RNA–Protein interactions for RNA: ENST00000534189.1

CCDC180-213, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-213ENST00000534189 MRC1P22897 1456 aa21.69■■□□□ 1.06
CCDC180-213ENST00000534189 SLC39A6Q13433 755 aa21.68■■□□□ 1.06
CCDC180-213ENST00000534189 SMC1BQ8NDV3 1235 aa21.68■■□□□ 1.06
CCDC180-213ENST00000534189 IL17REQ8NFR9 667 aa21.68■■□□□ 1.06
CCDC180-213ENST00000534189 PHACTR3Q96KR7 559 aa21.68■■□□□ 1.06
CCDC180-213ENST00000534189 RRAGCQ9HB90 399 aa21.68■■□□□ 1.06
CCDC180-213ENST00000534189 DPEP1P16444 411 aa21.67■■□□□ 1.06
CCDC180-213ENST00000534189 RFC4P35249 363 aa21.67■■□□□ 1.06
CCDC180-213ENST00000534189 CRKLP46109 303 aaKnown RBP21.67■■□□□ 1.06
CCDC180-213ENST00000534189 DDX10Q13206 875 aaKnown RBP21.67■■□□□ 1.06
CCDC180-213ENST00000534189 ARHGEF1Q92888 912 aaKnown RBP21.67■■□□□ 1.06
CCDC180-213ENST00000534189 ADAMTS7Q9UKP4 1686 aa21.66■■□□□ 1.06
CCDC180-213ENST00000534189 RALBP1Q15311 655 aa21.66■■□□□ 1.06
CCDC180-213ENST00000534189 TTC5Q8N0Z6 440 aa21.66■■□□□ 1.06
CCDC180-213ENST00000534189 NLGN1Q8N2Q7 840 aa21.66■■□□□ 1.06
CCDC180-213ENST00000534189 BRCA1P38398 1863 aaKnown RBP21.66■■□□□ 1.06
CCDC180-213ENST00000534189 COL5A3P25940 1745 aaPredicted RBP21.66■■□□□ 1.06
CCDC180-213ENST00000534189 NEFMP07197 916 aa21.65■■□□□ 1.06
CCDC180-213ENST00000534189 KCNA3P22001 575 aa21.65■■□□□ 1.06
CCDC180-213ENST00000534189 DNAJC10Q8IXB1 793 aa21.65■■□□□ 1.06
CCDC180-213ENST00000534189 VSIG10Q8N0Z9 540 aa21.65■■□□□ 1.06
CCDC180-213ENST00000534189 VIRMAQ69YN4 1812 aaKnown RBP21.64■■□□□ 1.06
CCDC180-213ENST00000534189 RTF1Q92541 710 aaKnown RBP21.64■■□□□ 1.05
CCDC180-213ENST00000534189 TNRC6CQ9HCJ0 1690 aaKnown RBP21.63■■□□□ 1.05
CCDC180-213ENST00000534189 INTS5Q6P9B9 1019 aaKnown RBP21.62■■□□□ 1.05
CCDC180-213ENST00000534189 CCDC87Q9NVE4 849 aa21.62■■□□□ 1.05
CCDC180-213ENST00000534189 ARFGEF1Q9Y6D6 1849 aa21.62■■□□□ 1.05
CCDC180-213ENST00000534189 CYP19A1P11511 503 aaPredicted RBP21.61■■□□□ 1.05
CCDC180-213ENST00000534189 ZEB1P37275 1124 aaPredicted RBP21.61■■□□□ 1.05
CCDC180-213ENST00000534189 ZNF790Q6PG37 636 aa21.61■■□□□ 1.05
CCDC180-213ENST00000534189 PNNQ9H307 717 aaKnown RBP21.61■■□□□ 1.05
CCDC180-213ENST00000534189 MYH14Q7Z406 1995 aaKnown RBP21.61■■□□□ 1.05
CCDC180-213ENST00000534189 TJP1Q07157 1748 aa21.6■■□□□ 1.05
CCDC180-213ENST00000534189 HTATSF1O43719 755 aaKnown RBP21.6■■□□□ 1.05
CCDC180-213ENST00000534189 RNF181Q9P0P0 153 aa21.6■■□□□ 1.05
CCDC180-213ENST00000534189 CEMIPQ8WUJ3 1361 aa21.6■■□□□ 1.05
CCDC180-213ENST00000534189 STARD3NLO95772 234 aa21.59■■□□□ 1.05
CCDC180-213ENST00000534189 GYS1P13807 737 aa21.59■■□□□ 1.05
CCDC180-213ENST00000534189 TEX13AQ9BXU3 409 aaPredicted RBP21.59■■□□□ 1.05
CCDC180-213ENST00000534189 BTBD11A6QL63 1104 aa21.58■■□□□ 1.05
CCDC180-213ENST00000534189 PIM2Q9P1W9 311 aa21.58■■□□□ 1.05
CCDC180-213ENST00000534189 ZNF496Q96IT1 587 aaPredicted RBP21.57■■□□□ 1.04
CCDC180-213ENST00000534189 FMNL2Q96PY5 1086 aa21.57■■□□□ 1.04
CCDC180-213ENST00000534189 PCDH10Q9P2E7 1040 aa21.57■■□□□ 1.04
CCDC180-213ENST00000534189 PARP3Q9Y6F1 533 aa21.57■■□□□ 1.04
CCDC180-213ENST00000534189 C4AP0C0L4 1744 aa21.57■■□□□ 1.04
CCDC180-213ENST00000534189 ZPR1O75312 459 aa21.56■■□□□ 1.04
CCDC180-213ENST00000534189 HEG1Q9ULI3 1381 aa21.56■■□□□ 1.04
CCDC180-213ENST00000534189 SOS1Q07889 1333 aaPredicted RBP21.55■■□□□ 1.04
CCDC180-213ENST00000534189 USP42Q9H9J4 1324 aaKnown RBP21.55■■□□□ 1.04
CCDC180-213ENST00000534189 MCM10Q7L590 875 aa21.55■■□□□ 1.04
CCDC180-213ENST00000534189 SRP68Q9UHB9 627 aaKnown RBP21.55■■□□□ 1.04
CCDC180-213ENST00000534189 ZBTB1Q9Y2K1 713 aa21.55■■□□□ 1.04
CCDC180-213ENST00000534189 DALRD3Q5D0E6 543 aaKnown RBP21.54■■□□□ 1.04
CCDC180-213ENST00000534189 SBF1O95248 1867 aa21.54■■□□□ 1.04
CCDC180-213ENST00000534189 MYBBP1AQ9BQG0 1328 aaKnown RBP21.54■■□□□ 1.04
CCDC180-213ENST00000534189 MAPK8IP3Q9UPT6 1336 aa21.54■■□□□ 1.04
CCDC180-213ENST00000534189 ZC3H4Q9UPT8 1303 aaKnown RBP21.54■■□□□ 1.04
CCDC180-213ENST00000534189 UBR2Q8IWV8 1755 aa21.53■■□□□ 1.04
CCDC180-213ENST00000534189 CANXP27824 592 aaKnown RBP21.53■■□□□ 1.04
CCDC180-213ENST00000534189 SIPA1L3O60292 1781 aaPredicted RBP21.53■■□□□ 1.04
CCDC180-213ENST00000534189 VEGFAP15692 232 aaPredicted RBP21.52■■□□□ 1.04
CCDC180-213ENST00000534189 DCTN1Q14203 1278 aa21.52■■□□□ 1.04
CCDC180-213ENST00000534189 FKBP8Q14318 412 aa21.52■■□□□ 1.04
CCDC180-213ENST00000534189 PLEKHF1Q96S99 279 aa21.52■■□□□ 1.04
CCDC180-213ENST00000534189 NARFQ9UHQ1 456 aa21.52■■□□□ 1.04
CCDC180-213ENST00000534189 TAF7Q15545 349 aaPredicted RBP21.51■■□□□ 1.03
CCDC180-213ENST00000534189 COL15A1P39059 1388 aa21.5■■□□□ 1.03
CCDC180-213ENST00000534189 A0A087WZG4 1122 aa21.5■■□□□ 1.03
CCDC180-213ENST00000534189 KCNQ3O43525 872 aa21.5■■□□□ 1.03
CCDC180-213ENST00000534189 NFE2L2Q16236 605 aa21.5■■□□□ 1.03
CCDC180-213ENST00000534189 USPL1Q5W0Q7 1092 aa21.5■■□□□ 1.03
CCDC180-213ENST00000534189 NPM2Q86SE8 214 aaKnown RBP21.5■■□□□ 1.03
CCDC180-213ENST00000534189 PRDM10Q9NQV6 1147 aa21.5■■□□□ 1.03
CCDC180-213ENST00000534189 GLTPD2A6NH11 291 aa21.49■■□□□ 1.03
CCDC180-213ENST00000534189 EIF5P55010 431 aaKnown RBP21.48■■□□□ 1.03
CCDC180-213ENST00000534189 FOXN1O15353 648 aa21.47■■□□□ 1.03
CCDC180-213ENST00000534189 SNRPA1P09661 255 aaKnown RBP21.47■■□□□ 1.03
CCDC180-213ENST00000534189 TM4SF1P30408 202 aa21.47■■□□□ 1.03
CCDC180-213ENST00000534189 IL6STP40189 918 aaPredicted RBP21.47■■□□□ 1.03
CCDC180-213ENST00000534189 PNISRQ8TF01 805 aaKnown RBP21.47■■□□□ 1.03
CCDC180-213ENST00000534189 POTECB2RU33 542 aa21.45■■□□□ 1.02
CCDC180-213ENST00000534189 A1BGP04217 495 aa21.45■■□□□ 1.02
CCDC180-213ENST00000534189 DDR1Q08345 913 aa21.45■■□□□ 1.02
CCDC180-213ENST00000534189 ZNF330Q9Y3S2 320 aaPredicted RBP21.45■■□□□ 1.02
CCDC180-213ENST00000534189 CHRNA5P30532 468 aa21.44■■□□□ 1.02
CCDC180-213ENST00000534189 PRKRIP1Q9H875 184 aaPredicted RBP21.44■■□□□ 1.02
CCDC180-213ENST00000534189 CREBZFQ9NS37 354 aa21.44■■□□□ 1.02
CCDC180-213ENST00000534189 USP16Q9Y5T5 823 aa21.44■■□□□ 1.02
CCDC180-213ENST00000534189 POLRMTO00411 1230 aaKnown RBP21.43■■□□□ 1.02
CCDC180-213ENST00000534189 RASSF7Q02833 373 aa21.43■■□□□ 1.02
CCDC180-213ENST00000534189 NFIXQ14938 502 aa21.43■■□□□ 1.02
CCDC180-213ENST00000534189 WDR43Q15061 677 aaKnown RBP eCLIP21.43■■□□□ 1.02
CCDC180-213ENST00000534189 BCL2L12Q9HB09 334 aa21.43■■□□□ 1.02
CCDC180-213ENST00000534189 MIS18AQ9NYP9 233 aa21.43■■□□□ 1.02
CCDC180-213ENST00000534189 LMNB1P20700 586 aa21.42■■□□□ 1.02
CCDC180-213ENST00000534189 RIPK4P57078 832 aa21.42■■□□□ 1.02
CCDC180-213ENST00000534189 FAM161AQ3B820 660 aa21.41■■□□□ 1.02
CCDC180-213ENST00000534189 MKRN1Q9UHC7 482 aaKnown RBP21.41■■□□□ 1.02
CCDC180-213ENST00000534189 TBC1D2BQ9UPU7 963 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms