RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 POLD1P28340 1107 aa12.96□□□□□ -0.33
LDLRAD3-206ENST00000534091 RARSP54136 660 aaKnown RBP12.96□□□□□ -0.33
LDLRAD3-206ENST00000534091 EXOSC9Q06265 439 aaKnown RBP12.96□□□□□ -0.33
LDLRAD3-206ENST00000534091 DCTN1Q14203 1278 aa12.96□□□□□ -0.33
LDLRAD3-206ENST00000534091 MCM10Q7L590 875 aa12.96□□□□□ -0.33
LDLRAD3-206ENST00000534091 VSIG10Q8N0Z9 540 aa12.96□□□□□ -0.33
LDLRAD3-206ENST00000534091 MBIPQ9NS73 344 aa12.96□□□□□ -0.33
LDLRAD3-206ENST00000534091 COL5A3P25940 1745 aaPredicted RBP12.96□□□□□ -0.34
LDLRAD3-206ENST00000534091 KCNQ4P56696 695 aa12.95□□□□□ -0.34
LDLRAD3-206ENST00000534091 PDGFDQ9GZP0 370 aaPredicted RBP12.95□□□□□ -0.34
LDLRAD3-206ENST00000534091 BRPF1P55201 1214 aaPredicted RBP12.94□□□□□ -0.34
LDLRAD3-206ENST00000534091 ALDH1L2Q3SY69 923 aa12.94□□□□□ -0.34
LDLRAD3-206ENST00000534091 IL17REQ8NFR9 667 aa12.94□□□□□ -0.34
LDLRAD3-206ENST00000534091 SOS1Q07889 1333 aaPredicted RBP12.93□□□□□ -0.34
LDLRAD3-206ENST00000534091 DCAF8L1A6NGE4 600 aa12.93□□□□□ -0.34
LDLRAD3-206ENST00000534091 TEFQ10587 303 aa12.93□□□□□ -0.34
LDLRAD3-206ENST00000534091 ITPK1Q13572 414 aa12.93□□□□□ -0.34
LDLRAD3-206ENST00000534091 COL23A1Q86Y22 540 aaPredicted RBP12.93□□□□□ -0.34
LDLRAD3-206ENST00000534091 LINC00116Q8NCU8 138 aa12.93□□□□□ -0.34
LDLRAD3-206ENST00000534091 ARXQ96QS3 562 aa12.93□□□□□ -0.34
LDLRAD3-206ENST00000534091 RBM42Q9BTD8 480 aaKnown RBP12.93□□□□□ -0.34
LDLRAD3-206ENST00000534091 LGR6Q9HBX8 967 aa12.93□□□□□ -0.34
LDLRAD3-206ENST00000534091 ATF5Q9Y2D1 282 aaPredicted RBP12.93□□□□□ -0.34
LDLRAD3-206ENST00000534091 UBR2Q8IWV8 1755 aa12.92□□□□□ -0.34
LDLRAD3-206ENST00000534091 RPS6KA4O75676 772 aa12.92□□□□□ -0.34
LDLRAD3-206ENST00000534091 TEX13AQ9BXU3 409 aaPredicted RBP12.92□□□□□ -0.34
LDLRAD3-206ENST00000534091 PPP4R2Q9NY27 417 aa12.92□□□□□ -0.34
LDLRAD3-206ENST00000534091 RTCBQ9Y3I0 505 aaKnown RBP12.92□□□□□ -0.34
LDLRAD3-206ENST00000534091 LAS1LQ9Y4W2 734 aaKnown RBP12.92□□□□□ -0.34
LDLRAD3-206ENST00000534091 SRCAPQ6ZRS2 3230 aa12.91□□□□□ -0.34
LDLRAD3-206ENST00000534091 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.91□□□□□ -0.34
LDLRAD3-206ENST00000534091 VAMP4O75379 141 aa12.91□□□□□ -0.34
LDLRAD3-206ENST00000534091 BCAR3O75815 825 aa12.91□□□□□ -0.34
LDLRAD3-206ENST00000534091 IRX6P78412 446 aaPredicted RBP12.91□□□□□ -0.34
LDLRAD3-206ENST00000534091 PDE3AQ14432 1141 aa12.91□□□□□ -0.34
LDLRAD3-206ENST00000534091 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
LDLRAD3-206ENST00000534091 SLC4A9Q96Q91 983 aa12.91□□□□□ -0.34
LDLRAD3-206ENST00000534091 GNPATO15228 680 aa12.9□□□□□ -0.34
LDLRAD3-206ENST00000534091 TWISTNBQ3B726 338 aaPredicted RBP12.9□□□□□ -0.34
LDLRAD3-206ENST00000534091 TRAPPC3LQ5T215 181 aa12.9□□□□□ -0.34
LDLRAD3-206ENST00000534091 TTC5Q8N0Z6 440 aa12.9□□□□□ -0.34
LDLRAD3-206ENST00000534091 TSPYL4Q9UJ04 414 aa12.9□□□□□ -0.34
LDLRAD3-206ENST00000534091 TJP1Q07157 1748 aa12.9□□□□□ -0.34
LDLRAD3-206ENST00000534091 KIF16BQ96L93 1317 aa12.89□□□□□ -0.35
LDLRAD3-206ENST00000534091 KCPQ6ZWJ8 1503 aa12.89□□□□□ -0.35
LDLRAD3-206ENST00000534091 MYH14Q7Z406 1995 aaKnown RBP12.89□□□□□ -0.35
LDLRAD3-206ENST00000534091 MSH5O43196 834 aa12.89□□□□□ -0.35
LDLRAD3-206ENST00000534091 PTCD1O75127 700 aaKnown RBP12.89□□□□□ -0.35
LDLRAD3-206ENST00000534091 ZNF790Q6PG37 636 aa12.89□□□□□ -0.35
LDLRAD3-206ENST00000534091 SSH1Q8WYL5 1049 aa12.89□□□□□ -0.35
LDLRAD3-206ENST00000534091 PLIN1O60240 522 aa12.88□□□□□ -0.35
LDLRAD3-206ENST00000534091 MS4A1P11836 297 aa12.88□□□□□ -0.35
LDLRAD3-206ENST00000534091 NLGN1Q8N2Q7 840 aa12.88□□□□□ -0.35
LDLRAD3-206ENST00000534091 TSPYL6Q8N831 410 aa12.88□□□□□ -0.35
LDLRAD3-206ENST00000534091 SYT17Q9BSW7 474 aa12.88□□□□□ -0.35
LDLRAD3-206ENST00000534091 SMC4Q9NTJ3 1288 aa12.88□□□□□ -0.35
LDLRAD3-206ENST00000534091 STARD3NLO95772 234 aa12.87□□□□□ -0.35
LDLRAD3-206ENST00000534091 CRKLP46109 303 aaKnown RBP12.87□□□□□ -0.35
LDLRAD3-206ENST00000534091 ZKSCAN2Q63HK3 967 aa12.87□□□□□ -0.35
LDLRAD3-206ENST00000534091 C8orf58Q8NAV2 365 aa12.87□□□□□ -0.35
LDLRAD3-206ENST00000534091 FMNL2Q96PY5 1086 aa12.87□□□□□ -0.35
LDLRAD3-206ENST00000534091 FHDC1Q9C0D6 1143 aaPredicted RBP12.87□□□□□ -0.35
LDLRAD3-206ENST00000534091 N4BP2Q86UW6 1770 aaPredicted RBP12.86□□□□□ -0.35
LDLRAD3-206ENST00000534091 HEG1Q9ULI3 1381 aa12.86□□□□□ -0.35
LDLRAD3-206ENST00000534091 BTBD11A6QL63 1104 aa12.86□□□□□ -0.35
LDLRAD3-206ENST00000534091 HOXB7P09629 217 aa12.86□□□□□ -0.35
LDLRAD3-206ENST00000534091 RFC4P35249 363 aa12.86□□□□□ -0.35
LDLRAD3-206ENST00000534091 MRPL50Q8N5N7 158 aaKnown RBP12.86□□□□□ -0.35
LDLRAD3-206ENST00000534091 ARHGAP45Q92619 1136 aa12.86□□□□□ -0.35
LDLRAD3-206ENST00000534091 CCDC87Q9NVE4 849 aa12.86□□□□□ -0.35
LDLRAD3-206ENST00000534091 CD2APQ9Y5K6 639 aa12.86□□□□□ -0.35
LDLRAD3-206ENST00000534091 IPO8O15397 1037 aaKnown RBP12.85□□□□□ -0.35
LDLRAD3-206ENST00000534091 PHF14O94880 888 aa12.85□□□□□ -0.35
LDLRAD3-206ENST00000534091 CYP19A1P11511 503 aaPredicted RBP12.85□□□□□ -0.35
LDLRAD3-206ENST00000534091 CANXP27824 592 aaKnown RBP12.85□□□□□ -0.35
LDLRAD3-206ENST00000534091 SLC39A6Q13433 755 aa12.85□□□□□ -0.35
LDLRAD3-206ENST00000534091 AAMPQ13685 434 aa12.85□□□□□ -0.35
LDLRAD3-206ENST00000534091 C20orf194Q5TEA3 1177 aa12.85□□□□□ -0.35
LDLRAD3-206ENST00000534091 EXOC6Q8TAG9 804 aa12.85□□□□□ -0.35
LDLRAD3-206ENST00000534091 ARHGEF1Q92888 912 aaKnown RBP12.85□□□□□ -0.35
LDLRAD3-206ENST00000534091 CRBNQ96SW2 442 aa12.85□□□□□ -0.35
LDLRAD3-206ENST00000534091 C4AP0C0L4 1744 aa12.85□□□□□ -0.35
LDLRAD3-206ENST00000534091 LAMB4A4D0S4 1761 aa12.84□□□□□ -0.35
LDLRAD3-206ENST00000534091 INTS5Q6P9B9 1019 aaKnown RBP12.84□□□□□ -0.35
LDLRAD3-206ENST00000534091 DNAJC10Q8IXB1 793 aa12.84□□□□□ -0.35
LDLRAD3-206ENST00000534091 BCL2L13Q9BXK5 485 aa12.84□□□□□ -0.35
LDLRAD3-206ENST00000534091 CHMP4AQ9BY43 222 aa12.84□□□□□ -0.35
LDLRAD3-206ENST00000534091 A0A087WZG4 1122 aa12.83□□□□□ -0.36
LDLRAD3-206ENST00000534091 ATF7IPQ6VMQ6 1270 aa12.83□□□□□ -0.36
LDLRAD3-206ENST00000534091 AMIGO3Q86WK7 504 aa12.83□□□□□ -0.36
LDLRAD3-206ENST00000534091 ZNF496Q96IT1 587 aaPredicted RBP12.83□□□□□ -0.36
LDLRAD3-206ENST00000534091 MIS18AQ9NYP9 233 aa12.83□□□□□ -0.36
LDLRAD3-206ENST00000534091 USP42Q9H9J4 1324 aaKnown RBP12.83□□□□□ -0.36
LDLRAD3-206ENST00000534091 RGL2O15211 777 aa12.82□□□□□ -0.36
LDLRAD3-206ENST00000534091 TRIM27P14373 513 aa12.82□□□□□ -0.36
LDLRAD3-206ENST00000534091 EIF4A1P60842 406 aaKnown RBP12.82□□□□□ -0.36
LDLRAD3-206ENST00000534091 KRT24Q2M2I5 525 aa12.82□□□□□ -0.36
LDLRAD3-206ENST00000534091 FRAT1Q92837 279 aaPredicted RBP12.82□□□□□ -0.36
LDLRAD3-206ENST00000534091 NOB1Q9ULX3 412 aaKnown RBP12.82□□□□□ -0.36
LDLRAD3-206ENST00000534091 KIF13BQ9NQT8 1826 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms