RNA–Protein interactions for RNA: ENST00000534495.1

LMNB2-206, Transcript of lamin B2, humanhuman

TSL 3

Gene LMNB2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-206ENST00000534495 STARD3NLO95772 234 aa28.28■■■□□ 2.12
LMNB2-206ENST00000534495 TEX13AQ9BXU3 409 aaPredicted RBP28.28■■■□□ 2.12
LMNB2-206ENST00000534495 YY1P25490 414 aa28.27■■■□□ 2.12
LMNB2-206ENST00000534495 NFE2L2Q16236 605 aa28.27■■■□□ 2.12
LMNB2-206ENST00000534495 PRKRIP1Q9H875 184 aaPredicted RBP28.27■■■□□ 2.12
LMNB2-206ENST00000534495 COL15A1P39059 1388 aa28.25■■■□□ 2.11
LMNB2-206ENST00000534495 MAPK8IP3Q9UPT6 1336 aa28.25■■■□□ 2.11
LMNB2-206ENST00000534495 FKBP8Q14318 412 aa28.25■■■□□ 2.11
LMNB2-206ENST00000534495 ZPR1O75312 459 aa28.23■■■□□ 2.11
LMNB2-206ENST00000534495 CANXP27824 592 aaKnown RBP28.23■■■□□ 2.11
LMNB2-206ENST00000534495 TAF7Q15545 349 aaPredicted RBP28.23■■■□□ 2.11
LMNB2-206ENST00000534495 PELP1Q8IZL8 1130 aaKnown RBP28.23■■■□□ 2.11
LMNB2-206ENST00000534495 YBX3P16989 372 aaKnown RBP eCLIP28.22■■■□□ 2.11
LMNB2-206ENST00000534495 EIF5P55010 431 aaKnown RBP28.22■■■□□ 2.11
LMNB2-206ENST00000534495 USPL1Q5W0Q7 1092 aa28.22■■■□□ 2.11
LMNB2-206ENST00000534495 NARFQ9UHQ1 456 aa28.22■■■□□ 2.11
LMNB2-206ENST00000534495 KIAA1551Q9HCM1 1747 aa28.21■■■□□ 2.11
LMNB2-206ENST00000534495 PARP3Q9Y6F1 533 aa28.21■■■□□ 2.11
LMNB2-206ENST00000534495 KDM3BQ7LBC6 1761 aa28.21■■■□□ 2.11
LMNB2-206ENST00000534495 C10orf71Q711Q0 1435 aa28.2■■■□□ 2.11
LMNB2-206ENST00000534495 N4BP2Q86UW6 1770 aaPredicted RBP28.19■■■□□ 2.1
LMNB2-206ENST00000534495 TM4SF1P30408 202 aa28.18■■■□□ 2.1
LMNB2-206ENST00000534495 DDR1Q08345 913 aa28.18■■■□□ 2.1
LMNB2-206ENST00000534495 USP16Q9Y5T5 823 aa28.18■■■□□ 2.1
LMNB2-206ENST00000534495 A1BGP04217 495 aa28.17■■■□□ 2.1
LMNB2-206ENST00000534495 SNRPA1P09661 255 aaKnown RBP28.17■■■□□ 2.1
LMNB2-206ENST00000534495 THUMPD2Q9BTF0 503 aaKnown RBP28.17■■■□□ 2.1
LMNB2-206ENST00000534495 MIS18AQ9NYP9 233 aa28.17■■■□□ 2.1
LMNB2-206ENST00000534495 PRAMEF22A3QJZ6 481 aa28.16■■■□□ 2.1
LMNB2-206ENST00000534495 GRIN3BO60391 1043 aa28.16■■■□□ 2.1
LMNB2-206ENST00000534495 IL6STP40189 918 aaPredicted RBP28.16■■■□□ 2.1
LMNB2-206ENST00000534495 PNISRQ8TF01 805 aaKnown RBP28.16■■■□□ 2.1
LMNB2-206ENST00000534495 BCL2L12Q9HB09 334 aa28.16■■■□□ 2.1
LMNB2-206ENST00000534495 AFDNP55196 1824 aaKnown RBP28.15■■■□□ 2.1
LMNB2-206ENST00000534495 PXDNLA1KZ92 1463 aa28.15■■■□□ 2.1
LMNB2-206ENST00000534495 A0A087WZG4 1122 aa28.15■■■□□ 2.1
LMNB2-206ENST00000534495 WDR43Q15061 677 aaKnown RBP eCLIP28.15■■■□□ 2.1
LMNB2-206ENST00000534495 POLRMTO00411 1230 aaKnown RBP28.14■■■□□ 2.1
LMNB2-206ENST00000534495 TMPOP42166 694 aaKnown RBP28.14■■■□□ 2.1
LMNB2-206ENST00000534495 RIPK4P57078 832 aa28.14■■■□□ 2.1
LMNB2-206ENST00000534495 TGFB2P61812 414 aa28.14■■■□□ 2.1
LMNB2-206ENST00000534495 SCN7AQ01118 1682 aa28.13■■■□□ 2.09
LMNB2-206ENST00000534495 ZNF316A6NFI3 1004 aaPredicted RBP28.13■■■□□ 2.09
LMNB2-206ENST00000534495 BRCA1P38398 1863 aaKnown RBP28.12■■■□□ 2.09
LMNB2-206ENST00000534495 NRXN2Q9P2S2 1712 aa28.12■■■□□ 2.09
LMNB2-206ENST00000534495 LAMB4A4D0S4 1761 aa28.12■■■□□ 2.09
LMNB2-206ENST00000534495 NFIXQ14938 502 aa28.12■■■□□ 2.09
LMNB2-206ENST00000534495 ADAMTS8Q9UP79 889 aa28.12■■■□□ 2.09
LMNB2-206ENST00000534495 CCDC146Q8IYE0 955 aa28.11■■■□□ 2.09
LMNB2-206ENST00000534495 ZNF330Q9Y3S2 320 aaPredicted RBP28.11■■■□□ 2.09
LMNB2-206ENST00000534495 RUNDC1Q96C34 613 aa28.1■■■□□ 2.09
LMNB2-206ENST00000534495 A0A0G2JLW4 131 aa28.09■■■□□ 2.09
LMNB2-206ENST00000534495 WWC3Q9ULE0 1092 aa28.09■■■□□ 2.09
LMNB2-206ENST00000534495 TBC1D2BQ9UPU7 963 aa28.09■■■□□ 2.09
LMNB2-206ENST00000534495 BCORQ6W2J9 1755 aa28.09■■■□□ 2.09
LMNB2-206ENST00000534495 PIP4K2AP48426 406 aaPredicted RBP28.08■■■□□ 2.09
LMNB2-206ENST00000534495 EIF4A1P60842 406 aaKnown RBP28.08■■■□□ 2.09
LMNB2-206ENST00000534495 LMOD3Q0VAK6 560 aa28.08■■■□□ 2.09
LMNB2-206ENST00000534495 NPM2Q86SE8 214 aaKnown RBP28.07■■■□□ 2.08
LMNB2-206ENST00000534495 GIGYF1O75420 1035 aaPredicted RBP28.06■■■□□ 2.08
LMNB2-206ENST00000534495 DPEP1P16444 411 aa28.06■■■□□ 2.08
LMNB2-206ENST00000534495 RRP7AQ9Y3A4 280 aaKnown RBP28.06■■■□□ 2.08
LMNB2-206ENST00000534495 NBPF26B4DH59 902 aa28.05■■■□□ 2.08
LMNB2-206ENST00000534495 CAMTA2O94983 1202 aa28.05■■■□□ 2.08
LMNB2-206ENST00000534495 NBPF10Q6P3W6 841 aaKnown RBP28.05■■■□□ 2.08
LMNB2-206ENST00000534495 NBPF15Q8N660 670 aa28.05■■■□□ 2.08
LMNB2-206ENST00000534495 KCNA3P22001 575 aa28.04■■■□□ 2.08
LMNB2-206ENST00000534495 NEUROD2Q15784 382 aa28.04■■■□□ 2.08
LMNB2-206ENST00000534495 DZIP3Q86Y13 1208 aaKnown RBP28.04■■■□□ 2.08
LMNB2-206ENST00000534495 SERPINB2P05120 415 aa28.03■■■□□ 2.08
LMNB2-206ENST00000534495 TBC1D9BQ66K14 1250 aa28.03■■■□□ 2.08
LMNB2-206ENST00000534495 BABAM1Q9NWV8 329 aa28.03■■■□□ 2.08
LMNB2-206ENST00000534495 BICDL1Q6ZP65 573 aa28.02■■■□□ 2.08
LMNB2-206ENST00000534495 ZNF784Q8NCA9 323 aaPredicted RBP28.02■■■□□ 2.08
LMNB2-206ENST00000534495 TSPYL4Q9UJ04 414 aa28.02■■■□□ 2.08
LMNB2-206ENST00000534495 TRIM35Q9UPQ4 493 aa28.02■■■□□ 2.08
LMNB2-206ENST00000534495 ARFGEF1Q9Y6D6 1849 aa28.02■■■□□ 2.08
LMNB2-206ENST00000534495 BCS1LQ9Y276 419 aa27.99■■■□□ 2.07
LMNB2-206ENST00000534495 DLEC1Q9Y238 1755 aa27.98■■■□□ 2.07
LMNB2-206ENST00000534495 ANKRD31Q8N7Z5 1873 aa27.98■■■□□ 2.07
LMNB2-206ENST00000534495 CHRNA5P30532 468 aa27.97■■■□□ 2.07
LMNB2-206ENST00000534495 CCDC184Q52MB2 194 aa27.97■■■□□ 2.07
LMNB2-206ENST00000534495 CLEC4GQ6UXB4 293 aa27.97■■■□□ 2.07
LMNB2-206ENST00000534495 PIM2Q9P1W9 311 aa27.97■■■□□ 2.07
LMNB2-206ENST00000534495 CARMIL3Q8ND23 1372 aa27.97■■■□□ 2.07
LMNB2-206ENST00000534495 RGL2O15211 777 aa27.95■■■□□ 2.06
LMNB2-206ENST00000534495 SETDB2Q96T68 719 aa27.95■■■□□ 2.06
LMNB2-206ENST00000534495 CHL1O00533 1208 aa27.94■■■□□ 2.06
LMNB2-206ENST00000534495 NUP98P52948 1817 aa27.93■■■□□ 2.06
LMNB2-206ENST00000534495 ZNF652Q9Y2D9 606 aa27.93■■■□□ 2.06
LMNB2-206ENST00000534495 APAF1O14727 1248 aa27.92■■■□□ 2.06
LMNB2-206ENST00000534495 PRR5LQ6MZQ0 368 aa27.92■■■□□ 2.06
LMNB2-206ENST00000534495 ERBB4Q15303 1308 aa27.92■■■□□ 2.06
LMNB2-206ENST00000534495 DALRD3Q5D0E6 543 aaKnown RBP27.91■■■□□ 2.06
LMNB2-206ENST00000534495 ANP32CO43423 234 aa27.9■■■□□ 2.06
LMNB2-206ENST00000534495 NGEFQ8N5V2 710 aa27.89■■■□□ 2.06
LMNB2-206ENST00000534495 BRIP1Q9BX63 1249 aa27.89■■■□□ 2.06
LMNB2-206ENST00000534495 ADCY9O60503 1353 aa27.88■■■□□ 2.05
LMNB2-206ENST00000534495 MYL6BP14649 208 aa27.88■■■□□ 2.05
LMNB2-206ENST00000534495 HLFQ16534 295 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms