RNA–Protein interactions for RNA: ENST00000534538.1

RECQL4-207, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-207ENST00000534538 CHRNA5P30532 468 aa23.82■■□□□ 1.4
RECQL4-207ENST00000534538 C9orf131Q5VYM1 1079 aa23.82■■□□□ 1.4
RECQL4-207ENST00000534538 COL15A1P39059 1388 aa23.81■■□□□ 1.4
RECQL4-207ENST00000534538 TOMM70O94826 608 aa23.81■■□□□ 1.4
RECQL4-207ENST00000534538 NFIXQ14938 502 aa23.81■■□□□ 1.4
RECQL4-207ENST00000534538 COL3A1P02461 1466 aaPredicted RBP23.81■■□□□ 1.4
RECQL4-207ENST00000534538 VIRMAQ69YN4 1812 aaKnown RBP23.8■■□□□ 1.4
RECQL4-207ENST00000534538 STARD3NLO95772 234 aa23.8■■□□□ 1.4
RECQL4-207ENST00000534538 TTC5Q8N0Z6 440 aa23.8■■□□□ 1.4
RECQL4-207ENST00000534538 IL17REQ8NFR9 667 aa23.8■■□□□ 1.4
RECQL4-207ENST00000534538 GAS2L2Q8NHY3 880 aa23.8■■□□□ 1.4
RECQL4-207ENST00000534538 BCL2L12Q9HB09 334 aa23.8■■□□□ 1.4
RECQL4-207ENST00000534538 GNAT3A8MTJ3 354 aa23.79■■□□□ 1.4
RECQL4-207ENST00000534538 U2SURPO15042 1029 aaKnown RBP23.79■■□□□ 1.4
RECQL4-207ENST00000534538 EIF5P55010 431 aaKnown RBP23.78■■□□□ 1.4
RECQL4-207ENST00000534538 TEX13AQ9BXU3 409 aaPredicted RBP23.78■■□□□ 1.4
RECQL4-207ENST00000534538 CANXP27824 592 aaKnown RBP23.77■■□□□ 1.4
RECQL4-207ENST00000534538 TEFQ10587 303 aa23.77■■□□□ 1.4
RECQL4-207ENST00000534538 ZNF790Q6PG37 636 aa23.77■■□□□ 1.4
RECQL4-207ENST00000534538 NMRK2Q9NPI5 230 aa23.77■■□□□ 1.4
RECQL4-207ENST00000534538 UBR2Q8IWV8 1755 aa23.76■■□□□ 1.39
RECQL4-207ENST00000534538 A0A087WZG4 1122 aa23.76■■□□□ 1.39
RECQL4-207ENST00000534538 SERPINB2P05120 415 aa23.76■■□□□ 1.39
RECQL4-207ENST00000534538 APLP1P51693 650 aa23.75■■□□□ 1.39
RECQL4-207ENST00000534538 ZNF496Q96IT1 587 aaPredicted RBP23.75■■□□□ 1.39
RECQL4-207ENST00000534538 RNF181Q9P0P0 153 aa23.74■■□□□ 1.39
RECQL4-207ENST00000534538 HEG1Q9ULI3 1381 aa23.74■■□□□ 1.39
RECQL4-207ENST00000534538 NRXN2Q9P2S2 1712 aa23.73■■□□□ 1.39
RECQL4-207ENST00000534538 CNGB1Q14028 1251 aaPredicted RBP23.73■■□□□ 1.39
RECQL4-207ENST00000534538 KDM2BQ8NHM5 1336 aa23.73■■□□□ 1.39
RECQL4-207ENST00000534538 AFDNP55196 1824 aaKnown RBP23.73■■□□□ 1.39
RECQL4-207ENST00000534538 RBM46Q8TBY0 533 aaKnown RBP23.72■■□□□ 1.39
RECQL4-207ENST00000534538 CFAP53Q96M91 514 aa23.72■■□□□ 1.39
RECQL4-207ENST00000534538 CEMIPQ8WUJ3 1361 aa23.72■■□□□ 1.39
RECQL4-207ENST00000534538 TTLL6Q8N841 843 aa23.71■■□□□ 1.39
RECQL4-207ENST00000534538 FMNL2Q96PY5 1086 aa23.71■■□□□ 1.39
RECQL4-207ENST00000534538 IL6STP40189 918 aaPredicted RBP23.7■■□□□ 1.38
RECQL4-207ENST00000534538 PHACTR3Q96KR7 559 aa23.7■■□□□ 1.38
RECQL4-207ENST00000534538 ZC3H4Q9UPT8 1303 aaKnown RBP23.69■■□□□ 1.38
RECQL4-207ENST00000534538 H0YIN7 160 aa23.69■■□□□ 1.38
RECQL4-207ENST00000534538 IFFO2Q5TF58 517 aa23.69■■□□□ 1.38
RECQL4-207ENST00000534538 RSPH6AQ9H0K4 717 aa23.69■■□□□ 1.38
RECQL4-207ENST00000534538 PDZRN3Q9UPQ7 1066 aa23.69■■□□□ 1.38
RECQL4-207ENST00000534538 SBF1O95248 1867 aa23.68■■□□□ 1.38
RECQL4-207ENST00000534538 PRKAR2BP31323 418 aa23.68■■□□□ 1.38
RECQL4-207ENST00000534538 C2CD5Q86YS7 1000 aa23.68■■□□□ 1.38
RECQL4-207ENST00000534538 C16orf71Q8IYS4 520 aaPredicted RBP23.68■■□□□ 1.38
RECQL4-207ENST00000534538 NUDCQ9Y266 331 aa23.68■■□□□ 1.38
RECQL4-207ENST00000534538 FSTL1Q12841 308 aa23.67■■□□□ 1.38
RECQL4-207ENST00000534538 TBC1D9BQ66K14 1250 aa23.67■■□□□ 1.38
RECQL4-207ENST00000534538 BICDL1Q6ZP65 573 aa23.67■■□□□ 1.38
RECQL4-207ENST00000534538 DNAJC5GQ8N7S2 189 aa23.67■■□□□ 1.38
RECQL4-207ENST00000534538 SIPA1L3O60292 1781 aaPredicted RBP23.67■■□□□ 1.38
RECQL4-207ENST00000534538 BTBD11A6QL63 1104 aa23.66■■□□□ 1.38
RECQL4-207ENST00000534538 A1BGP04217 495 aa23.66■■□□□ 1.38
RECQL4-207ENST00000534538 LMNB1P20700 586 aa23.66■■□□□ 1.38
RECQL4-207ENST00000534538 BRIP1Q9BX63 1249 aa23.66■■□□□ 1.38
RECQL4-207ENST00000534538 TBC1D2BQ9UPU7 963 aa23.66■■□□□ 1.38
RECQL4-207ENST00000534538 RRAGCQ9HB90 399 aa23.65■■□□□ 1.38
RECQL4-207ENST00000534538 CARMIL3Q8ND23 1372 aa23.65■■□□□ 1.38
RECQL4-207ENST00000534538 PDE6BP35913 854 aa23.64■■□□□ 1.37
RECQL4-207ENST00000534538 RASSF7Q02833 373 aa23.64■■□□□ 1.37
RECQL4-207ENST00000534538 NPM2Q86SE8 214 aaKnown RBP23.64■■□□□ 1.37
RECQL4-207ENST00000534538 DLEC1Q9Y238 1755 aa23.63■■□□□ 1.37
RECQL4-207ENST00000534538 KCNQ3O43525 872 aa23.63■■□□□ 1.37
RECQL4-207ENST00000534538 PPP2R1AP30153 589 aa23.63■■□□□ 1.37
RECQL4-207ENST00000534538 CAMTA2O94983 1202 aa23.62■■□□□ 1.37
RECQL4-207ENST00000534538 U2AF1L5P0DN76 240 aaPredicted RBP23.62■■□□□ 1.37
RECQL4-207ENST00000534538 PRELPP51888 382 aa23.62■■□□□ 1.37
RECQL4-207ENST00000534538 U2AF1Q01081 240 aaKnown RBP eCLIP23.62■■□□□ 1.37
RECQL4-207ENST00000534538 PRR5LQ6MZQ0 368 aa23.62■■□□□ 1.37
RECQL4-207ENST00000534538 ZNF330Q9Y3S2 320 aaPredicted RBP23.62■■□□□ 1.37
RECQL4-207ENST00000534538 SETDB2Q96T68 719 aa23.61■■□□□ 1.37
RECQL4-207ENST00000534538 USP16Q9Y5T5 823 aa23.61■■□□□ 1.37
RECQL4-207ENST00000534538 GLTPD2A6NH11 291 aa23.6■■□□□ 1.37
RECQL4-207ENST00000534538 HTATSF1O43719 755 aaKnown RBP23.6■■□□□ 1.37
RECQL4-207ENST00000534538 RTF1Q92541 710 aaKnown RBP23.6■■□□□ 1.37
RECQL4-207ENST00000534538 NFKBIEO00221 500 aa23.59■■□□□ 1.37
RECQL4-207ENST00000534538 SNRPA1P09661 255 aaKnown RBP23.59■■□□□ 1.37
RECQL4-207ENST00000534538 SCN7AQ01118 1682 aa23.58■■□□□ 1.37
RECQL4-207ENST00000534538 TNRC6CQ9HCJ0 1690 aaKnown RBP23.58■■□□□ 1.37
RECQL4-207ENST00000534538 VEGFAP15692 232 aaPredicted RBP23.58■■□□□ 1.37
RECQL4-207ENST00000534538 DZIP3Q86Y13 1208 aaKnown RBP23.58■■□□□ 1.37
RECQL4-207ENST00000534538 ZNF622Q969S3 477 aaKnown RBP eCLIP23.58■■□□□ 1.371e-10■■■□□ 16.1
RECQL4-207ENST00000534538 CLEC4GQ6UXB4 293 aa23.57■■□□□ 1.36
RECQL4-207ENST00000534538 MCM10Q7L590 875 aa23.57■■□□□ 1.36
RECQL4-207ENST00000534538 CNBD1Q8NA66 436 aa23.57■■□□□ 1.36
RECQL4-207ENST00000534538 SMC1BQ8NDV3 1235 aa23.57■■□□□ 1.36
RECQL4-207ENST00000534538 CCDC24Q8N4L8 307 aa23.56■■□□□ 1.36
RECQL4-207ENST00000534538 ANKRD31Q8N7Z5 1873 aa23.56■■□□□ 1.36
RECQL4-207ENST00000534538 C21orf2O43822 256 aa23.55■■□□□ 1.36
RECQL4-207ENST00000534538 PRAMEF22A3QJZ6 481 aa23.54■■□□□ 1.36
RECQL4-207ENST00000534538 RGL2O15211 777 aa23.54■■□□□ 1.36
RECQL4-207ENST00000534538 ST5P78524 1137 aa23.54■■□□□ 1.36
RECQL4-207ENST00000534538 STYK1Q6J9G0 422 aa23.54■■□□□ 1.36
RECQL4-207ENST00000534538 CNKSR1Q969H4 720 aa23.54■■□□□ 1.36
RECQL4-207ENST00000534538 NPHP1O15259 732 aa23.53■■□□□ 1.36
RECQL4-207ENST00000534538 SRGNP10124 158 aa23.53■■□□□ 1.36
RECQL4-207ENST00000534538 DPY19L2Q6NUT2 758 aa23.53■■□□□ 1.36
RECQL4-207ENST00000534538 KLRG1Q96E93 195 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms