RNA–Protein interactions for RNA: ENST00000534336.1

MALAT1-202, metastasis associated lung adenocarcinoma transcript 1, humanhuman

BASIC

Gene MALAT1, Length 8,708 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-202ENST00000534336 DBN1Q16643 649 aa10.65□□□□□ -0.7
MALAT1-202ENST00000534336 IFT74Q96LB3 600 aa10.65□□□□□ -0.7
MALAT1-202ENST00000534336 PAXBP1Q9Y5B6 917 aa10.65□□□□□ -0.7
MALAT1-202ENST00000534336 CEP128Q6ZU80 1094 aa10.65□□□□□ -0.7
MALAT1-202ENST00000534336 PRDM10Q9NQV6 1147 aa10.65□□□□□ -0.7
MALAT1-202ENST00000534336 SSBP05455 408 aaKnown RBP eCLIP10.65□□□□□ -0.71
MALAT1-202ENST00000534336 LMNTD2Q8IXW0 634 aa10.65□□□□□ -0.71
MALAT1-202ENST00000534336 CCDC89Q8N998 374 aa10.65□□□□□ -0.71
MALAT1-202ENST00000534336 KIF20AO95235 890 aa10.64□□□□□ -0.71
MALAT1-202ENST00000534336 PHLDB2Q86SQ0 1253 aa10.64□□□□□ -0.71
MALAT1-202ENST00000534336 PDCD7Q8N8D1 485 aaKnown RBP10.64□□□□□ -0.71
MALAT1-202ENST00000534336 PRPHP41219 470 aa10.64□□□□□ -0.71
MALAT1-202ENST00000534336 OTUD6BQ8N6M0 293 aa10.64□□□□□ -0.71
MALAT1-202ENST00000534336 UBTFL1P0CB47 393 aaPredicted RBP10.64□□□□□ -0.71
MALAT1-202ENST00000534336 TOP1P11387 765 aaKnown RBP10.64□□□□□ -0.71
MALAT1-202ENST00000534336 CCDC63Q8NA47 563 aa10.64□□□□□ -0.71
MALAT1-202ENST00000534336 SIN3AQ96ST3 1273 aa10.64□□□□□ -0.71
MALAT1-202ENST00000534336 TXNDC16Q9P2K2 825 aa10.64□□□□□ -0.71
MALAT1-202ENST00000534336 ERCC6Q03468 1493 aa10.64□□□□□ -0.71
MALAT1-202ENST00000534336 TTC39AQ5SRH9 613 aa10.64□□□□□ -0.71
MALAT1-202ENST00000534336 MLECQ14165 292 aa10.64□□□□□ -0.71
MALAT1-202ENST00000534336 NBPF1Q3BBV0 1214 aa10.64□□□□□ -0.71
MALAT1-202ENST00000534336 WDHD1O75717 1129 aaPredicted RBP10.63□□□□□ -0.71
MALAT1-202ENST00000534336 YEATS4O95619 227 aa10.63□□□□□ -0.71
MALAT1-202ENST00000534336 ATP2A2P16615 1042 aaKnown RBP10.63□□□□□ -0.71
MALAT1-202ENST00000534336 DNAJC8O75937 253 aaPredicted RBP10.63□□□□□ -0.71
MALAT1-202ENST00000534336 PHAXQ9H814 394 aaKnown RBP10.63□□□□□ -0.71
MALAT1-202ENST00000534336 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.63□□□□□ -0.71
MALAT1-202ENST00000534336 ESPNB1AK53 854 aa10.63□□□□□ -0.71
MALAT1-202ENST00000534336 TRPC3Q13507 836 aa10.63□□□□□ -0.71
MALAT1-202ENST00000534336 SF3B2Q13435 895 aaKnown RBP10.63□□□□□ -0.71
MALAT1-202ENST00000534336 TBC1D5Q92609 795 aa10.63□□□□□ -0.71
MALAT1-202ENST00000534336 MIER3Q7Z3K6 550 aa10.63□□□□□ -0.71
MALAT1-202ENST00000534336 TRIM63Q969Q1 353 aa10.63□□□□□ -0.71
MALAT1-202ENST00000534336 MKL2Q9ULH7 1088 aa10.63□□□□□ -0.71
MALAT1-202ENST00000534336 PPP4R3BQ5MIZ7 849 aa10.63□□□□□ -0.71
MALAT1-202ENST00000534336 PRPF4BQ13523 1007 aaKnown RBP10.63□□□□□ -0.71
MALAT1-202ENST00000534336 VPS52Q8N1B4 723 aa10.63□□□□□ -0.71
MALAT1-202ENST00000534336 GOLGA1Q92805 767 aa10.63□□□□□ -0.71
MALAT1-202ENST00000534336 INPP1P49441 399 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 ARFGAP3Q9NP61 516 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 JADE2Q9NQC1 790 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 KDM4AO75164 1064 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 NEK4P51957 841 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 ZSCAN30Q86W11 494 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.62□□□□□ -0.71
MALAT1-202ENST00000534336 CCT6BQ92526 530 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 EHMT1Q9H9B1 1298 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 TACC3Q9Y6A5 838 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 ZNF365Q70YC5 407 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 KLHL34Q8N239 644 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 AFAP1L2Q8N4X5 818 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 CCDC77Q9BR77 488 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 PLIN1O60240 522 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 URI1O94763 535 aaPredicted RBP10.62□□□□□ -0.71
MALAT1-202ENST00000534336 PRKRIP1Q9H875 184 aaPredicted RBP10.62□□□□□ -0.71
MALAT1-202ENST00000534336 POLE3Q9NRF9 147 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 SMG6Q86US8 1419 aaKnown RBP10.62□□□□□ -0.71
MALAT1-202ENST00000534336 CTAGE5O15320 804 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 UIMC1Q96RL1 719 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 ANKRD12Q6UB98 2062 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 LARP1BQ659C4 914 aaKnown RBP10.62□□□□□ -0.71
MALAT1-202ENST00000534336 STXBP4Q6ZWJ1 553 aa10.62□□□□□ -0.71
MALAT1-202ENST00000534336 EIF2AQ9BY44 585 aaKnown RBP10.61□□□□□ -0.71
MALAT1-202ENST00000534336 WDR70Q9NW82 654 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 MIA2Q96PC5 1412 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 EVC2Q86UK5 1308 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 CRCPO75575 148 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 ATP5DP30049 168 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 TSNAXIP1Q2TAA8 658 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 PSPC1Q8WXF1 523 aaKnown RBP10.61□□□□□ -0.71
MALAT1-202ENST00000534336 TBC1D31Q96DN5 1066 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 SYNCQ9H7C4 482 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 VCX3AQ9NNX9 186 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 CCDC129Q6ZRS4 1044 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 KRT222Q8N1A0 295 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 PFDN4Q9NQP4 134 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 GIMAP4Q9NUV9 329 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 B4GALNT4Q76KP1 1039 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 EBAG9O00559 213 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 ANO10Q9NW15 660 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 COG6Q9Y2V7 657 aa10.61□□□□□ -0.71
MALAT1-202ENST00000534336 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.61□□□□□ -0.71not detected■■■□□ 17
MALAT1-202ENST00000534336 FMNL3Q8IVF7 1028 aa10.6□□□□□ -0.71
MALAT1-202ENST00000534336 SATB2Q9UPW6 733 aa10.6□□□□□ -0.71
MALAT1-202ENST00000534336 NOP2P46087 812 aaKnown RBP10.6□□□□□ -0.71
MALAT1-202ENST00000534336 MICALL1Q8N3F8 863 aa10.6□□□□□ -0.71
MALAT1-202ENST00000534336 CCDC171Q6TFL3 1326 aa10.6□□□□□ -0.71
MALAT1-202ENST00000534336 CUL4BQ13620 913 aa10.6□□□□□ -0.71
MALAT1-202ENST00000534336 PDCD2Q16342 344 aaPredicted RBP10.6□□□□□ -0.71
MALAT1-202ENST00000534336 TMEM266Q2M3C6 531 aa10.6□□□□□ -0.71
MALAT1-202ENST00000534336 PYM1Q9BRP8 204 aaKnown RBP10.6□□□□□ -0.71
MALAT1-202ENST00000534336 PCK1P35558 622 aa10.6□□□□□ -0.71
MALAT1-202ENST00000534336 IRX4P78413 519 aa10.6□□□□□ -0.71
MALAT1-202ENST00000534336 CEP85LQ5SZL2 805 aa10.6□□□□□ -0.71
MALAT1-202ENST00000534336 DACT3Q96B18 629 aaPredicted RBP10.6□□□□□ -0.71
MALAT1-202ENST00000534336 SAMD15Q9P1V8 674 aa10.6□□□□□ -0.71
MALAT1-202ENST00000534336 RRP7AQ9Y3A4 280 aaKnown RBP10.6□□□□□ -0.71
MALAT1-202ENST00000534336 TAOK1Q7L7X3 1001 aa10.6□□□□□ -0.71
MALAT1-202ENST00000534336 CCDC82Q8N4S0 544 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms