RNA–Protein interactions for RNA: ENST00000534145.1

SIGIRR-221, Transcript of single Ig and TIR domain containing, humanhuman

TSL 2

Gene SIGIRR, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGIRR-221ENST00000534145 ZNF316A6NFI3 1004 aaPredicted RBP31.71■■■□□ 2.67
SIGIRR-221ENST00000534145 SRP68Q9UHB9 627 aaKnown RBP31.71■■■□□ 2.67
SIGIRR-221ENST00000534145 SOS1Q07889 1333 aaPredicted RBP31.71■■■□□ 2.67
SIGIRR-221ENST00000534145 CANXP27824 592 aaKnown RBP31.7■■■□□ 2.67
SIGIRR-221ENST00000534145 WDR43Q15061 677 aaKnown RBP eCLIP31.7■■■□□ 2.67
SIGIRR-221ENST00000534145 ZPR1O75312 459 aa31.69■■■□□ 2.66
SIGIRR-221ENST00000534145 TAF7Q15545 349 aaPredicted RBP31.69■■■□□ 2.66
SIGIRR-221ENST00000534145 USP42Q9H9J4 1324 aaKnown RBP31.69■■■□□ 2.66
SIGIRR-221ENST00000534145 COL15A1P39059 1388 aa31.67■■■□□ 2.66
SIGIRR-221ENST00000534145 PARP3Q9Y6F1 533 aa31.66■■■□□ 2.66
SIGIRR-221ENST00000534145 USPL1Q5W0Q7 1092 aa31.65■■■□□ 2.66
SIGIRR-221ENST00000534145 KIF13BQ9NQT8 1826 aa31.65■■■□□ 2.66
SIGIRR-221ENST00000534145 KDM3BQ7LBC6 1761 aa31.64■■■□□ 2.66
SIGIRR-221ENST00000534145 YY1P25490 414 aa31.64■■■□□ 2.66
SIGIRR-221ENST00000534145 FKBP8Q14318 412 aa31.64■■■□□ 2.66
SIGIRR-221ENST00000534145 MIS18AQ9NYP9 233 aa31.64■■■□□ 2.66
SIGIRR-221ENST00000534145 RIPK4P57078 832 aa31.63■■■□□ 2.65
SIGIRR-221ENST00000534145 CCDC146Q8IYE0 955 aa31.63■■■□□ 2.65
SIGIRR-221ENST00000534145 THUMPD2Q9BTF0 503 aaKnown RBP31.63■■■□□ 2.65
SIGIRR-221ENST00000534145 PNISRQ8TF01 805 aaKnown RBP31.62■■■□□ 2.65
SIGIRR-221ENST00000534145 NARFQ9UHQ1 456 aa31.62■■■□□ 2.65
SIGIRR-221ENST00000534145 ZNF330Q9Y3S2 320 aaPredicted RBP31.62■■■□□ 2.65
SIGIRR-221ENST00000534145 SNRPA1P09661 255 aaKnown RBP31.61■■■□□ 2.65
SIGIRR-221ENST00000534145 N4BP2Q86UW6 1770 aaPredicted RBP31.61■■■□□ 2.65
SIGIRR-221ENST00000534145 A1BGP04217 495 aa31.6■■■□□ 2.65
SIGIRR-221ENST00000534145 USP16Q9Y5T5 823 aa31.6■■■□□ 2.65
SIGIRR-221ENST00000534145 A0A087WZG4 1122 aa31.59■■■□□ 2.65
SIGIRR-221ENST00000534145 TMPOP42166 694 aaKnown RBP31.59■■■□□ 2.65
SIGIRR-221ENST00000534145 EIF5P55010 431 aaKnown RBP31.59■■■□□ 2.65
SIGIRR-221ENST00000534145 NPM2Q86SE8 214 aaKnown RBP31.59■■■□□ 2.65
SIGIRR-221ENST00000534145 ADAMTS8Q9UP79 889 aa31.59■■■□□ 2.65
SIGIRR-221ENST00000534145 PRAMEF22A3QJZ6 481 aa31.58■■■□□ 2.65
SIGIRR-221ENST00000534145 RUNDC1Q96C34 613 aa31.58■■■□□ 2.65
SIGIRR-221ENST00000534145 IL6STP40189 918 aaPredicted RBP31.57■■■□□ 2.64
SIGIRR-221ENST00000534145 AFDNP55196 1824 aaKnown RBP31.56■■■□□ 2.64
SIGIRR-221ENST00000534145 LAMB4A4D0S4 1761 aa31.56■■■□□ 2.64
SIGIRR-221ENST00000534145 LMOD3Q0VAK6 560 aa31.56■■■□□ 2.64
SIGIRR-221ENST00000534145 NEUROD2Q15784 382 aa31.56■■■□□ 2.64
SIGIRR-221ENST00000534145 RRP7AQ9Y3A4 280 aaKnown RBP31.56■■■□□ 2.64
SIGIRR-221ENST00000534145 YBX3P16989 372 aaKnown RBP eCLIP31.55■■■□□ 2.64
SIGIRR-221ENST00000534145 TM4SF1P30408 202 aa31.54■■■□□ 2.64
SIGIRR-221ENST00000534145 UTRNP46939 3433 aa31.53■■■□□ 2.64
SIGIRR-221ENST00000534145 KIAA1551Q9HCM1 1747 aa31.53■■■□□ 2.64
SIGIRR-221ENST00000534145 C10orf71Q711Q0 1435 aa31.53■■■□□ 2.64
SIGIRR-221ENST00000534145 GRIN3BO60391 1043 aa31.53■■■□□ 2.64
SIGIRR-221ENST00000534145 DDR1Q08345 913 aa31.53■■■□□ 2.64
SIGIRR-221ENST00000534145 WWC3Q9ULE0 1092 aa31.53■■■□□ 2.64
SIGIRR-221ENST00000534145 PIP4K2AP48426 406 aaPredicted RBP31.52■■■□□ 2.64
SIGIRR-221ENST00000534145 BCL2L12Q9HB09 334 aa31.52■■■□□ 2.64
SIGIRR-221ENST00000534145 TBC1D2BQ9UPU7 963 aa31.52■■■□□ 2.64
SIGIRR-221ENST00000534145 SCN7AQ01118 1682 aa31.51■■■□□ 2.64
SIGIRR-221ENST00000534145 POLRMTO00411 1230 aaKnown RBP31.51■■■□□ 2.63
SIGIRR-221ENST00000534145 TGFB2P61812 414 aa31.51■■■□□ 2.63
SIGIRR-221ENST00000534145 NFIXQ14938 502 aa31.5■■■□□ 2.63
SIGIRR-221ENST00000534145 GOLGB1Q14789 3259 aaKnown RBP31.5■■■□□ 2.63
SIGIRR-221ENST00000534145 TSPYL4Q9UJ04 414 aa31.49■■■□□ 2.63
SIGIRR-221ENST00000534145 BCORQ6W2J9 1755 aa31.48■■■□□ 2.63
SIGIRR-221ENST00000534145 PXDNLA1KZ92 1463 aa31.48■■■□□ 2.63
SIGIRR-221ENST00000534145 EIF4A1P60842 406 aaKnown RBP31.48■■■□□ 2.63
SIGIRR-221ENST00000534145 A0A0G2JLW4 131 aa31.47■■■□□ 2.63
SIGIRR-221ENST00000534145 BICDL1Q6ZP65 573 aa31.47■■■□□ 2.63
SIGIRR-221ENST00000534145 DZIP3Q86Y13 1208 aaKnown RBP31.47■■■□□ 2.63
SIGIRR-221ENST00000534145 ANP32CO43423 234 aa31.46■■■□□ 2.63
SIGIRR-221ENST00000534145 NRXN2Q9P2S2 1712 aa31.46■■■□□ 2.63
SIGIRR-221ENST00000534145 BRCA1P38398 1863 aaKnown RBP31.46■■■□□ 2.63
SIGIRR-221ENST00000534145 GIGYF1O75420 1035 aaPredicted RBP31.45■■■□□ 2.63
SIGIRR-221ENST00000534145 SERPINB2P05120 415 aa31.44■■■□□ 2.62
SIGIRR-221ENST00000534145 DPEP1P16444 411 aa31.43■■■□□ 2.62
SIGIRR-221ENST00000534145 TBC1D9BQ66K14 1250 aa31.43■■■□□ 2.62
SIGIRR-221ENST00000534145 NBPF26B4DH59 902 aa31.42■■■□□ 2.62
SIGIRR-221ENST00000534145 CCDC184Q52MB2 194 aa31.42■■■□□ 2.62
SIGIRR-221ENST00000534145 NBPF10Q6P3W6 841 aaKnown RBP31.42■■■□□ 2.62
SIGIRR-221ENST00000534145 NBPF15Q8N660 670 aa31.42■■■□□ 2.62
SIGIRR-221ENST00000534145 BABAM1Q9NWV8 329 aa31.42■■■□□ 2.62
SIGIRR-221ENST00000534145 TRIM35Q9UPQ4 493 aa31.42■■■□□ 2.62
SIGIRR-221ENST00000534145 CAMTA2O94983 1202 aa31.41■■■□□ 2.62
SIGIRR-221ENST00000534145 LAS1LQ9Y4W2 734 aaKnown RBP31.41■■■□□ 2.62
SIGIRR-221ENST00000534145 BCS1LQ9Y276 419 aa31.39■■■□□ 2.62
SIGIRR-221ENST00000534145 APAF1O14727 1248 aa31.38■■■□□ 2.61
SIGIRR-221ENST00000534145 NGEFQ8N5V2 710 aa31.37■■■□□ 2.61
SIGIRR-221ENST00000534145 SETDB2Q96T68 719 aa31.37■■■□□ 2.61
SIGIRR-221ENST00000534145 ARFGEF1Q9Y6D6 1849 aa31.37■■■□□ 2.61
SIGIRR-221ENST00000534145 ZNF652Q9Y2D9 606 aa31.36■■■□□ 2.61
SIGIRR-221ENST00000534145 CARMIL3Q8ND23 1372 aa31.35■■■□□ 2.61
SIGIRR-221ENST00000534145 PIM2Q9P1W9 311 aa31.35■■■□□ 2.61
SIGIRR-221ENST00000534145 NUP98P52948 1817 aa31.35■■■□□ 2.61
SIGIRR-221ENST00000534145 MYL6BP14649 208 aa31.34■■■□□ 2.61
SIGIRR-221ENST00000534145 KCNA3P22001 575 aa31.34■■■□□ 2.61
SIGIRR-221ENST00000534145 CHRNA5P30532 468 aa31.34■■■□□ 2.61
SIGIRR-221ENST00000534145 MRS2Q9HD23 443 aa31.34■■■□□ 2.61
SIGIRR-221ENST00000534145 NPHP1O15259 732 aa31.33■■■□□ 2.61
SIGIRR-221ENST00000534145 CLEC4GQ6UXB4 293 aa31.33■■■□□ 2.61
SIGIRR-221ENST00000534145 ANKRD31Q8N7Z5 1873 aa31.33■■■□□ 2.61
SIGIRR-221ENST00000534145 CHL1O00533 1208 aa31.32■■■□□ 2.6
SIGIRR-221ENST00000534145 EIF2S2P20042 333 aaKnown RBP31.32■■■□□ 2.6
SIGIRR-221ENST00000534145 DLEC1Q9Y238 1755 aa31.32■■■□□ 2.6
SIGIRR-221ENST00000534145 ZNF784Q8NCA9 323 aaPredicted RBP31.3■■■□□ 2.6
SIGIRR-221ENST00000534145 ERBB4Q15303 1308 aa31.28■■■□□ 2.6
SIGIRR-221ENST00000534145 DALRD3Q5D0E6 543 aaKnown RBP31.28■■■□□ 2.6
SIGIRR-221ENST00000534145 PRR5LQ6MZQ0 368 aa31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms