RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.58	■■■□□ 2.81
RELA-223	ENST00000534283	PRKAR2B	P31323	418 aa		32.57	■■■□□ 2.8
RELA-223	ENST00000534283	ZNF790	Q6PG37	636 aa		32.57	■■■□□ 2.8
RELA-223	ENST00000534283	CEMIP	Q8WUJ3	1361 aa		32.57	■■■□□ 2.8
RELA-223	ENST00000534283	TEF	Q10587	303 aa		32.56	■■■□□ 2.8
RELA-223	ENST00000534283	TTC5	Q8N0Z6	440 aa		32.56	■■■□□ 2.8
RELA-223	ENST00000534283	COL15A1	P39059	1388 aa		32.56	■■■□□ 2.8
RELA-223	ENST00000534283	FCHSD2	O94868	740 aa		32.55	■■■□□ 2.8
RELA-223	ENST00000534283	NFIX	Q14938	502 aa		32.55	■■■□□ 2.8
RELA-223	ENST00000534283	STARD3NL	O95772	234 aa		32.54	■■■□□ 2.8
RELA-223	ENST00000534283	EIF5	P55010	431 aa	Known RBP	32.54	■■■□□ 2.8
RELA-223	ENST00000534283	ZNF526	Q8TF50	670 aa	Predicted RBP	32.54	■■■□□ 2.8
RELA-223	ENST00000534283	CANX	P27824	592 aa	Known RBP	32.53	■■■□□ 2.8
RELA-223	ENST00000534283	PIM2	Q9P1W9	311 aa		32.53	■■■□□ 2.8
RELA-223	ENST00000534283	ARHGAP27	Q6ZUM4	889 aa		32.52	■■■□□ 2.8
RELA-223	ENST00000534283	NUDC	Q9Y266	331 aa		32.52	■■■□□ 2.8
RELA-223	ENST00000534283	HEG1	Q9ULI3	1381 aa		32.52	■■■□□ 2.8
RELA-223	ENST00000534283	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.5	■■■□□ 2.79
RELA-223	ENST00000534283	CHRNA5	P30532	468 aa		32.5	■■■□□ 2.79
RELA-223	ENST00000534283	KCNQ3	O43525	872 aa		32.49	■■■□□ 2.79
RELA-223	ENST00000534283	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.49	■■■□□ 2.79
RELA-223	ENST00000534283	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.49	■■■□□ 2.79
RELA-223	ENST00000534283	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.49	■■■□□ 2.79
RELA-223	ENST00000534283	DALRD3	Q5D0E6	543 aa	Known RBP	32.48	■■■□□ 2.79
RELA-223	ENST00000534283	UBR2	Q8IWV8	1755 aa		32.47	■■■□□ 2.79
RELA-223	ENST00000534283	FMNL2	Q96PY5	1086 aa		32.46	■■■□□ 2.79
RELA-223	ENST00000534283	KIF3C	O14782	793 aa		32.45	■■■□□ 2.79
RELA-223	ENST00000534283	SERPINB2	P05120	415 aa		32.45	■■■□□ 2.79
RELA-223	ENST00000534283		A0A087WZG4	1122 aa		32.44	■■■□□ 2.78
RELA-223	ENST00000534283	BTBD11	A6QL63	1104 aa		32.44	■■■□□ 2.78
RELA-223	ENST00000534283	A1BG	P04217	495 aa		32.42	■■■□□ 2.78
RELA-223	ENST00000534283	IL6ST	P40189	918 aa	Predicted RBP	32.41	■■■□□ 2.78
RELA-223	ENST00000534283	MCM10	Q7L590	875 aa		32.4	■■■□□ 2.78
RELA-223	ENST00000534283	C9orf131	Q5VYM1	1079 aa		32.39	■■■□□ 2.78
RELA-223	ENST00000534283	VIRMA	Q69YN4	1812 aa	Known RBP	32.39	■■■□□ 2.78
RELA-223	ENST00000534283	BRCA1	P38398	1863 aa	Known RBP	32.38	■■■□□ 2.77
RELA-223	ENST00000534283	SIPA1L3	O60292	1781 aa	Predicted RBP	32.38	■■■□□ 2.77
RELA-223	ENST00000534283	HTATSF1	O43719	755 aa	Known RBP	32.38	■■■□□ 2.77
RELA-223	ENST00000534283	TBC1D9B	Q66K14	1250 aa		32.38	■■■□□ 2.77
RELA-223	ENST00000534283	TBC1D2B	Q9UPU7	963 aa		32.38	■■■□□ 2.77
RELA-223	ENST00000534283	RTF1	Q92541	710 aa	Known RBP	32.37	■■■□□ 2.77
RELA-223	ENST00000534283	USP16	Q9Y5T5	823 aa		32.37	■■■□□ 2.77
RELA-223	ENST00000534283	DCTN1	Q14203	1278 aa		32.36	■■■□□ 2.77
RELA-223	ENST00000534283	BICDL1	Q6ZP65	573 aa		32.36	■■■□□ 2.77
RELA-223	ENST00000534283	PRAMEF22	A3QJZ6	481 aa		32.35	■■■□□ 2.77
RELA-223	ENST00000534283	NRXN2	Q9P2S2	1712 aa		32.34	■■■□□ 2.77
RELA-223	ENST00000534283	CARMIL3	Q8ND23	1372 aa		32.34	■■■□□ 2.77
RELA-223	ENST00000534283	CAMTA2	O94983	1202 aa		32.34	■■■□□ 2.77
RELA-223	ENST00000534283	C2CD5	Q86YS7	1000 aa		32.32	■■■□□ 2.76
RELA-223	ENST00000534283	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.32	■■■□□ 2.76
RELA-223	ENST00000534283	SNRPA1	P09661	255 aa	Known RBP	32.31	■■■□□ 2.76
RELA-223	ENST00000534283	HSPA6	P17066	643 aa		32.31	■■■□□ 2.76
RELA-223	ENST00000534283	PLEKHF1	Q96S99	279 aa		32.3	■■■□□ 2.76
RELA-223	ENST00000534283	NMRK2	Q9NPI5	230 aa		32.3	■■■□□ 2.76
RELA-223	ENST00000534283	TTLL6	Q8N841	843 aa		32.29	■■■□□ 2.76
RELA-223	ENST00000534283	BRIP1	Q9BX63	1249 aa		32.29	■■■□□ 2.76
RELA-223	ENST00000534283	ARFGEF1	Q9Y6D6	1849 aa		32.28	■■■□□ 2.76
RELA-223	ENST00000534283	CEP350	Q5VT06	3117 aa		32.28	■■■□□ 2.76
RELA-223	ENST00000534283		H0YIN7	160 aa		32.28	■■■□□ 2.76
RELA-223	ENST00000534283	PIP4K2A	P48426	406 aa	Predicted RBP	32.28	■■■□□ 2.76
RELA-223	ENST00000534283	TAF7	Q15545	349 aa	Predicted RBP	32.28	■■■□□ 2.76
RELA-223	ENST00000534283	PRR5L	Q6MZQ0	368 aa		32.28	■■■□□ 2.76
RELA-223	ENST00000534283	RNF181	Q9P0P0	153 aa		32.28	■■■□□ 2.76
RELA-223	ENST00000534283	PRELP	P51888	382 aa		32.26	■■■□□ 2.75
RELA-223	ENST00000534283	DZIP3	Q86Y13	1208 aa	Known RBP	32.26	■■■□□ 2.75
RELA-223	ENST00000534283	AFDN	P55196	1824 aa	Known RBP	32.26	■■■□□ 2.75
RELA-223	ENST00000534283	NBPF26	B4DH59	902 aa		32.25	■■■□□ 2.75
RELA-223	ENST00000534283	NBPF10	Q6P3W6	841 aa	Known RBP	32.25	■■■□□ 2.75
RELA-223	ENST00000534283	NBPF15	Q8N660	670 aa		32.25	■■■□□ 2.75
RELA-223	ENST00000534283	SETDB2	Q96T68	719 aa		32.25	■■■□□ 2.75
RELA-223	ENST00000534283	TOMM70	O94826	608 aa		32.24	■■■□□ 2.75
RELA-223	ENST00000534283	CCDC24	Q8N4L8	307 aa		32.24	■■■□□ 2.75
RELA-223	ENST00000534283	MIS18A	Q9NYP9	233 aa		32.24	■■■□□ 2.75
RELA-223	ENST00000534283	RASSF7	Q02833	373 aa		32.23	■■■□□ 2.75
RELA-223	ENST00000534283	NPM2	Q86SE8	214 aa	Known RBP	32.23	■■■□□ 2.75
RELA-223	ENST00000534283	PDZRN3	Q9UPQ7	1066 aa		32.23	■■■□□ 2.75
RELA-223	ENST00000534283	PDE6B	P35913	854 aa		32.22	■■■□□ 2.75
RELA-223	ENST00000534283	CLEC4G	Q6UXB4	293 aa		32.21	■■■□□ 2.75
RELA-223	ENST00000534283	SCN7A	Q01118	1682 aa		32.21	■■■□□ 2.75
RELA-223	ENST00000534283	NFKBIE	O00221	500 aa		32.19	■■■□□ 2.74
RELA-223	ENST00000534283	NFE2L2	Q16236	605 aa		32.19	■■■□□ 2.74
RELA-223	ENST00000534283	LMNB1	P20700	586 aa		32.18	■■■□□ 2.74
RELA-223	ENST00000534283	CNBD1	Q8NA66	436 aa		32.18	■■■□□ 2.74
RELA-223	ENST00000534283	RGL2	O15211	777 aa		32.17	■■■□□ 2.74
RELA-223	ENST00000534283	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.17	■■■□□ 2.74
RELA-223	ENST00000534283	KDM2B	Q8NHM5	1336 aa		32.17	■■■□□ 2.74
RELA-223	ENST00000534283	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.16	■■■□□ 2.74
RELA-223	ENST00000534283	NEFM	P07197	916 aa		32.15	■■■□□ 2.74
RELA-223	ENST00000534283	PNISR	Q8TF01	805 aa	Known RBP	32.15	■■■□□ 2.74
RELA-223	ENST00000534283	THUMPD2	Q9BTF0	503 aa	Known RBP	32.15	■■■□□ 2.74
RELA-223	ENST00000534283	RBM46	Q8TBY0	533 aa	Known RBP	32.14	■■■□□ 2.74
RELA-223	ENST00000534283	SRGN	P10124	158 aa		32.13	■■■□□ 2.73
RELA-223	ENST00000534283	EIF4A1	P60842	406 aa	Known RBP	32.13	■■■□□ 2.73
RELA-223	ENST00000534283	RRAGC	Q9HB90	399 aa		32.13	■■■□□ 2.73
RELA-223	ENST00000534283	DLEC1	Q9Y238	1755 aa		32.12	■■■□□ 2.73
RELA-223	ENST00000534283	ST5	P78524	1137 aa		32.12	■■■□□ 2.73
RELA-223	ENST00000534283	STYK1	Q6J9G0	422 aa		32.12	■■■□□ 2.73
RELA-223	ENST00000534283	PNN	Q9H307	717 aa	Known RBP	32.12	■■■□□ 2.73
RELA-223	ENST00000534283	ZNF652	Q9Y2D9	606 aa		32.12	■■■□□ 2.73
RELA-223	ENST00000534283	C21orf2	O43822	256 aa		32.11	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms