RNA–Protein interactions for RNA: ENST00000535604.5

PAAF1-205, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5 BASIC

Gene PAAF1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-205ENST00000535604 TJP1Q07157 1748 aa22.02■■□□□ 1.12
PAAF1-205ENST00000535604 CICQ96RK0 1608 aaPredicted RBP22.01■■□□□ 1.11
PAAF1-205ENST00000535604 CANXP27824 592 aaKnown RBP22.01■■□□□ 1.11
PAAF1-205ENST00000535604 RIPK4P57078 832 aa22.01■■□□□ 1.11
PAAF1-205ENST00000535604 USP42Q9H9J4 1324 aaKnown RBP22.01■■□□□ 1.11
PAAF1-205ENST00000535604 ZPR1O75312 459 aa22■■□□□ 1.11
PAAF1-205ENST00000535604 TMPOP42166 694 aaKnown RBP22■■□□□ 1.11
PAAF1-205ENST00000535604 EIF5P55010 431 aaKnown RBP22■■□□□ 1.11
PAAF1-205ENST00000535604 FKBP8Q14318 412 aa22■■□□□ 1.11
PAAF1-205ENST00000535604 THUMPD2Q9BTF0 503 aaKnown RBP22■■□□□ 1.11
PAAF1-205ENST00000535604 USP16Q9Y5T5 823 aa22■■□□□ 1.11
PAAF1-205ENST00000535604 SNRPA1P09661 255 aaKnown RBP21.99■■□□□ 1.11
PAAF1-205ENST00000535604 CCDC146Q8IYE0 955 aa21.99■■□□□ 1.11
PAAF1-205ENST00000535604 SIPA1L3O60292 1781 aaPredicted RBP21.99■■□□□ 1.11
PAAF1-205ENST00000535604 A1BGP04217 495 aa21.98■■□□□ 1.11
PAAF1-205ENST00000535604 GPR162Q16538 588 aa21.98■■□□□ 1.11
PAAF1-205ENST00000535604 PNISRQ8TF01 805 aaKnown RBP21.98■■□□□ 1.11
PAAF1-205ENST00000535604 NARFQ9UHQ1 456 aa21.98■■□□□ 1.11
PAAF1-205ENST00000535604 UBR2Q8IWV8 1755 aa21.98■■□□□ 1.11
PAAF1-205ENST00000535604 PRAMEF22A3QJZ6 481 aa21.98■■□□□ 1.11
PAAF1-205ENST00000535604 USPL1Q5W0Q7 1092 aa21.98■■□□□ 1.11
PAAF1-205ENST00000535604 RUNDC1Q96C34 613 aa21.98■■□□□ 1.11
PAAF1-205ENST00000535604 TM4SF1P30408 202 aa21.96■■□□□ 1.11
PAAF1-205ENST00000535604 IL6STP40189 918 aaPredicted RBP21.96■■□□□ 1.11
PAAF1-205ENST00000535604 PARP3Q9Y6F1 533 aa21.96■■□□□ 1.11
PAAF1-205ENST00000535604 COL15A1P39059 1388 aa21.96■■□□□ 1.11
PAAF1-205ENST00000535604 NEUROD2Q15784 382 aa21.95■■□□□ 1.1
PAAF1-205ENST00000535604 RRP7AQ9Y3A4 280 aaKnown RBP21.95■■□□□ 1.1
PAAF1-205ENST00000535604 A0A087WZG4 1122 aa21.94■■□□□ 1.1
PAAF1-205ENST00000535604 BCL2L12Q9HB09 334 aa21.94■■□□□ 1.1
PAAF1-205ENST00000535604 EIF4A1P60842 406 aaKnown RBP21.93■■□□□ 1.1
PAAF1-205ENST00000535604 LMOD3Q0VAK6 560 aa21.93■■□□□ 1.1
PAAF1-205ENST00000535604 PELP1Q8IZL8 1130 aaKnown RBP21.93■■□□□ 1.1
PAAF1-205ENST00000535604 CCDC184Q52MB2 194 aa21.92■■□□□ 1.1
PAAF1-205ENST00000535604 GIGYF1O75420 1035 aaPredicted RBP21.91■■□□□ 1.1
PAAF1-205ENST00000535604 DDR1Q08345 913 aa21.91■■□□□ 1.1
PAAF1-205ENST00000535604 YY1P25490 414 aa21.91■■□□□ 1.1
PAAF1-205ENST00000535604 NPM2Q86SE8 214 aaKnown RBP21.91■■□□□ 1.1
PAAF1-205ENST00000535604 TRIM35Q9UPQ4 493 aa21.91■■□□□ 1.1
PAAF1-205ENST00000535604 TBC1D2BQ9UPU7 963 aa21.91■■□□□ 1.1
PAAF1-205ENST00000535604 ZNF330Q9Y3S2 320 aaPredicted RBP21.91■■□□□ 1.1
PAAF1-205ENST00000535604 POLRMTO00411 1230 aaKnown RBP21.9■■□□□ 1.1
PAAF1-205ENST00000535604 YBX3P16989 372 aaKnown RBP eCLIP21.9■■□□□ 1.12e-8■□□□□ 8.8
PAAF1-205ENST00000535604 TGFB2P61812 414 aa21.9■■□□□ 1.1
PAAF1-205ENST00000535604 BABAM1Q9NWV8 329 aa21.9■■□□□ 1.1
PAAF1-205ENST00000535604 ANP32CO43423 234 aa21.89■■□□□ 1.1
PAAF1-205ENST00000535604 PIP4K2AP48426 406 aaPredicted RBP21.89■■□□□ 1.1
PAAF1-205ENST00000535604 NFIXQ14938 502 aa21.89■■□□□ 1.1
PAAF1-205ENST00000535604 DLG5Q8TDM6 1919 aa21.89■■□□□ 1.09
PAAF1-205ENST00000535604 C4AP0C0L4 1744 aa21.89■■□□□ 1.09
PAAF1-205ENST00000535604 TSPYL4Q9UJ04 414 aa21.88■■□□□ 1.09
PAAF1-205ENST00000535604 NBPF26B4DH59 902 aa21.88■■□□□ 1.09
PAAF1-205ENST00000535604 GRIN3BO60391 1043 aa21.88■■□□□ 1.09
PAAF1-205ENST00000535604 NBPF10Q6P3W6 841 aaKnown RBP21.88■■□□□ 1.09
PAAF1-205ENST00000535604 NBPF15Q8N660 670 aa21.88■■□□□ 1.09
PAAF1-205ENST00000535604 A0A0G2JLW4 131 aa21.86■■□□□ 1.09
PAAF1-205ENST00000535604 APAF1O14727 1248 aa21.86■■□□□ 1.09
PAAF1-205ENST00000535604 CAMTA2O94983 1202 aa21.85■■□□□ 1.09
PAAF1-205ENST00000535604 DZIP3Q86Y13 1208 aaKnown RBP21.85■■□□□ 1.09
PAAF1-205ENST00000535604 CHL1O00533 1208 aa21.85■■□□□ 1.09
PAAF1-205ENST00000535604 C10orf71Q711Q0 1435 aa21.84■■□□□ 1.09
PAAF1-205ENST00000535604 SERPINB2P05120 415 aa21.84■■□□□ 1.09
PAAF1-205ENST00000535604 TBC1D9BQ66K14 1250 aa21.84■■□□□ 1.09
PAAF1-205ENST00000535604 WWC3Q9ULE0 1092 aa21.84■■□□□ 1.09
PAAF1-205ENST00000535604 DPEP1P16444 411 aa21.83■■□□□ 1.09
PAAF1-205ENST00000535604 BICDL1Q6ZP65 573 aa21.83■■□□□ 1.09
PAAF1-205ENST00000535604 KCNA3P22001 575 aa21.82■■□□□ 1.08
PAAF1-205ENST00000535604 CLEC4GQ6UXB4 293 aa21.82■■□□□ 1.08
PAAF1-205ENST00000535604 PXDNLA1KZ92 1463 aa21.81■■□□□ 1.08
PAAF1-205ENST00000535604 MRS2Q9HD23 443 aa21.81■■□□□ 1.08
PAAF1-205ENST00000535604 LAS1LQ9Y4W2 734 aaKnown RBP21.8■■□□□ 1.08
PAAF1-205ENST00000535604 SETDB2Q96T68 719 aa21.79■■□□□ 1.08
PAAF1-205ENST00000535604 CFAP44Q96MT7 982 aa21.79■■□□□ 1.08
PAAF1-205ENST00000535604 KDM3BQ7LBC6 1761 aa21.78■■□□□ 1.08
PAAF1-205ENST00000535604 RGL2O15211 777 aa21.77■■□□□ 1.08
PAAF1-205ENST00000535604 EIF2S2P20042 333 aaKnown RBP21.77■■□□□ 1.08
PAAF1-205ENST00000535604 NGEFQ8N5V2 710 aa21.77■■□□□ 1.08
PAAF1-205ENST00000535604 PIM2Q9P1W9 311 aa21.77■■□□□ 1.08
PAAF1-205ENST00000535604 BCS1LQ9Y276 419 aa21.77■■□□□ 1.08
PAAF1-205ENST00000535604 MYL6BP14649 208 aa21.76■■□□□ 1.07
PAAF1-205ENST00000535604 CHRNA5P30532 468 aa21.76■■□□□ 1.07
PAAF1-205ENST00000535604 ZNF652Q9Y2D9 606 aa21.76■■□□□ 1.07
PAAF1-205ENST00000535604 KIF13BQ9NQT8 1826 aa21.76■■□□□ 1.07
PAAF1-205ENST00000535604 ERBB4Q15303 1308 aa21.75■■□□□ 1.07
PAAF1-205ENST00000535604 ZNF853P0CG23 659 aa21.75■■□□□ 1.07
PAAF1-205ENST00000535604 PDIA6Q15084 440 aa21.75■■□□□ 1.07
PAAF1-205ENST00000535604 HLFQ16534 295 aa21.75■■□□□ 1.07
PAAF1-205ENST00000535604 KRT24Q2M2I5 525 aa21.75■■□□□ 1.07
PAAF1-205ENST00000535604 PRR5LQ6MZQ0 368 aa21.74■■□□□ 1.07
PAAF1-205ENST00000535604 TTLL7Q6ZT98 887 aa21.74■■□□□ 1.07
PAAF1-205ENST00000535604 CARMIL3Q8ND23 1372 aa21.74■■□□□ 1.07
PAAF1-205ENST00000535604 ERVV-1B6SEH8 477 aa21.73■■□□□ 1.07
PAAF1-205ENST00000535604 CALD1Q05682 793 aaKnown RBP21.73■■□□□ 1.07
PAAF1-205ENST00000535604 LRP10Q7Z4F1 713 aa21.73■■□□□ 1.07
PAAF1-205ENST00000535604 ZNF784Q8NCA9 323 aaPredicted RBP21.72■■□□□ 1.07
PAAF1-205ENST00000535604 BRIP1Q9BX63 1249 aa21.72■■□□□ 1.07
PAAF1-205ENST00000535604 MBIPQ9NS73 344 aa21.72■■□□□ 1.07
PAAF1-205ENST00000535604 DALRD3Q5D0E6 543 aaKnown RBP21.72■■□□□ 1.07
PAAF1-205ENST00000535604 CCDC24Q8N4L8 307 aa21.72■■□□□ 1.07
PAAF1-205ENST00000535604 IFT57Q9NWB7 429 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms