91
VAMP1-205ENST00000535927 PDIA6Q15084 440 aa20.73■□□□□ 0.91
VAMP1-205ENST00000535927 CHPF2Q9P2E5 772 aa20.73■□□□□ 0.91
VAMP1-205ENST00000535927 RREB1Q92766 1687 aa20.73■□□□□ 0.91
VAMP1-205ENST00000535927 A1BGP04217 495 aa20.72■□□□□ 0.91
VAMP1-205ENST00000535927 INTS5Q6P9B9 1019 aaKnown RBP20.72■□□□□ 0.91
VAMP1-205ENST00000535927 LINC00116Q8NCU8 138 aa20.72■□□□□ 0.91
VAMP1-205ENST00000535927 FLAD1Q8NFF5 587 aa20.72■□□□□ 0.91
VAMP1-205ENST00000535927 LRRC4BQ9NT99 713 aa20.72■□□□□ 0.91
VAMP1-205ENST00000535927 EIF5P55010 431 aaKnown RBP20.71■□□□□ 0.91
VAMP1-205ENST00000535927 EZH2Q15910 746 aaKnown RBP20.71■□□□□ 0.91
VAMP1-205ENST00000535927 MYH14Q7Z406 1995 aaKnown RBP20.7■□□□□ 0.9
VAMP1-205ENST00000535927 NBPF26B4DH59 902 aa20.7■□□□□ 0.9
VAMP1-205ENST00000535927 NBPF14Q5TI25 921 aa20.7■□□□□ 0.9
VAMP1-205ENST00000535927 NBPF10Q6P3W6 841 aaKnown RBP20.7■□□□□ 0.9
VAMP1-205ENST00000535927 NBPF15Q8N660 670 aa20.7■□□□□ 0.9
VAMP1-205ENST00000535927 API5Q9BZZ5 524 aaKnown RBP20.7■□□□□ 0.9
VAMP1-205ENST00000535927 RTCBQ9Y3I0 505 aaKnown RBP20.7■□□□□ 0.9
VAMP1-205ENST00000535927 C4BP0C0L5 1744 aa20.7■□□□□ 0.9
VAMP1-205ENST00000535927 AK7Q96M32 723 aa20.69■□□□□ 0.9
VAMP1-205ENST00000535927 SSFA2P28290 1259 aa20.68■□□□□ 0.9
VAMP1-205ENST00000535927 FLIIQ13045 1269 aa20.68■□□□□ 0.9
VAMP1-205ENST00000535927 ZKSCAN2Q63HK3 967 aa20.68■□□□□ 0.9
VAMP1-205ENST00000535927 LRP10Q7Z4F1 713 aa20.68■□□□□ 0.9
VAMP1-205ENST00000535927 NECTIN2Q92692 538 aa20.68■□□□□ 0.9
VAMP1-205ENST00000535927 RNF123Q5XPI4 1314 aa20.68■□□□□ 0.9
VAMP1-205ENST00000535927 ERVV-1B6SEH8 477 aa20.67■□□□□ 0.9
VAMP1-205ENST00000535927 BCAR3O75815 825 aa20.67■□□□□ 0.9
VAMP1-205ENST00000535927 CANXP27824 592 aaKnown RBP20.67■□□□□ 0.9
VAMP1-205ENST00000535927 ZBTB1Q9Y2K1 713 aa20.67■□□□□ 0.9
VAMP1-205ENST00000535927 PDE3AQ14432 1141 aa20.66■□□□□ 0.9
VAMP1-205ENST00000535927 TRAPPC3LQ5T215 181 aa20.66■□□□□ 0.9
VAMP1-205ENST00000535927 ATF7IPQ6VMQ6 1270 aa20.66■□□□□ 0.9
VAMP1-205ENST00000535927 ANKRD13DQ6ZTN6 518 aa20.66■□□□□ 0.9
VAMP1-205ENST00000535927 PLBD2Q8NHP8 589 aa20.66■□□□□ 0.9
VAMP1-205ENST00000535927 NOB1Q9ULX3 412 aaKnown RBP20.66■□□□□ 0.9
VAMP1-205ENST00000535927 GNPATO15228 680 aa20.65■□□□□ 0.9
VAMP1-205ENST00000535927 MYL6BP14649 208 aa20.65■□□□□ 0.9
VAMP1-205ENST00000535927 KSR2Q6VAB6 950 aa20.65■□□□□ 0.9
VAMP1-205ENST00000535927 KIF6Q6ZMV9 814 aa20.65■□□□□ 0.9
VAMP1-205ENST00000535927 COPS6Q7L5N1 327 aa20.65■□□□□ 0.9
VAMP1-205ENST00000535927 AKT1S1Q96B36 256 aa20.65■□□□□ 0.9
VAMP1-205ENST00000535927 FKBP5Q13451 457 aaPredicted RBP20.64■□□□□ 0.89
VAMP1-205ENST00000535927 PROSER3Q2NL68 480 aa20.64■□□□□ 0.89
VAMP1-205ENST00000535927 CLEC4GQ6UXB4 293 aa20.64■□□□□ 0.89
VAMP1-205ENST00000535927 XAGE3Q8WTP9 111 aa20.64■□□□□ 0.89
VAMP1-205ENST00000535927 STK32BQ9NY57 414 aa20.64■□□□□ 0.89
VAMP1-205ENST00000535927 IBTKQ9P2D0 1353 aaPredicted RBP20.63■□□□□ 0.89
VAMP1-205ENST00000535927 KCNQ4P56696 695 aa20.63■□□□□ 0.89
VAMP1-205ENST00000535927 HSP90AB3PQ58FF7 597 aa20.63■□□□□ 0.89
VAMP1-205ENST00000535927 BCL2L13Q9BXK5 485 aa20.63■□□□□ 0.89
VAMP1-205ENST00000535927 PHAXQ9H814 394 aaKnown RBP20.63■□□□□ 0.89
VAMP1-205ENST00000535927 COL15A1P39059 1388 aa20.62■□□□□ 0.89
VAMP1-205ENST00000535927 TCERG1O14776 1098 aaKnown RBP20.62■□□□□ 0.89
VAMP1-205ENST00000535927 RRP1P56182 461 aaKnown RBP20.62■□□□□ 0.89
VAMP1-205ENST00000535927 SLC15A2Q16348 729 aa20.62■□□□□ 0.89
VAMP1-205ENST00000535927 CHMP4BQ9H444 224 aaKnown RBP20.62■□□□□ 0.89
VAMP1-205ENST00000535927 TFCP2L1Q9NZI6 479 aa20.62■□□□□ 0.89
VAMP1-205ENST00000535927 ZNF652Q9Y2D9 606 aa20.62■□□□□ 0.89
VAMP1-205ENST00000535927 UBR3Q6ZT12 1888 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms