RNA–Protein interactions for RNA: ENST00000534267.5

CDKL1-209, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 2

Gene CDKL1, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-209ENST00000534267 EZH2Q15910 746 aaKnown RBP11.95□□□□□ -0.5
CDKL1-209ENST00000534267 KRT24Q2M2I5 525 aa11.95□□□□□ -0.5
CDKL1-209ENST00000534267 RC3H1Q5TC82 1133 aaKnown RBP11.95□□□□□ -0.5
CDKL1-209ENST00000534267 INTS5Q6P9B9 1019 aaKnown RBP11.95□□□□□ -0.5
CDKL1-209ENST00000534267 TSR2Q969E8 191 aaKnown RBP11.95□□□□□ -0.5
CDKL1-209ENST00000534267 USP16Q9Y5T5 823 aa11.95□□□□□ -0.5
CDKL1-209ENST00000534267 ITGB4P16144 1822 aa11.95□□□□□ -0.5
CDKL1-209ENST00000534267 SOS1Q07889 1333 aaPredicted RBP11.94□□□□□ -0.5
CDKL1-209ENST00000534267 PRAMEF22A3QJZ6 481 aa11.94□□□□□ -0.5
CDKL1-209ENST00000534267 VAMP4O75379 141 aa11.94□□□□□ -0.5
CDKL1-209ENST00000534267 KCNQ4P56696 695 aa11.94□□□□□ -0.5
CDKL1-209ENST00000534267 LRP10Q7Z4F1 713 aa11.94□□□□□ -0.5
CDKL1-209ENST00000534267 DNAJC10Q8IXB1 793 aa11.94□□□□□ -0.5
CDKL1-209ENST00000534267 TSPYL6Q8N831 410 aa11.94□□□□□ -0.5
CDKL1-209ENST00000534267 TEX13AQ9BXU3 409 aaPredicted RBP11.94□□□□□ -0.5
CDKL1-209ENST00000534267 MYH16Q9H6N6 1097 aa11.94□□□□□ -0.5
CDKL1-209ENST00000534267 SSUH2Q9Y2M2 353 aa11.94□□□□□ -0.5
CDKL1-209ENST00000534267 ATP6V1AP38606 617 aa11.93□□□□□ -0.5
CDKL1-209ENST00000534267 PDIA6Q15084 440 aa11.93□□□□□ -0.5
CDKL1-209ENST00000534267 TTC5Q8N0Z6 440 aa11.93□□□□□ -0.5
CDKL1-209ENST00000534267 LINC00116Q8NCU8 138 aa11.93□□□□□ -0.5
CDKL1-209ENST00000534267 CCNL1Q9UK58 526 aaPredicted RBP11.93□□□□□ -0.5
CDKL1-209ENST00000534267 TNS1Q9HBL0 1735 aaKnown RBP11.93□□□□□ -0.5
CDKL1-209ENST00000534267 PAPPAQ13219 1627 aa11.93□□□□□ -0.5
CDKL1-209ENST00000534267 BTAF1O14981 1849 aa11.93□□□□□ -0.5
CDKL1-209ENST00000534267 ZNF831Q5JPB2 1677 aa11.92□□□□□ -0.5
CDKL1-209ENST00000534267 NBPF26B4DH59 902 aa11.92□□□□□ -0.5
CDKL1-209ENST00000534267 HMGB2P26583 209 aaKnown RBP11.92□□□□□ -0.5
CDKL1-209ENST00000534267 SF3B2Q13435 895 aaKnown RBP11.92□□□□□ -0.5
CDKL1-209ENST00000534267 NBPF14Q5TI25 921 aa11.92□□□□□ -0.5
CDKL1-209ENST00000534267 NBPF10Q6P3W6 841 aaKnown RBP11.92□□□□□ -0.5
CDKL1-209ENST00000534267 NBPF15Q8N660 670 aa11.92□□□□□ -0.5
CDKL1-209ENST00000534267 CLEC11AQ9Y240 323 aa11.92□□□□□ -0.5
CDKL1-209ENST00000534267 LAS1LQ9Y4W2 734 aaKnown RBP11.92□□□□□ -0.5
CDKL1-209ENST00000534267 CNTNAP4Q9C0A0 1308 aa11.91□□□□□ -0.5
CDKL1-209ENST00000534267 EXOSC9Q06265 439 aaKnown RBP11.91□□□□□ -0.5
CDKL1-209ENST00000534267 AMIGO3Q86WK7 504 aa11.91□□□□□ -0.5
CDKL1-209ENST00000534267 KAT6BQ8WYB5 2073 aa11.91□□□□□ -0.5
CDKL1-209ENST00000534267 CICQ96RK0 1608 aaPredicted RBP11.9□□□□□ -0.5
CDKL1-209ENST00000534267 UBR2Q8IWV8 1755 aa11.9□□□□□ -0.5
CDKL1-209ENST00000534267 STARD3NLO95772 234 aa11.9□□□□□ -0.5
CDKL1-209ENST00000534267 CT47B1P0C2W7 299 aaPredicted RBP11.9□□□□□ -0.5
CDKL1-209ENST00000534267 FXR2P51116 673 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDKL1-209ENST00000534267 EIF5P55010 431 aaKnown RBP11.9□□□□□ -0.5
CDKL1-209ENST00000534267 KDM3BQ7LBC6 1761 aa11.9□□□□□ -0.51
CDKL1-209ENST00000534267 LY75O60449 1722 aa11.89□□□□□ -0.51
CDKL1-209ENST00000534267 RPS6KA4O75676 772 aa11.89□□□□□ -0.51
CDKL1-209ENST00000534267 A1BGP04217 495 aa11.89□□□□□ -0.51
CDKL1-209ENST00000534267 CRKLP46109 303 aaKnown RBP11.89□□□□□ -0.51
CDKL1-209ENST00000534267 ANO8Q9HCE9 1232 aaPredicted RBP11.89□□□□□ -0.51
CDKL1-209ENST00000534267 RGPD3A6NKT7 1758 aaPredicted RBP11.89□□□□□ -0.51
CDKL1-209ENST00000534267 RGPD4Q7Z3J3 1758 aa11.89□□□□□ -0.51
CDKL1-209ENST00000534267 ERBB4Q15303 1308 aa11.88□□□□□ -0.51
CDKL1-209ENST00000534267 BRPF1P55201 1214 aaPredicted RBP11.88□□□□□ -0.51
CDKL1-209ENST00000534267 ZNF827Q17R98 1081 aa11.88□□□□□ -0.51
CDKL1-209ENST00000534267 TWISTNBQ3B726 338 aaPredicted RBP11.88□□□□□ -0.51
CDKL1-209ENST00000534267 ZNF428Q96B54 188 aa11.88□□□□□ -0.51
CDKL1-209ENST00000534267 CCDC87Q9NVE4 849 aa11.88□□□□□ -0.51
CDKL1-209ENST00000534267 ELL2O00472 640 aaPredicted RBP11.87□□□□□ -0.51
CDKL1-209ENST00000534267 IL6STP40189 918 aaPredicted RBP11.87□□□□□ -0.51
CDKL1-209ENST00000534267 SLC15A2Q16348 729 aa11.87□□□□□ -0.51
CDKL1-209ENST00000534267 DDX21Q9NR30 783 aaKnown RBP eCLIP11.87□□□□□ -0.51
CDKL1-209ENST00000534267 PROSER3Q2NL68 480 aa11.86□□□□□ -0.51
CDKL1-209ENST00000534267 CHMP4AQ9BY43 222 aa11.86□□□□□ -0.51
CDKL1-209ENST00000534267 ZBTB1Q9Y2K1 713 aa11.86□□□□□ -0.51
CDKL1-209ENST00000534267 VIRMAQ69YN4 1812 aaKnown RBP11.86□□□□□ -0.51
CDKL1-209ENST00000534267 RGL2O15211 777 aa11.85□□□□□ -0.51
CDKL1-209ENST00000534267 DBF4Q9UBU7 674 aaPredicted RBP11.85□□□□□ -0.51
CDKL1-209ENST00000534267 SSFA2P28290 1259 aa11.84□□□□□ -0.51
CDKL1-209ENST00000534267 RARSP54136 660 aaKnown RBP11.84□□□□□ -0.51
CDKL1-209ENST00000534267 HDGFL1Q5TGJ6 251 aa11.84□□□□□ -0.51
CDKL1-209ENST00000534267 CCDC30Q5VVM6 783 aa11.84□□□□□ -0.51
CDKL1-209ENST00000534267 SPDYE1Q8NFV5 336 aaPredicted RBP11.84□□□□□ -0.51
CDKL1-209ENST00000534267 ARHGEF1Q92888 912 aaKnown RBP11.84□□□□□ -0.51
CDKL1-209ENST00000534267 C5P01031 1676 aa11.84□□□□□ -0.51
CDKL1-209ENST00000534267 PNPLA7Q6ZV29 1317 aa11.84□□□□□ -0.51
CDKL1-209ENST00000534267 TJP1Q07157 1748 aa11.83□□□□□ -0.52
CDKL1-209ENST00000534267 MYH14Q7Z406 1995 aaKnown RBP11.83□□□□□ -0.52
CDKL1-209ENST00000534267 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.83□□□□□ -0.52
CDKL1-209ENST00000534267 EIF2S2P20042 333 aaKnown RBP11.83□□□□□ -0.52
CDKL1-209ENST00000534267 ALDH1L2Q3SY69 923 aa11.83□□□□□ -0.52
CDKL1-209ENST00000534267 SMIM5Q71RC9 77 aa11.83□□□□□ -0.52
CDKL1-209ENST00000534267 COL23A1Q86Y22 540 aaPredicted RBP11.83□□□□□ -0.52
CDKL1-209ENST00000534267 SSH1Q8WYL5 1049 aa11.83□□□□□ -0.52
CDKL1-209ENST00000534267 CHPF2Q9P2E5 772 aa11.83□□□□□ -0.52
CDKL1-209ENST00000534267 RREB1Q92766 1687 aa11.82□□□□□ -0.52
CDKL1-209ENST00000534267 GNPATO15228 680 aa11.82□□□□□ -0.52
CDKL1-209ENST00000534267 CANXP27824 592 aaKnown RBP11.82□□□□□ -0.52
CDKL1-209ENST00000534267 MRPL50Q8N5N7 158 aaKnown RBP11.82□□□□□ -0.52
CDKL1-209ENST00000534267 FLAD1Q8NFF5 587 aa11.82□□□□□ -0.52
CDKL1-209ENST00000534267 YTHDC1Q96MU7 727 aaKnown RBP11.82□□□□□ -0.52
CDKL1-209ENST00000534267 PDGFDQ9GZP0 370 aaPredicted RBP11.82□□□□□ -0.52
CDKL1-209ENST00000534267 BCL2L12Q9HB09 334 aa11.82□□□□□ -0.52
CDKL1-209ENST00000534267 HYPKQ9NX55 129 aa11.82□□□□□ -0.52
CDKL1-209ENST00000534267 RTCBQ9Y3I0 505 aaKnown RBP11.82□□□□□ -0.52
CDKL1-209ENST00000534267 ERVV-1B6SEH8 477 aa11.81□□□□□ -0.52
CDKL1-209ENST00000534267 CAMTA2O94983 1202 aa11.81□□□□□ -0.52
CDKL1-209ENST00000534267 ANXA1P04083 346 aa11.81□□□□□ -0.52
CDKL1-209ENST00000534267 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
CDKL1-209ENST00000534267 TRAPPC3LQ5T215 181 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms