RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 C9orf78Q9NZ63 289 aaPredicted RBP8.2□□□□□ -1.1
RAG1-203ENST00000534663 TFIP11Q9UBB9 837 aaKnown RBP8.2□□□□□ -1.1
RAG1-203ENST00000534663 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.2□□□□□ -1.1
RAG1-203ENST00000534663 ATP6V1DQ9Y5K8 247 aa8.2□□□□□ -1.1
RAG1-203ENST00000534663 PTPRMP28827 1452 aa8.2□□□□□ -1.1
RAG1-203ENST00000534663 GJB2P29033 226 aa8.2□□□□□ -1.1
RAG1-203ENST00000534663 AIMP1Q12904 312 aaKnown RBP8.2□□□□□ -1.1
RAG1-203ENST00000534663 RASEFQ8IZ41 740 aa8.2□□□□□ -1.1
RAG1-203ENST00000534663 ARHGEF28Q8N1W1 1705 aaKnown RBP8.2□□□□□ -1.1
RAG1-203ENST00000534663 IFIT2P09913 472 aaKnown RBP8.19□□□□□ -1.1
RAG1-203ENST00000534663 ZSCAN22P10073 491 aaPredicted RBP8.19□□□□□ -1.1
RAG1-203ENST00000534663 RHPN1Q8TCX5 695 aa8.19□□□□□ -1.1
RAG1-203ENST00000534663 NEXMIFQ5QGS0 1516 aa8.19□□□□□ -1.1
RAG1-203ENST00000534663 EYA1Q99502 592 aa8.19□□□□□ -1.1
RAG1-203ENST00000534663 PDRG1Q9NUG6 133 aa8.19□□□□□ -1.1
RAG1-203ENST00000534663 LIMCH1Q9UPQ0 1083 aa8.19□□□□□ -1.1
RAG1-203ENST00000534663 EDC4Q6P2E9 1401 aaKnown RBP8.19□□□□□ -1.1
RAG1-203ENST00000534663 MCM5P33992 734 aa8.19□□□□□ -1.1
RAG1-203ENST00000534663 LARP1BQ659C4 914 aaKnown RBP8.19□□□□□ -1.1
RAG1-203ENST00000534663 METP08581 1390 aa8.19□□□□□ -1.1
RAG1-203ENST00000534663 PI4KAP2A4QPH2 592 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 GNAT3A8MTJ3 354 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 NBPF7P0C2Y1 421 aaPredicted RBP8.18□□□□□ -1.1
RAG1-203ENST00000534663 ZKSCAN1P17029 563 aaPredicted RBP8.18□□□□□ -1.1
RAG1-203ENST00000534663 CLASRPQ8N2M8 674 aaKnown RBP8.18□□□□□ -1.1
RAG1-203ENST00000534663 PI4KAP1Q8N8J0 262 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 BICD2Q8TD16 824 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 RBM33Q96EV2 1170 aaKnown RBP8.18□□□□□ -1.1
RAG1-203ENST00000534663 PA2G4Q9UQ80 394 aaKnown RBP8.18□□□□□ -1.1
RAG1-203ENST00000534663 KIF3AQ9Y496 699 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 IFT172Q9UG01 1749 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 PRR36Q9H6K5 1346 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 HSP90B1P14625 803 aaKnown RBP8.18□□□□□ -1.1
RAG1-203ENST00000534663 HDGFP51858 240 aaKnown RBP8.18□□□□□ -1.1
RAG1-203ENST00000534663 PPP4R3BQ5MIZ7 849 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 INTS4Q96HW7 963 aaKnown RBP8.18□□□□□ -1.1
RAG1-203ENST00000534663 TRIM5Q9C035 493 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 USP44Q9H0E7 712 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 SNX14Q9Y5W7 946 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 LARGE1O95461 756 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 F13A1P00488 732 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 UBE2HP62256 183 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 FAM184AQ8NB25 1140 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 CYP46A1Q9Y6A2 500 aa8.18□□□□□ -1.1
RAG1-203ENST00000534663 ANAPC15P60006 121 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 TEFQ10587 303 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 CUL4AQ13619 759 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 C16orf45Q96MC5 204 aaPredicted RBP8.17□□□□□ -1.1
RAG1-203ENST00000534663 CCDC8Q9H0W5 538 aaPredicted RBP8.17□□□□□ -1.1
RAG1-203ENST00000534663 NEO1Q92859 1461 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 GOLGA6L6A8MZA4 724 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 OSBPL3Q9H4L5 887 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 LMTK2Q8IWU2 1503 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 USP32Q8NFA0 1604 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 NPHP1O15259 732 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 CCDC192P0DO97 292 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 HSPA4P34932 840 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 HMGN5P82970 282 aaKnown RBP8.17□□□□□ -1.1
RAG1-203ENST00000534663 RUFY3Q7L099 469 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 AACSQ86V21 672 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 LUZP1Q86V48 1076 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 ABTB2Q8N961 1025 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 RUFY2Q8WXA3 655 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 KIF1BPQ96EK5 621 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 MLH3Q9UHC1 1453 aa8.17□□□□□ -1.1
RAG1-203ENST00000534663 ARHGEF40Q8TER5 1519 aa8.16□□□□□ -1.1
RAG1-203ENST00000534663 RAB11FIP3O75154 756 aa8.16□□□□□ -1.1
RAG1-203ENST00000534663 ADCK5Q3MIX3 580 aa8.16□□□□□ -1.1
RAG1-203ENST00000534663 DDX11Q96FC9 970 aa8.16□□□□□ -1.1
RAG1-203ENST00000534663 BOLA2Q9H3K6 86 aa8.16□□□□□ -1.1
RAG1-203ENST00000534663 CHPF2Q9P2E5 772 aa8.16□□□□□ -1.1
RAG1-203ENST00000534663 SOS1Q07889 1333 aaPredicted RBP8.16□□□□□ -1.1
RAG1-203ENST00000534663 KDM4AO75164 1064 aa8.16□□□□□ -1.1
RAG1-203ENST00000534663 MTERF4Q7Z6M4 381 aaKnown RBP8.16□□□□□ -1.1
RAG1-203ENST00000534663 FSD1Q9BTV5 496 aa8.16□□□□□ -1.1
RAG1-203ENST00000534663 SGSM2O43147 1006 aa8.16□□□□□ -1.1
RAG1-203ENST00000534663 PTGS1P23219 599 aa8.16□□□□□ -1.1
RAG1-203ENST00000534663 PTH1RQ03431 593 aa8.16□□□□□ -1.1
RAG1-203ENST00000534663 PIBF1Q8WXW3 757 aa8.16□□□□□ -1.1
RAG1-203ENST00000534663 GPATCH3Q96I76 525 aa8.16□□□□□ -1.1
RAG1-203ENST00000534663 TNMDQ9H2S6 317 aa8.16□□□□□ -1.1
RAG1-203ENST00000534663 TCHHQ07283 1943 aa8.15□□□□□ -1.1
RAG1-203ENST00000534663 KIF24Q5T7B8 1368 aa8.15□□□□□ -1.1
RAG1-203ENST00000534663 H3BQV1 296 aa8.15□□□□□ -1.1
RAG1-203ENST00000534663 IFFO2Q5TF58 517 aa8.15□□□□□ -1.1
RAG1-203ENST00000534663 PDCL2Q8N4E4 241 aa8.15□□□□□ -1.1
RAG1-203ENST00000534663 NUP62CLQ9H1M0 184 aa8.15□□□□□ -1.1
RAG1-203ENST00000534663 PYCARDQ9ULZ3 195 aa8.15□□□□□ -1.1
RAG1-203ENST00000534663 A0A0U1RQG5 324 aaPredicted RBP8.15□□□□□ -1.1
RAG1-203ENST00000534663 TERF1P54274 439 aa8.15□□□□□ -1.1
RAG1-203ENST00000534663 KRT85P78386 507 aa8.15□□□□□ -1.1
RAG1-203ENST00000534663 MYRIPQ8NFW9 859 aa8.15□□□□□ -1.1
RAG1-203ENST00000534663 HECW2Q9P2P5 1572 aa8.15□□□□□ -1.1
RAG1-203ENST00000534663 KIAA0232Q92628 1395 aa8.15□□□□□ -1.11
RAG1-203ENST00000534663 CPS1P31327 1500 aa8.15□□□□□ -1.11
RAG1-203ENST00000534663 LETM1O95202 739 aaPredicted RBP8.15□□□□□ -1.11
RAG1-203ENST00000534663 CEBPAP49715 358 aaPredicted RBP8.15□□□□□ -1.11
RAG1-203ENST00000534663 MPRIPQ6WCQ1 1025 aa8.15□□□□□ -1.11
RAG1-203ENST00000534663 CCDC186Q7Z3E2 898 aa8.15□□□□□ -1.11
RAG1-203ENST00000534663 IL17REQ8NFR9 667 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms