RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 GPBP1L1Q9HC44 474 aaPredicted RBP5□□□□□ -1.61
CHMP4A-208ENST00000534106 CYLDQ9NQC7 956 aa5□□□□□ -1.61
CHMP4A-208ENST00000534106 ENAMQ9NRM1 1142 aa5□□□□□ -1.61
CHMP4A-208ENST00000534106 CDK13Q14004 1512 aaKnown RBP5□□□□□ -1.61
CHMP4A-208ENST00000534106 SHANK2Q9UPX8 1470 aa5□□□□□ -1.61
CHMP4A-208ENST00000534106 ALKQ9UM73 1620 aa4.99□□□□□ -1.61
CHMP4A-208ENST00000534106 MEN1O00255 615 aa4.99□□□□□ -1.61
CHMP4A-208ENST00000534106 SLURP2P0DP57 97 aa4.99□□□□□ -1.61
CHMP4A-208ENST00000534106 FOXD4L5Q5VV16 416 aaPredicted RBP4.99□□□□□ -1.61
CHMP4A-208ENST00000534106 KANK3Q6NY19 840 aa4.99□□□□□ -1.61
CHMP4A-208ENST00000534106 LYPD4Q6UWN0 246 aa4.99□□□□□ -1.61
CHMP4A-208ENST00000534106 RIPOR1Q6ZS17 1223 aa4.99□□□□□ -1.61
CHMP4A-208ENST00000534106 ANKLE2Q86XL3 938 aa4.99□□□□□ -1.61
CHMP4A-208ENST00000534106 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.99□□□□□ -1.61
CHMP4A-208ENST00000534106 TCOF1Q13428 1488 aaKnown RBP4.99□□□□□ -1.61
CHMP4A-208ENST00000534106 PTPRKQ15262 1439 aa4.98□□□□□ -1.61
CHMP4A-208ENST00000534106 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
CHMP4A-208ENST00000534106 ATP5J2-PTCD1G3V325 749 aa4.98□□□□□ -1.61
CHMP4A-208ENST00000534106 LILRA1O75019 489 aa4.98□□□□□ -1.61
CHMP4A-208ENST00000534106 ARHGEF15O94989 841 aa4.98□□□□□ -1.61
CHMP4A-208ENST00000534106 SRSF11Q05519 484 aaKnown RBP4.98□□□□□ -1.61
CHMP4A-208ENST00000534106 SLC27A3Q5K4L6 730 aa4.98□□□□□ -1.61
CHMP4A-208ENST00000534106 NEDD1Q8NHV4 660 aa4.98□□□□□ -1.61
CHMP4A-208ENST00000534106 GAS2L1Q99501 681 aaPredicted RBP4.98□□□□□ -1.61
CHMP4A-208ENST00000534106 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
CHMP4A-208ENST00000534106 HMX1Q9NP08 348 aaPredicted RBP4.98□□□□□ -1.61
CHMP4A-208ENST00000534106 PCDHB9Q9Y5E1 797 aa4.98□□□□□ -1.61
CHMP4A-208ENST00000534106 DNMT3AQ9Y6K1 912 aaPredicted RBP4.98□□□□□ -1.61
CHMP4A-208ENST00000534106 C3P01024 1663 aa4.98□□□□□ -1.61
CHMP4A-208ENST00000534106 NPATQ14207 1427 aa4.97□□□□□ -1.61
CHMP4A-208ENST00000534106 DIP2CQ9Y2E4 1556 aa4.97□□□□□ -1.61
CHMP4A-208ENST00000534106 ZNF518AQ6AHZ1 1483 aa4.97□□□□□ -1.61
CHMP4A-208ENST00000534106 MLH3Q9UHC1 1453 aa4.97□□□□□ -1.61
CHMP4A-208ENST00000534106 SENP3-EIF4A1A0A087X0R7 540 aa4.97□□□□□ -1.61
CHMP4A-208ENST00000534106 GPR25O00155 361 aa4.97□□□□□ -1.61
CHMP4A-208ENST00000534106 CELA2BP08218 269 aaPredicted RBP4.97□□□□□ -1.61
CHMP4A-208ENST00000534106 RFC5P40937 340 aa4.97□□□□□ -1.61
CHMP4A-208ENST00000534106 SEPT12Q8IYM1 358 aa4.97□□□□□ -1.61
CHMP4A-208ENST00000534106 NLRP3Q96P20 1036 aa4.97□□□□□ -1.61
CHMP4A-208ENST00000534106 CNTLNQ9NXG0 1405 aa4.97□□□□□ -1.61
CHMP4A-208ENST00000534106 SPAG9O60271 1321 aaKnown RBP4.97□□□□□ -1.61
CHMP4A-208ENST00000534106 ESPNB1AK53 854 aa4.96□□□□□ -1.62
CHMP4A-208ENST00000534106 H7C1W4 665 aa4.96□□□□□ -1.62
CHMP4A-208ENST00000534106 GIGYF1O75420 1035 aaPredicted RBP4.96□□□□□ -1.62
CHMP4A-208ENST00000534106 IGHA1P01876 353 aa4.96□□□□□ -1.62
CHMP4A-208ENST00000534106 RNF144AP50876 292 aaPredicted RBP4.96□□□□□ -1.62
CHMP4A-208ENST00000534106 FOXK2Q01167 660 aa4.96□□□□□ -1.62
CHMP4A-208ENST00000534106 PODNQ7Z5L7 613 aa4.96□□□□□ -1.62
CHMP4A-208ENST00000534106 PCMTD1Q96MG8 357 aaPredicted RBP4.96□□□□□ -1.62
CHMP4A-208ENST00000534106 MBIPQ9NS73 344 aa4.96□□□□□ -1.62
CHMP4A-208ENST00000534106 CUEDC1Q9NWM3 386 aaPredicted RBP4.96□□□□□ -1.62
CHMP4A-208ENST00000534106 CDK11AQ9UQ88 783 aaPredicted RBP4.96□□□□□ -1.62
CHMP4A-208ENST00000534106 ARHGAP5Q13017 1502 aa4.96□□□□□ -1.62
CHMP4A-208ENST00000534106 CTTNBP2Q8WZ74 1663 aa4.96□□□□□ -1.62
CHMP4A-208ENST00000534106 SAMD9Q5K651 1589 aa4.95□□□□□ -1.62
CHMP4A-208ENST00000534106 PLA2R1Q13018 1463 aa4.95□□□□□ -1.62
CHMP4A-208ENST00000534106 ZBBXA8MT70 800 aa4.95□□□□□ -1.62
CHMP4A-208ENST00000534106 PHF20L1A8MW92 1017 aa4.95□□□□□ -1.62
CHMP4A-208ENST00000534106 THEMISQ8N1K5 641 aaPredicted RBP4.95□□□□□ -1.62
CHMP4A-208ENST00000534106 ZNF837Q96EG3 531 aaPredicted RBP4.95□□□□□ -1.62
CHMP4A-208ENST00000534106 GMCL1Q96IK5 515 aa4.95□□□□□ -1.62
CHMP4A-208ENST00000534106 TRERF1Q96PN7 1200 aa4.95□□□□□ -1.62
CHMP4A-208ENST00000534106 AGLP35573 1532 aa4.95□□□□□ -1.62
CHMP4A-208ENST00000534106 ZNF644Q9H582 1327 aaPredicted RBP4.95□□□□□ -1.62
CHMP4A-208ENST00000534106 ABCA6Q8N139 1617 aa4.94□□□□□ -1.62
CHMP4A-208ENST00000534106 LRRC7Q96NW7 1537 aa4.94□□□□□ -1.62
CHMP4A-208ENST00000534106 LTKP29376 864 aa4.94□□□□□ -1.62
CHMP4A-208ENST00000534106 POU4F2Q12837 409 aa4.94□□□□□ -1.62
CHMP4A-208ENST00000534106 TMEM259Q4ZIN3 620 aa4.94□□□□□ -1.62
CHMP4A-208ENST00000534106 RNF20Q5VTR2 975 aa4.94□□□□□ -1.62
CHMP4A-208ENST00000534106 CC2D2BQ6DHV5 1058 aa4.94□□□□□ -1.62
CHMP4A-208ENST00000534106 TRIM22Q8IYM9 498 aa4.94□□□□□ -1.62
CHMP4A-208ENST00000534106 KDF1Q8NAX2 398 aaPredicted RBP4.94□□□□□ -1.62
CHMP4A-208ENST00000534106 GTPBP3Q969Y2 492 aaKnown RBP4.94□□□□□ -1.62
CHMP4A-208ENST00000534106 NSFL1CQ9UNZ2 370 aaKnown RBP4.94□□□□□ -1.62
CHMP4A-208ENST00000534106 ZNF330Q9Y3S2 320 aaPredicted RBP4.94□□□□□ -1.62
CHMP4A-208ENST00000534106 NPHP4O75161 1426 aaPredicted RBP4.94□□□□□ -1.62
CHMP4A-208ENST00000534106 KDM5CP41229 1560 aa4.94□□□□□ -1.62
CHMP4A-208ENST00000534106 CFAP74Q9C0B2 1584 aa4.94□□□□□ -1.62
CHMP4A-208ENST00000534106 TNRQ92752 1358 aa4.93□□□□□ -1.62
CHMP4A-208ENST00000534106 CPS1P31327 1500 aa4.93□□□□□ -1.62
CHMP4A-208ENST00000534106 A0A1W2PRU2 124 aa4.93□□□□□ -1.62
CHMP4A-208ENST00000534106 KIF3BO15066 747 aa4.93□□□□□ -1.62
CHMP4A-208ENST00000534106 UBTFP17480 764 aaKnown RBP4.93□□□□□ -1.62
CHMP4A-208ENST00000534106 GPC1P35052 558 aa4.93□□□□□ -1.62
CHMP4A-208ENST00000534106 TROQ12816 1431 aaPredicted RBP4.93□□□□□ -1.62
CHMP4A-208ENST00000534106 GAS6Q14393 721 aa4.93□□□□□ -1.62
CHMP4A-208ENST00000534106 DBN1Q16643 649 aa4.93□□□□□ -1.62
CHMP4A-208ENST00000534106 CCDC125Q86Z20 511 aa4.93□□□□□ -1.62
CHMP4A-208ENST00000534106 VWDEQ8N2E2 1590 aa4.93□□□□□ -1.62
CHMP4A-208ENST00000534106 BEND7Q8N7W2 519 aaPredicted RBP4.93□□□□□ -1.62
CHMP4A-208ENST00000534106 KIF14Q15058 1648 aa4.93□□□□□ -1.62
CHMP4A-208ENST00000534106 A2ML1A8K2U0 1454 aa4.93□□□□□ -1.62
CHMP4A-208ENST00000534106 CNTNAP5Q8WYK1 1306 aa4.93□□□□□ -1.62
CHMP4A-208ENST00000534106 CEP170BQ9Y4F5 1589 aaPredicted RBP4.92□□□□□ -1.62
CHMP4A-208ENST00000534106 BCRP11274 1271 aa4.92□□□□□ -1.62
CHMP4A-208ENST00000534106 MX2P20592 715 aa4.92□□□□□ -1.62
CHMP4A-208ENST00000534106 CYP2U1Q7Z449 544 aa4.92□□□□□ -1.62
CHMP4A-208ENST00000534106 TXNDC2Q86VQ3 553 aa4.92□□□□□ -1.62
CHMP4A-208ENST00000534106 ZNF592Q92610 1267 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms