RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 VSIG10Q8N0Z9 540 aa27.74■■■□□ 2.03
LTBR-205ENST00000535739 PIM2Q9P1W9 311 aa27.74■■■□□ 2.03
LTBR-205ENST00000535739 COL15A1P39059 1388 aa27.73■■■□□ 2.03
LTBR-205ENST00000535739 NARFQ9UHQ1 456 aa27.73■■■□□ 2.03
LTBR-205ENST00000535739 CHRNA5P30532 468 aa27.72■■■□□ 2.03
LTBR-205ENST00000535739 IL17REQ8NFR9 667 aa27.72■■■□□ 2.03
LTBR-205ENST00000535739 SIPA1L3O60292 1781 aaPredicted RBP27.71■■■□□ 2.03
LTBR-205ENST00000535739 KIF3CO14782 793 aa27.71■■■□□ 2.03
LTBR-205ENST00000535739 TTC5Q8N0Z6 440 aa27.71■■■□□ 2.03
LTBR-205ENST00000535739 GAS2L2Q8NHY3 880 aa27.71■■■□□ 2.03
LTBR-205ENST00000535739 GNAT3A8MTJ3 354 aa27.7■■■□□ 2.02
LTBR-205ENST00000535739 DALRD3Q5D0E6 543 aaKnown RBP27.7■■■□□ 2.02
LTBR-205ENST00000535739 CANXP27824 592 aaKnown RBP27.69■■■□□ 2.02
LTBR-205ENST00000535739 TEFQ10587 303 aa27.69■■■□□ 2.02
LTBR-205ENST00000535739 NFIXQ14938 502 aa27.69■■■□□ 2.02
LTBR-205ENST00000535739 BCL2L12Q9HB09 334 aa27.69■■■□□ 2.02
LTBR-205ENST00000535739 ZNF496Q96IT1 587 aaPredicted RBP27.67■■■□□ 2.02
LTBR-205ENST00000535739 NRXN2Q9P2S2 1712 aa27.67■■■□□ 2.02
LTBR-205ENST00000535739 HSPA6P17066 643 aa27.66■■■□□ 2.02
LTBR-205ENST00000535739 ZNF790Q6PG37 636 aa27.66■■■□□ 2.02
LTBR-205ENST00000535739 PHACTR3Q96KR7 559 aa27.66■■■□□ 2.02
LTBR-205ENST00000535739 STARD3NLO95772 234 aa27.65■■■□□ 2.02
LTBR-205ENST00000535739 C9orf131Q5VYM1 1079 aa27.65■■■□□ 2.02
LTBR-205ENST00000535739 CFAP53Q96M91 514 aa27.65■■■□□ 2.02
LTBR-205ENST00000535739 SBF1O95248 1867 aa27.64■■■□□ 2.02
LTBR-205ENST00000535739 HEG1Q9ULI3 1381 aa27.64■■■□□ 2.02
LTBR-205ENST00000535739 PRKAR2BP31323 418 aa27.64■■■□□ 2.02
LTBR-205ENST00000535739 EIF5P55010 431 aaKnown RBP27.64■■■□□ 2.02
LTBR-205ENST00000535739 SERPINB2P05120 415 aa27.63■■■□□ 2.01
LTBR-205ENST00000535739 RSPH6AQ9H0K4 717 aa27.63■■■□□ 2.01
LTBR-205ENST00000535739 NMRK2Q9NPI5 230 aa27.61■■■□□ 2.01
LTBR-205ENST00000535739 CEMIPQ8WUJ3 1361 aa27.6■■■□□ 2.01
LTBR-205ENST00000535739 BICDL1Q6ZP65 573 aa27.6■■■□□ 2.01
LTBR-205ENST00000535739 TEX13AQ9BXU3 409 aaPredicted RBP27.6■■■□□ 2.01
LTBR-205ENST00000535739 DLEC1Q9Y238 1755 aa27.6■■■□□ 2.01
LTBR-205ENST00000535739 A0A087WZG4 1122 aa27.59■■■□□ 2.01
LTBR-205ENST00000535739 PPP2R1AP30153 589 aa27.59■■■□□ 2.01
LTBR-205ENST00000535739 KCNQ3O43525 872 aa27.58■■■□□ 2.01
LTBR-205ENST00000535739 FMNL2Q96PY5 1086 aa27.58■■■□□ 2.01
LTBR-205ENST00000535739 RNF181Q9P0P0 153 aa27.58■■■□□ 2.01
LTBR-205ENST00000535739 NUDCQ9Y266 331 aa27.58■■■□□ 2.01
LTBR-205ENST00000535739 ZNF330Q9Y3S2 320 aaPredicted RBP27.58■■■□□ 2.01
LTBR-205ENST00000535739 BTBD11A6QL63 1104 aa27.57■■■□□ 2
LTBR-205ENST00000535739 CARMIL3Q8ND23 1372 aa27.57■■■□□ 2
LTBR-205ENST00000535739 SCN7AQ01118 1682 aa27.56■■■□□ 2
LTBR-205ENST00000535739 A1BGP04217 495 aa27.56■■■□□ 2
LTBR-205ENST00000535739 U2AF1L5P0DN76 240 aaPredicted RBP27.56■■■□□ 2
LTBR-205ENST00000535739 U2AF1Q01081 240 aaKnown RBP eCLIP27.56■■■□□ 2
LTBR-205ENST00000535739 TBC1D9BQ66K14 1250 aa27.56■■■□□ 2
LTBR-205ENST00000535739 TBC1D2BQ9UPU7 963 aa27.56■■■□□ 2
LTBR-205ENST00000535739 TOMM70O94826 608 aa27.55■■■□□ 2
LTBR-205ENST00000535739 ANKRD31Q8N7Z5 1873 aa27.55■■■□□ 2
LTBR-205ENST00000535739 IL6STP40189 918 aaPredicted RBP27.54■■■□□ 2
LTBR-205ENST00000535739 C2CD5Q86YS7 1000 aa27.54■■■□□ 2
LTBR-205ENST00000535739 CCDC88AQ3V6T2 1871 aa27.53■■■□□ 2
LTBR-205ENST00000535739 RASSF7Q02833 373 aa27.53■■■□□ 2
LTBR-205ENST00000535739 MCM10Q7L590 875 aa27.52■■■□□ 2
LTBR-205ENST00000535739 H0YIN7 160 aa27.51■■□□□ 1.99
LTBR-205ENST00000535739 TTLL6Q8N841 843 aa27.51■■□□□ 1.99
LTBR-205ENST00000535739 RTF1Q92541 710 aaKnown RBP27.5■■□□□ 1.99
LTBR-205ENST00000535739 USP16Q9Y5T5 823 aa27.5■■□□□ 1.99
LTBR-205ENST00000535739 NPM2Q86SE8 214 aaKnown RBP27.49■■□□□ 1.99
LTBR-205ENST00000535739 CCDC24Q8N4L8 307 aa27.49■■□□□ 1.99
LTBR-205ENST00000535739 KDM2BQ8NHM5 1336 aa27.48■■□□□ 1.99
LTBR-205ENST00000535739 PRAMEF22A3QJZ6 481 aa27.48■■□□□ 1.99
LTBR-205ENST00000535739 CAMTA2O94983 1202 aa27.48■■□□□ 1.99
LTBR-205ENST00000535739 PIP4K2AP48426 406 aaPredicted RBP27.48■■□□□ 1.99
LTBR-205ENST00000535739 DCTN1Q14203 1278 aa27.48■■□□□ 1.99
LTBR-205ENST00000535739 BCORQ6W2J9 1755 aa27.48■■□□□ 1.99
LTBR-205ENST00000535739 PRR5LQ6MZQ0 368 aa27.47■■□□□ 1.99
LTBR-205ENST00000535739 COL11A2P13942 1736 aaPredicted RBP27.47■■□□□ 1.99
LTBR-205ENST00000535739 PRELPP51888 382 aa27.46■■□□□ 1.99
LTBR-205ENST00000535739 C16orf71Q8IYS4 520 aaPredicted RBP27.46■■□□□ 1.99
LTBR-205ENST00000535739 RRAGCQ9HB90 399 aa27.46■■□□□ 1.99
LTBR-205ENST00000535739 APLP1P51693 650 aa27.45■■□□□ 1.98
LTBR-205ENST00000535739 DZIP3Q86Y13 1208 aaKnown RBP27.45■■□□□ 1.98
LTBR-205ENST00000535739 RBM46Q8TBY0 533 aaKnown RBP27.45■■□□□ 1.98
LTBR-205ENST00000535739 ZNF622Q969S3 477 aaKnown RBP eCLIP27.45■■□□□ 1.98
LTBR-205ENST00000535739 SETDB2Q96T68 719 aa27.45■■□□□ 1.98
LTBR-205ENST00000535739 BRIP1Q9BX63 1249 aa27.45■■□□□ 1.98
LTBR-205ENST00000535739 TNRC6CQ9HCJ0 1690 aaKnown RBP27.45■■□□□ 1.98
LTBR-205ENST00000535739 LMNB1P20700 586 aa27.44■■□□□ 1.98
LTBR-205ENST00000535739 PDE6BP35913 854 aa27.44■■□□□ 1.98
LTBR-205ENST00000535739 DLG5Q8TDM6 1919 aa27.43■■□□□ 1.98
LTBR-205ENST00000535739 SNRPA1P09661 255 aaKnown RBP27.43■■□□□ 1.98
LTBR-205ENST00000535739 HTATSF1O43719 755 aaKnown RBP27.42■■□□□ 1.98
LTBR-205ENST00000535739 CACNA1SQ13698 1873 aa27.42■■□□□ 1.98
LTBR-205ENST00000535739 TIAM2Q8IVF5 1701 aa27.41■■□□□ 1.98
LTBR-205ENST00000535739 NFKBIEO00221 500 aa27.41■■□□□ 1.98
LTBR-205ENST00000535739 CNBD1Q8NA66 436 aa27.41■■□□□ 1.98
LTBR-205ENST00000535739 ZNF219Q9P2Y4 722 aaPredicted RBP27.41■■□□□ 1.98
LTBR-205ENST00000535739 PDZRN3Q9UPQ7 1066 aa27.41■■□□□ 1.98
LTBR-205ENST00000535739 ZC3H4Q9UPT8 1303 aaKnown RBP27.41■■□□□ 1.98
LTBR-205ENST00000535739 NPHP1O15259 732 aa27.4■■□□□ 1.98
LTBR-205ENST00000535739 FER1L6Q2WGJ9 1857 aa27.39■■□□□ 1.98
LTBR-205ENST00000535739 SLX4Q8IY92 1834 aa27.39■■□□□ 1.97
LTBR-205ENST00000535739 WDR90Q96KV7 1748 aa27.38■■□□□ 1.97
LTBR-205ENST00000535739 C21orf2O43822 256 aa27.38■■□□□ 1.97
LTBR-205ENST00000535739 TAF7Q15545 349 aaPredicted RBP27.38■■□□□ 1.97
LTBR-205ENST00000535739 MIS18AQ9NYP9 233 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms