RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 LETM1O95202 739 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-232ENST00000535094 F13A1P00488 732 aa18.97■□□□□ 0.63
MCF2L-232ENST00000535094 DDX11Q96FC9 970 aa18.97■□□□□ 0.63
MCF2L-232ENST00000535094 NUP62CLQ9H1M0 184 aa18.97■□□□□ 0.63
MCF2L-232ENST00000535094 TPD52L1Q16890 204 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-232ENST00000535094 PNPLA6Q8IY17 1366 aa18.97■□□□□ 0.63
MCF2L-232ENST00000535094 PTGS1P23219 599 aa18.96■□□□□ 0.63
MCF2L-232ENST00000535094 LUZP1Q86V48 1076 aa18.96■□□□□ 0.63
MCF2L-232ENST00000535094 IL25Q9H293 177 aa18.96■□□□□ 0.63
MCF2L-232ENST00000535094 MROH2AA6NES4 1674 aa18.96■□□□□ 0.63
MCF2L-232ENST00000535094 PPRC1Q5VV67 1664 aaKnown RBP18.96■□□□□ 0.63
MCF2L-232ENST00000535094 KDM4AO75164 1064 aa18.96■□□□□ 0.63
MCF2L-232ENST00000535094 ANAPC15P60006 121 aa18.96■□□□□ 0.63
MCF2L-232ENST00000535094 KRT85P78386 507 aa18.96■□□□□ 0.63
MCF2L-232ENST00000535094 FSD1Q9BTV5 496 aa18.96■□□□□ 0.63
MCF2L-232ENST00000535094 BECN2A8MW95 431 aa18.96■□□□□ 0.63
MCF2L-232ENST00000535094 RAB11FIP3O75154 756 aa18.96■□□□□ 0.63
MCF2L-232ENST00000535094 AACSQ86V21 672 aa18.96■□□□□ 0.63
MCF2L-232ENST00000535094 CCDC8Q9H0W5 538 aaPredicted RBP18.96■□□□□ 0.63
MCF2L-232ENST00000535094 SNX14Q9Y5W7 946 aa18.96■□□□□ 0.63
MCF2L-232ENST00000535094 PI4KAP2A4QPH2 592 aa18.95■□□□□ 0.62
MCF2L-232ENST00000535094 PI4KAP1Q8N8J0 262 aa18.95■□□□□ 0.62
MCF2L-232ENST00000535094 PA2G4Q9UQ80 394 aaKnown RBP18.95■□□□□ 0.62
MCF2L-232ENST00000535094 TTC21BQ7Z4L5 1316 aa18.95■□□□□ 0.62
MCF2L-232ENST00000535094 CFAP74Q9C0B2 1584 aa18.95■□□□□ 0.62
MCF2L-232ENST00000535094 TERF1P54274 439 aa18.95■□□□□ 0.62
MCF2L-232ENST00000535094 MYRIPQ8NFW9 859 aa18.95■□□□□ 0.62
MCF2L-232ENST00000535094 PIBF1Q8WXW3 757 aa18.95■□□□□ 0.62
MCF2L-232ENST00000535094 KIF1BPQ96EK5 621 aa18.95■□□□□ 0.62
MCF2L-232ENST00000535094 ADGRB1O14514 1584 aa18.95■□□□□ 0.62
MCF2L-232ENST00000535094 MAP3K19Q56UN5 1328 aa18.95■□□□□ 0.62
MCF2L-232ENST00000535094 CCDC186Q7Z3E2 898 aa18.95■□□□□ 0.62
MCF2L-232ENST00000535094 FILIP1Q7Z7B0 1213 aa18.95■□□□□ 0.62
MCF2L-232ENST00000535094 GNAT3A8MTJ3 354 aa18.94■□□□□ 0.62
MCF2L-232ENST00000535094 MAP3K11Q16584 847 aa18.94■□□□□ 0.62
MCF2L-232ENST00000535094 ADGRB3O60242 1522 aa18.94■□□□□ 0.62
MCF2L-232ENST00000535094 CCDC94Q9BW85 323 aaPredicted RBP18.94■□□□□ 0.62
MCF2L-232ENST00000535094 BOLA2Q9H3K6 86 aa18.94■□□□□ 0.62
MCF2L-232ENST00000535094 SPATA32Q96LK8 384 aa18.94■□□□□ 0.62
MCF2L-232ENST00000535094 PIK3R4Q99570 1358 aa18.93■□□□□ 0.62
MCF2L-232ENST00000535094 CUL4AQ13619 759 aa18.93■□□□□ 0.62
MCF2L-232ENST00000535094 PYCARDQ9ULZ3 195 aa18.93■□□□□ 0.62
MCF2L-232ENST00000535094 EYA1Q99502 592 aa18.93■□□□□ 0.62
MCF2L-232ENST00000535094 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.93■□□□□ 0.624e-7■■□□□ 14
MCF2L-232ENST00000535094 V9GYY5 206 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-232ENST00000535094 MED14O60244 1454 aa18.93■□□□□ 0.62
MCF2L-232ENST00000535094 RIOK3O14730 519 aaKnown RBP18.92■□□□□ 0.62
MCF2L-232ENST00000535094 LARGE1O95461 756 aa18.92■□□□□ 0.62
MCF2L-232ENST00000535094 NBPF7P0C2Y1 421 aaPredicted RBP18.92■□□□□ 0.62
MCF2L-232ENST00000535094 U2AF2P26368 475 aaKnown RBP eCLIP18.92■□□□□ 0.622e-7■■□□□ 11.9
MCF2L-232ENST00000535094 PRIMPOLQ96LW4 560 aa18.92■□□□□ 0.62
MCF2L-232ENST00000535094 G3BP1Q13283 466 aaKnown RBP eCLIP18.92■□□□□ 0.62
MCF2L-232ENST00000535094 UVSSAQ2YD98 709 aa18.92■□□□□ 0.62
MCF2L-232ENST00000535094 FMNL2Q96PY5 1086 aa18.92■□□□□ 0.62
MCF2L-232ENST00000535094 DACT1Q9NYF0 836 aa18.92■□□□□ 0.62
MCF2L-232ENST00000535094 KIAA1210Q9ULL0 1709 aa18.92■□□□□ 0.62
MCF2L-232ENST00000535094 RUFY3Q7L099 469 aa18.92■□□□□ 0.62
MCF2L-232ENST00000535094 RBM33Q96EV2 1170 aaKnown RBP18.92■□□□□ 0.62
MCF2L-232ENST00000535094 USP44Q9H0E7 712 aa18.92■□□□□ 0.62
MCF2L-232ENST00000535094 ABTB2Q8N961 1025 aa18.91■□□□□ 0.62
MCF2L-232ENST00000535094 HSPA4P34932 840 aa18.91■□□□□ 0.62
MCF2L-232ENST00000535094 BCL2L12Q9HB09 334 aa18.91■□□□□ 0.62
MCF2L-232ENST00000535094 TRMT1Q9NXH9 659 aaKnown RBP18.91■□□□□ 0.62
MCF2L-232ENST00000535094 LRMPQ12912 555 aa18.9■□□□□ 0.62
MCF2L-232ENST00000535094 NRXN1Q9ULB1 1477 aa18.9■□□□□ 0.62
MCF2L-232ENST00000535094 BLOC1S2Q6QNY1 142 aa18.9■□□□□ 0.62
MCF2L-232ENST00000535094 ATP10DQ9P241 1426 aa18.9■□□□□ 0.62
MCF2L-232ENST00000535094 ADCK5Q3MIX3 580 aa18.9■□□□□ 0.62
MCF2L-232ENST00000535094 ANO6Q4KMQ2 910 aa18.9■□□□□ 0.62
MCF2L-232ENST00000535094 COL3A1P02461 1466 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-232ENST00000535094 SGSM2O43147 1006 aa18.89■□□□□ 0.62
MCF2L-232ENST00000535094 CHPF2Q9P2E5 772 aa18.89■□□□□ 0.62
MCF2L-232ENST00000535094 SOS1Q07889 1333 aaPredicted RBP18.89■□□□□ 0.61
MCF2L-232ENST00000535094 SETBP1Q9Y6X0 1596 aa18.89■□□□□ 0.61
MCF2L-232ENST00000535094 GLRX3O76003 335 aaKnown RBP18.89■□□□□ 0.61
MCF2L-232ENST00000535094 LRRC2Q9BYS8 371 aa18.89■□□□□ 0.61
MCF2L-232ENST00000535094 OSBPL3Q9H4L5 887 aa18.89■□□□□ 0.61
MCF2L-232ENST00000535094 TNNT1P13805 278 aa18.89■□□□□ 0.61
MCF2L-232ENST00000535094 PTH1RQ03431 593 aa18.89■□□□□ 0.61
MCF2L-232ENST00000535094 HSP90AB4PQ58FF6 505 aa18.89■□□□□ 0.61
MCF2L-232ENST00000535094 CCDC112Q8NEF3 446 aa18.88■□□□□ 0.61
MCF2L-232ENST00000535094 EDC4Q6P2E9 1401 aaKnown RBP18.88■□□□□ 0.61
MCF2L-232ENST00000535094 DNAJC2Q99543 621 aaKnown RBP18.88■□□□□ 0.61
MCF2L-232ENST00000535094 ADGRB2O60241 1585 aa18.88■□□□□ 0.61
MCF2L-232ENST00000535094 DNAJC25Q9H1X3 360 aa18.87■□□□□ 0.61
MCF2L-232ENST00000535094 ABCC3O15438 1527 aa18.87■□□□□ 0.61
MCF2L-232ENST00000535094 GUCY1B3Q02153 619 aa18.87■□□□□ 0.61
MCF2L-232ENST00000535094 RNF20Q5VTR2 975 aa18.87■□□□□ 0.61
MCF2L-232ENST00000535094 LIG1P18858 919 aa18.87■□□□□ 0.61
MCF2L-232ENST00000535094 TYRO3Q06418 890 aa18.87■□□□□ 0.61
MCF2L-232ENST00000535094 DNAAF4Q8WXU2 420 aa18.87■□□□□ 0.61
MCF2L-232ENST00000535094 RBM8AQ9Y5S9 174 aaKnown RBP18.87■□□□□ 0.61
MCF2L-232ENST00000535094 ZNF165P49910 485 aa18.86■□□□□ 0.61
MCF2L-232ENST00000535094 RAD50Q92878 1312 aa18.86■□□□□ 0.61
MCF2L-232ENST00000535094 MPRIPQ6WCQ1 1025 aa18.86■□□□□ 0.61
MCF2L-232ENST00000535094 FAM227BQ96M60 508 aa18.86■□□□□ 0.61
MCF2L-232ENST00000535094 NRBP1Q9UHY1 535 aa18.86■□□□□ 0.61
MCF2L-232ENST00000535094 YEATS2Q9ULM3 1422 aa18.85■□□□□ 0.61
MCF2L-232ENST00000535094 CDC37L1Q7L3B6 337 aa18.85■□□□□ 0.61
MCF2L-232ENST00000535094 CLIP2Q9UDT6 1046 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms