RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 TAF7Q15545 349 aaPredicted RBP18.23■□□□□ 0.51
TMEM258-203ENST00000535297 CD2APQ9Y5K6 639 aa18.23■□□□□ 0.51
TMEM258-203ENST00000535297 MMP10P09238 476 aa18.22■□□□□ 0.51
TMEM258-203ENST00000535297 NLGN2Q8NFZ4 835 aa18.21■□□□□ 0.51
TMEM258-203ENST00000535297 PNISRQ8TF01 805 aaKnown RBP18.21■□□□□ 0.51
TMEM258-203ENST00000535297 LAMB4A4D0S4 1761 aa18.21■□□□□ 0.51
TMEM258-203ENST00000535297 KIF13BQ9NQT8 1826 aa18.21■□□□□ 0.51
TMEM258-203ENST00000535297 LMOD3Q0VAK6 560 aa18.2■□□□□ 0.5
TMEM258-203ENST00000535297 SRP68Q9UHB9 627 aaKnown RBP18.2■□□□□ 0.5
TMEM258-203ENST00000535297 SCN7AQ01118 1682 aa18.19■□□□□ 0.5
TMEM258-203ENST00000535297 TMPOP42166 694 aaKnown RBP18.19■□□□□ 0.5
TMEM258-203ENST00000535297 RIPK4P57078 832 aa18.19■□□□□ 0.5
TMEM258-203ENST00000535297 RUNDC1Q96C34 613 aa18.19■□□□□ 0.5
TMEM258-203ENST00000535297 C10orf71Q711Q0 1435 aa18.18■□□□□ 0.5
TMEM258-203ENST00000535297 ZPR1O75312 459 aa18.18■□□□□ 0.5
TMEM258-203ENST00000535297 SNRPA1P09661 255 aaKnown RBP18.18■□□□□ 0.5
TMEM258-203ENST00000535297 CANXP27824 592 aaKnown RBP18.18■□□□□ 0.5
TMEM258-203ENST00000535297 EIF5P55010 431 aaKnown RBP18.18■□□□□ 0.5
TMEM258-203ENST00000535297 CCDC146Q8IYE0 955 aa18.18■□□□□ 0.5
TMEM258-203ENST00000535297 THUMPD2Q9BTF0 503 aaKnown RBP18.18■□□□□ 0.5
TMEM258-203ENST00000535297 NARFQ9UHQ1 456 aa18.18■□□□□ 0.5
TMEM258-203ENST00000535297 ADAMTS8Q9UP79 889 aa18.18■□□□□ 0.5
TMEM258-203ENST00000535297 A0A087WZG4 1122 aa18.17■□□□□ 0.5
TMEM258-203ENST00000535297 IL6STP40189 918 aaPredicted RBP18.17■□□□□ 0.5
TMEM258-203ENST00000535297 FKBP8Q14318 412 aa18.17■□□□□ 0.5
TMEM258-203ENST00000535297 USPL1Q5W0Q7 1092 aa18.17■□□□□ 0.5
TMEM258-203ENST00000535297 PARP3Q9Y6F1 533 aa18.17■□□□□ 0.5
TMEM258-203ENST00000535297 KIAA1551Q9HCM1 1747 aa18.15■□□□□ 0.5
TMEM258-203ENST00000535297 GPR162Q16538 588 aa18.15■□□□□ 0.5
TMEM258-203ENST00000535297 MIS18AQ9NYP9 233 aa18.15■□□□□ 0.5
TMEM258-203ENST00000535297 USP16Q9Y5T5 823 aa18.15■□□□□ 0.5
TMEM258-203ENST00000535297 BCORQ6W2J9 1755 aa18.14■□□□□ 0.5
TMEM258-203ENST00000535297 PRAMEF22A3QJZ6 481 aa18.14■□□□□ 0.49
TMEM258-203ENST00000535297 ANP32CO43423 234 aa18.14■□□□□ 0.49
TMEM258-203ENST00000535297 A1BGP04217 495 aa18.14■□□□□ 0.49
TMEM258-203ENST00000535297 RRP7AQ9Y3A4 280 aaKnown RBP18.14■□□□□ 0.49
TMEM258-203ENST00000535297 CHD4Q14839 1912 aa18.13■□□□□ 0.49
TMEM258-203ENST00000535297 DDR1Q08345 913 aa18.13■□□□□ 0.49
TMEM258-203ENST00000535297 NPM2Q86SE8 214 aaKnown RBP18.13■□□□□ 0.49
TMEM258-203ENST00000535297 BABAM1Q9NWV8 329 aa18.13■□□□□ 0.49
TMEM258-203ENST00000535297 PXDNLA1KZ92 1463 aa18.13■□□□□ 0.49
TMEM258-203ENST00000535297 NRXN2Q9P2S2 1712 aa18.12■□□□□ 0.49
TMEM258-203ENST00000535297 TM4SF1P30408 202 aa18.12■□□□□ 0.49
TMEM258-203ENST00000535297 EIF4A1P60842 406 aaKnown RBP18.12■□□□□ 0.49
TMEM258-203ENST00000535297 PELP1Q8IZL8 1130 aaKnown RBP18.12■□□□□ 0.49
TMEM258-203ENST00000535297 BCL2L12Q9HB09 334 aa18.12■□□□□ 0.49
TMEM258-203ENST00000535297 TSPYL4Q9UJ04 414 aa18.12■□□□□ 0.49
TMEM258-203ENST00000535297 ZNF330Q9Y3S2 320 aaPredicted RBP18.12■□□□□ 0.49
TMEM258-203ENST00000535297 POLRMTO00411 1230 aaKnown RBP18.11■□□□□ 0.49
TMEM258-203ENST00000535297 NEUROD2Q15784 382 aa18.11■□□□□ 0.49
TMEM258-203ENST00000535297 AFDNP55196 1824 aaKnown RBP18.11■□□□□ 0.49
TMEM258-203ENST00000535297 N4BP2Q86UW6 1770 aaPredicted RBP18.1■□□□□ 0.49
TMEM258-203ENST00000535297 GIGYF1O75420 1035 aaPredicted RBP18.1■□□□□ 0.49
TMEM258-203ENST00000535297 TGFB2P61812 414 aa18.1■□□□□ 0.49
TMEM258-203ENST00000535297 NFIXQ14938 502 aa18.1■□□□□ 0.49
TMEM258-203ENST00000535297 TRIM35Q9UPQ4 493 aa18.1■□□□□ 0.49
TMEM258-203ENST00000535297 GRIN3BO60391 1043 aa18.09■□□□□ 0.49
TMEM258-203ENST00000535297 YBX3P16989 372 aaKnown RBP eCLIP18.09■□□□□ 0.496e-35■□□□□ 10.3
TMEM258-203ENST00000535297 YY1P25490 414 aa18.09■□□□□ 0.49
TMEM258-203ENST00000535297 BRCA1P38398 1863 aaKnown RBP18.08■□□□□ 0.49
TMEM258-203ENST00000535297 CAMTA2O94983 1202 aa18.08■□□□□ 0.48
TMEM258-203ENST00000535297 PIP4K2AP48426 406 aaPredicted RBP18.08■□□□□ 0.48
TMEM258-203ENST00000535297 CCDC184Q52MB2 194 aa18.08■□□□□ 0.48
TMEM258-203ENST00000535297 DZIP3Q86Y13 1208 aaKnown RBP18.08■□□□□ 0.48
TMEM258-203ENST00000535297 TBC1D2BQ9UPU7 963 aa18.08■□□□□ 0.48
TMEM258-203ENST00000535297 NBPF26B4DH59 902 aa18.07■□□□□ 0.48
TMEM258-203ENST00000535297 NBPF10Q6P3W6 841 aaKnown RBP18.07■□□□□ 0.48
TMEM258-203ENST00000535297 NBPF15Q8N660 670 aa18.07■□□□□ 0.48
TMEM258-203ENST00000535297 ERBB4Q15303 1308 aa18.06■□□□□ 0.48
TMEM258-203ENST00000535297 APAF1O14727 1248 aa18.06■□□□□ 0.48
TMEM258-203ENST00000535297 RGL2O15211 777 aa18.06■□□□□ 0.48
TMEM258-203ENST00000535297 MRS2Q9HD23 443 aa18.06■□□□□ 0.48
TMEM258-203ENST00000535297 UTRNP46939 3433 aa18.06■□□□□ 0.48
TMEM258-203ENST00000535297 CARMIL3Q8ND23 1372 aa18.05■□□□□ 0.48
TMEM258-203ENST00000535297 CHL1O00533 1208 aa18.05■□□□□ 0.48
TMEM258-203ENST00000535297 SERPINB2P05120 415 aa18.05■□□□□ 0.48
TMEM258-203ENST00000535297 TBC1D9BQ66K14 1250 aa18.05■□□□□ 0.48
TMEM258-203ENST00000535297 DPEP1P16444 411 aa18.04■□□□□ 0.48
TMEM258-203ENST00000535297 CLEC4GQ6UXB4 293 aa18.04■□□□□ 0.48
TMEM258-203ENST00000535297 ZNF652Q9Y2D9 606 aa18.04■□□□□ 0.48
TMEM258-203ENST00000535297 A0A0G2JLW4 131 aa18.03■□□□□ 0.48
TMEM258-203ENST00000535297 BICDL1Q6ZP65 573 aa18.03■□□□□ 0.48
TMEM258-203ENST00000535297 DLEC1Q9Y238 1755 aa18.03■□□□□ 0.48
TMEM258-203ENST00000535297 GOLGB1Q14789 3259 aaKnown RBP18.03■□□□□ 0.48
TMEM258-203ENST00000535297 CALD1Q05682 793 aaKnown RBP18.02■□□□□ 0.48
TMEM258-203ENST00000535297 CFAP44Q96MT7 982 aa18.02■□□□□ 0.48
TMEM258-203ENST00000535297 ARFGEF1Q9Y6D6 1849 aa18.02■□□□□ 0.47
TMEM258-203ENST00000535297 SETDB2Q96T68 719 aa18.01■□□□□ 0.47
TMEM258-203ENST00000535297 WWC3Q9ULE0 1092 aa18.01■□□□□ 0.47
TMEM258-203ENST00000535297 LAS1LQ9Y4W2 734 aaKnown RBP18.01■□□□□ 0.47
TMEM258-203ENST00000535297 ANKRD31Q8N7Z5 1873 aa18.01■□□□□ 0.47
TMEM258-203ENST00000535297 HOXB7P09629 217 aa17.99■□□□□ 0.47
TMEM258-203ENST00000535297 KCNA3P22001 575 aa17.99■□□□□ 0.47
TMEM258-203ENST00000535297 IFT57Q9NWB7 429 aa17.99■□□□□ 0.47
TMEM258-203ENST00000535297 PIM2Q9P1W9 311 aa17.99■□□□□ 0.47
TMEM258-203ENST00000535297 BCS1LQ9Y276 419 aa17.99■□□□□ 0.47
TMEM258-203ENST00000535297 NUP98P52948 1817 aa17.99■□□□□ 0.47
TMEM258-203ENST00000535297 ERVV-1B6SEH8 477 aa17.98■□□□□ 0.47
TMEM258-203ENST00000535297 ZNF853P0CG23 659 aa17.98■□□□□ 0.47
TMEM258-203ENST00000535297 MYL6BP14649 208 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms