RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 ZNF790Q6PG37 636 aa12.53□□□□□ -0.4
CDCA3-204ENST00000535406 MCM10Q7L590 875 aa12.53□□□□□ -0.4
CDCA3-204ENST00000535406 PNNQ9H307 717 aaKnown RBP12.53□□□□□ -0.4
CDCA3-204ENST00000535406 MAPK8IP3Q9UPT6 1336 aa12.53□□□□□ -0.4
CDCA3-204ENST00000535406 HEG1Q9ULI3 1381 aa12.53□□□□□ -0.4
CDCA3-204ENST00000535406 BTBD11A6QL63 1104 aa12.52□□□□□ -0.41
CDCA3-204ENST00000535406 MMP10P09238 476 aa12.52□□□□□ -0.41
CDCA3-204ENST00000535406 CYP19A1P11511 503 aaPredicted RBP12.52□□□□□ -0.41
CDCA3-204ENST00000535406 NLGN1Q8N2Q7 840 aa12.52□□□□□ -0.41
CDCA3-204ENST00000535406 ZNF496Q96IT1 587 aaPredicted RBP12.52□□□□□ -0.41
CDCA3-204ENST00000535406 CD2APQ9Y5K6 639 aa12.52□□□□□ -0.41
CDCA3-204ENST00000535406 COL15A1P39059 1388 aa12.51□□□□□ -0.41
CDCA3-204ENST00000535406 SOS1Q07889 1333 aaPredicted RBP12.51□□□□□ -0.41
CDCA3-204ENST00000535406 USP42Q9H9J4 1324 aaKnown RBP12.51□□□□□ -0.41
CDCA3-204ENST00000535406 HTATSF1O43719 755 aaKnown RBP12.51□□□□□ -0.41
CDCA3-204ENST00000535406 GYS1P13807 737 aa12.51□□□□□ -0.41
CDCA3-204ENST00000535406 DCTN1Q14203 1278 aa12.51□□□□□ -0.41
CDCA3-204ENST00000535406 GPR162Q16538 588 aa12.51□□□□□ -0.41
CDCA3-204ENST00000535406 PELP1Q8IZL8 1130 aaKnown RBP12.51□□□□□ -0.41
CDCA3-204ENST00000535406 FMNL2Q96PY5 1086 aa12.51□□□□□ -0.41
CDCA3-204ENST00000535406 PLEKHF1Q96S99 279 aa12.51□□□□□ -0.41
CDCA3-204ENST00000535406 ZBTB1Q9Y2K1 713 aa12.51□□□□□ -0.41
CDCA3-204ENST00000535406 STARD3NLO95772 234 aa12.5□□□□□ -0.41
CDCA3-204ENST00000535406 YY1P25490 414 aa12.5□□□□□ -0.41
CDCA3-204ENST00000535406 SRP68Q9UHB9 627 aaKnown RBP12.5□□□□□ -0.41
CDCA3-204ENST00000535406 KIF13BQ9NQT8 1826 aa12.49□□□□□ -0.41
CDCA3-204ENST00000535406 ZPR1O75312 459 aa12.49□□□□□ -0.41
CDCA3-204ENST00000535406 NFE2L2Q16236 605 aa12.49□□□□□ -0.41
CDCA3-204ENST00000535406 TEX13AQ9BXU3 409 aaPredicted RBP12.49□□□□□ -0.41
CDCA3-204ENST00000535406 PRKRIP1Q9H875 184 aaPredicted RBP12.49□□□□□ -0.41
CDCA3-204ENST00000535406 CHD4Q14839 1912 aa12.49□□□□□ -0.41
CDCA3-204ENST00000535406 C10orf71Q711Q0 1435 aa12.48□□□□□ -0.41
CDCA3-204ENST00000535406 KCNQ3O43525 872 aa12.48□□□□□ -0.41
CDCA3-204ENST00000535406 CANXP27824 592 aaKnown RBP12.48□□□□□ -0.41
CDCA3-204ENST00000535406 PARP3Q9Y6F1 533 aa12.48□□□□□ -0.41
CDCA3-204ENST00000535406 KDM3BQ7LBC6 1761 aa12.48□□□□□ -0.41
CDCA3-204ENST00000535406 SCN7AQ01118 1682 aa12.47□□□□□ -0.41
CDCA3-204ENST00000535406 WDR43Q15061 677 aaKnown RBP eCLIP12.47□□□□□ -0.41
CDCA3-204ENST00000535406 LAMB4A4D0S4 1761 aa12.46□□□□□ -0.41
CDCA3-204ENST00000535406 TAF7Q15545 349 aaPredicted RBP12.46□□□□□ -0.41
CDCA3-204ENST00000535406 USPL1Q5W0Q7 1092 aa12.46□□□□□ -0.41
CDCA3-204ENST00000535406 NARFQ9UHQ1 456 aa12.46□□□□□ -0.41
CDCA3-204ENST00000535406 ZNF330Q9Y3S2 320 aaPredicted RBP12.46□□□□□ -0.41
CDCA3-204ENST00000535406 KIAA1551Q9HCM1 1747 aa12.46□□□□□ -0.41
CDCA3-204ENST00000535406 PXDNLA1KZ92 1463 aa12.45□□□□□ -0.42
CDCA3-204ENST00000535406 YBX3P16989 372 aaKnown RBP eCLIP12.45□□□□□ -0.42
CDCA3-204ENST00000535406 VASPP50552 380 aaPredicted RBP12.45□□□□□ -0.42
CDCA3-204ENST00000535406 EIF5P55010 431 aaKnown RBP12.45□□□□□ -0.42
CDCA3-204ENST00000535406 PNISRQ8TF01 805 aaKnown RBP12.45□□□□□ -0.42
CDCA3-204ENST00000535406 A0A087WZG4 1122 aa12.44□□□□□ -0.42
CDCA3-204ENST00000535406 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
CDCA3-204ENST00000535406 SNRPA1P09661 255 aaKnown RBP12.44□□□□□ -0.42
CDCA3-204ENST00000535406 IL6STP40189 918 aaPredicted RBP12.44□□□□□ -0.42
CDCA3-204ENST00000535406 DDR1Q08345 913 aa12.44□□□□□ -0.42
CDCA3-204ENST00000535406 LMOD3Q0VAK6 560 aa12.44□□□□□ -0.42
CDCA3-204ENST00000535406 NPM2Q86SE8 214 aaKnown RBP12.44□□□□□ -0.42
CDCA3-204ENST00000535406 CCDC146Q8IYE0 955 aa12.44□□□□□ -0.42
CDCA3-204ENST00000535406 THUMPD2Q9BTF0 503 aaKnown RBP12.44□□□□□ -0.42
CDCA3-204ENST00000535406 N4BP2Q86UW6 1770 aaPredicted RBP12.44□□□□□ -0.42
CDCA3-204ENST00000535406 BCORQ6W2J9 1755 aa12.43□□□□□ -0.42
CDCA3-204ENST00000535406 PRAMEF22A3QJZ6 481 aa12.43□□□□□ -0.42
CDCA3-204ENST00000535406 POLRMTO00411 1230 aaKnown RBP12.43□□□□□ -0.42
CDCA3-204ENST00000535406 RIPK4P57078 832 aa12.43□□□□□ -0.42
CDCA3-204ENST00000535406 MIS18AQ9NYP9 233 aa12.43□□□□□ -0.42
CDCA3-204ENST00000535406 WWC3Q9ULE0 1092 aa12.43□□□□□ -0.42
CDCA3-204ENST00000535406 AFDNP55196 1824 aaKnown RBP12.42□□□□□ -0.42
CDCA3-204ENST00000535406 ZNF316A6NFI3 1004 aaPredicted RBP12.42□□□□□ -0.42
CDCA3-204ENST00000535406 A1BGP04217 495 aa12.42□□□□□ -0.42
CDCA3-204ENST00000535406 TMPOP42166 694 aaKnown RBP12.42□□□□□ -0.42
CDCA3-204ENST00000535406 TGFB2P61812 414 aa12.42□□□□□ -0.42
CDCA3-204ENST00000535406 USP16Q9Y5T5 823 aa12.42□□□□□ -0.42
CDCA3-204ENST00000535406 NRXN2Q9P2S2 1712 aa12.42□□□□□ -0.42
CDCA3-204ENST00000535406 TM4SF1P30408 202 aa12.41□□□□□ -0.42
CDCA3-204ENST00000535406 NFIXQ14938 502 aa12.41□□□□□ -0.42
CDCA3-204ENST00000535406 RUNDC1Q96C34 613 aa12.41□□□□□ -0.42
CDCA3-204ENST00000535406 BCL2L12Q9HB09 334 aa12.41□□□□□ -0.42
CDCA3-204ENST00000535406 RRP7AQ9Y3A4 280 aaKnown RBP12.41□□□□□ -0.42
CDCA3-204ENST00000535406 BRCA1P38398 1863 aaKnown RBP12.41□□□□□ -0.42
CDCA3-204ENST00000535406 A0A0G2JLW4 131 aa12.4□□□□□ -0.42
CDCA3-204ENST00000535406 PIP4K2AP48426 406 aaPredicted RBP12.4□□□□□ -0.42
CDCA3-204ENST00000535406 ADAMTS8Q9UP79 889 aa12.4□□□□□ -0.42
CDCA3-204ENST00000535406 TBC1D2BQ9UPU7 963 aa12.4□□□□□ -0.42
CDCA3-204ENST00000535406 DPEP1P16444 411 aa12.39□□□□□ -0.43
CDCA3-204ENST00000535406 EIF4A1P60842 406 aaKnown RBP12.39□□□□□ -0.43
CDCA3-204ENST00000535406 NEUROD2Q15784 382 aa12.39□□□□□ -0.43
CDCA3-204ENST00000535406 BICDL1Q6ZP65 573 aa12.39□□□□□ -0.43
CDCA3-204ENST00000535406 DZIP3Q86Y13 1208 aaKnown RBP12.39□□□□□ -0.43
CDCA3-204ENST00000535406 TSPYL4Q9UJ04 414 aa12.39□□□□□ -0.43
CDCA3-204ENST00000535406 CARMIL3Q8ND23 1372 aa12.38□□□□□ -0.43
CDCA3-204ENST00000535406 GIGYF1O75420 1035 aaPredicted RBP12.38□□□□□ -0.43
CDCA3-204ENST00000535406 CAMTA2O94983 1202 aa12.38□□□□□ -0.43
CDCA3-204ENST00000535406 SERPINB2P05120 415 aa12.38□□□□□ -0.43
CDCA3-204ENST00000535406 TBC1D9BQ66K14 1250 aa12.38□□□□□ -0.43
CDCA3-204ENST00000535406 NBPF26B4DH59 902 aa12.37□□□□□ -0.43
CDCA3-204ENST00000535406 POLA2Q14181 598 aa12.37□□□□□ -0.43
CDCA3-204ENST00000535406 NBPF10Q6P3W6 841 aaKnown RBP12.37□□□□□ -0.43
CDCA3-204ENST00000535406 NBPF15Q8N660 670 aa12.37□□□□□ -0.43
CDCA3-204ENST00000535406 ZNF784Q8NCA9 323 aaPredicted RBP12.37□□□□□ -0.43
CDCA3-204ENST00000535406 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
CDCA3-204ENST00000535406 BABAM1Q9NWV8 329 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms