RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 RASSF7Q02833 373 aa13.96□□□□□ -0.17
CLP1-206ENST00000533905 CCDC24Q8N4L8 307 aa13.96□□□□□ -0.17
CLP1-206ENST00000533905 CCDC87Q9NVE4 849 aa13.96□□□□□ -0.17
CLP1-206ENST00000533905 SIPA1L3O60292 1781 aaPredicted RBP13.96□□□□□ -0.18
CLP1-206ENST00000533905 COL15A1P39059 1388 aa13.96□□□□□ -0.18
CLP1-206ENST00000533905 TGFB2P61812 414 aa13.95□□□□□ -0.18
CLP1-206ENST00000533905 HTRA3P83110 453 aa13.95□□□□□ -0.18
CLP1-206ENST00000533905 NFIXQ14938 502 aa13.95□□□□□ -0.18
CLP1-206ENST00000533905 ARHGAP27Q6ZUM4 889 aa13.95□□□□□ -0.18
CLP1-206ENST00000533905 IL17REQ8NFR9 667 aa13.95□□□□□ -0.18
CLP1-206ENST00000533905 PARP3Q9Y6F1 533 aa13.95□□□□□ -0.18
CLP1-206ENST00000533905 PRAMEF22A3QJZ6 481 aa13.94□□□□□ -0.18
CLP1-206ENST00000533905 PHACTR3Q96KR7 559 aa13.94□□□□□ -0.18
CLP1-206ENST00000533905 ARFGEF1Q9Y6D6 1849 aa13.94□□□□□ -0.18
CLP1-206ENST00000533905 COL11A2P13942 1736 aaPredicted RBP13.93□□□□□ -0.18
CLP1-206ENST00000533905 DIAPH1O60610 1272 aaKnown RBP13.93□□□□□ -0.18
CLP1-206ENST00000533905 PIP4K2AP48426 406 aaPredicted RBP13.93□□□□□ -0.18
CLP1-206ENST00000533905 C9orf131Q5VYM1 1079 aa13.93□□□□□ -0.18
CLP1-206ENST00000533905 SCN7AQ01118 1682 aa13.92□□□□□ -0.18
CLP1-206ENST00000533905 HSPA6P17066 643 aa13.92□□□□□ -0.18
CLP1-206ENST00000533905 CANXP27824 592 aaKnown RBP13.92□□□□□ -0.18
CLP1-206ENST00000533905 ZNF496Q96IT1 587 aaPredicted RBP13.92□□□□□ -0.18
CLP1-206ENST00000533905 ANKRD31Q8N7Z5 1873 aa13.91□□□□□ -0.18
CLP1-206ENST00000533905 U2SURPO15042 1029 aaKnown RBP13.91□□□□□ -0.18
CLP1-206ENST00000533905 RSPH6AQ9H0K4 717 aa13.9□□□□□ -0.18
CLP1-206ENST00000533905 DLEC1Q9Y238 1755 aa13.89□□□□□ -0.19
CLP1-206ENST00000533905 TBC1D9BQ66K14 1250 aa13.89□□□□□ -0.19
CLP1-206ENST00000533905 BICDL1Q6ZP65 573 aa13.89□□□□□ -0.19
CLP1-206ENST00000533905 NARFQ9UHQ1 456 aa13.89□□□□□ -0.19
CLP1-206ENST00000533905 CEMIPQ8WUJ3 1361 aa13.88□□□□□ -0.19
CLP1-206ENST00000533905 NPC1L1Q9UHC9 1359 aa13.88□□□□□ -0.19
CLP1-206ENST00000533905 HEG1Q9ULI3 1381 aa13.88□□□□□ -0.19
CLP1-206ENST00000533905 A1BGP04217 495 aa13.88□□□□□ -0.19
CLP1-206ENST00000533905 EIF5P55010 431 aaKnown RBP13.88□□□□□ -0.19
CLP1-206ENST00000533905 DCTN1Q14203 1278 aa13.88□□□□□ -0.19
CLP1-206ENST00000533905 DALRD3Q5D0E6 543 aaKnown RBP13.88□□□□□ -0.19
CLP1-206ENST00000533905 SLC51AQ86UW1 340 aa13.88□□□□□ -0.19
CLP1-206ENST00000533905 RNF181Q9P0P0 153 aa13.88□□□□□ -0.19
CLP1-206ENST00000533905 PIM2Q9P1W9 311 aa13.88□□□□□ -0.19
CLP1-206ENST00000533905 NFKBIEO00221 500 aa13.87□□□□□ -0.19
CLP1-206ENST00000533905 SERPINB2P05120 415 aa13.87□□□□□ -0.19
CLP1-206ENST00000533905 PRKAR2BP31323 418 aa13.87□□□□□ -0.19
CLP1-206ENST00000533905 TBC1D2BQ9UPU7 963 aa13.87□□□□□ -0.19
CLP1-206ENST00000533905 SBF1O95248 1867 aa13.87□□□□□ -0.19
CLP1-206ENST00000533905 ZPR1O75312 459 aa13.86□□□□□ -0.19
CLP1-206ENST00000533905 HMGB2P26583 209 aaKnown RBP13.86□□□□□ -0.19
CLP1-206ENST00000533905 ZNF790Q6PG37 636 aa13.86□□□□□ -0.19
CLP1-206ENST00000533905 BCORQ6W2J9 1755 aa13.86□□□□□ -0.19
CLP1-206ENST00000533905 TIAM2Q8IVF5 1701 aa13.85□□□□□ -0.19
CLP1-206ENST00000533905 MCM10Q7L590 875 aa13.85□□□□□ -0.19
CLP1-206ENST00000533905 DNAJC5GQ8N7S2 189 aa13.85□□□□□ -0.19
CLP1-206ENST00000533905 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
CLP1-206ENST00000533905 ZNF330Q9Y3S2 320 aaPredicted RBP13.85□□□□□ -0.19
CLP1-206ENST00000533905 GNAT3A8MTJ3 354 aa13.84□□□□□ -0.19
CLP1-206ENST00000533905 CAMTA2O94983 1202 aa13.84□□□□□ -0.19
CLP1-206ENST00000533905 PPP2R1AP30153 589 aa13.84□□□□□ -0.19
CLP1-206ENST00000533905 VSIG10Q8N0Z9 540 aa13.84□□□□□ -0.19
CLP1-206ENST00000533905 RRAGCQ9HB90 399 aa13.84□□□□□ -0.19
CLP1-206ENST00000533905 USP16Q9Y5T5 823 aa13.84□□□□□ -0.19
CLP1-206ENST00000533905 WDR90Q96KV7 1748 aa13.84□□□□□ -0.19
CLP1-206ENST00000533905 PRR5LQ6MZQ0 368 aa13.83□□□□□ -0.2
CLP1-206ENST00000533905 C2CD5Q86YS7 1000 aa13.83□□□□□ -0.2
CLP1-206ENST00000533905 POTECB2RU33 542 aa13.82□□□□□ -0.2
CLP1-206ENST00000533905 TOMM70O94826 608 aa13.82□□□□□ -0.2
CLP1-206ENST00000533905 OLFM4Q6UX06 510 aa13.82□□□□□ -0.2
CLP1-206ENST00000533905 NBPF26B4DH59 902 aa13.81□□□□□ -0.2
CLP1-206ENST00000533905 TEFQ10587 303 aa13.81□□□□□ -0.2
CLP1-206ENST00000533905 NBPF10Q6P3W6 841 aaKnown RBP13.81□□□□□ -0.2
CLP1-206ENST00000533905 TTC5Q8N0Z6 440 aa13.81□□□□□ -0.2
CLP1-206ENST00000533905 NBPF15Q8N660 670 aa13.81□□□□□ -0.2
CLP1-206ENST00000533905 MIS18AQ9NYP9 233 aa13.81□□□□□ -0.2
CLP1-206ENST00000533905 TNRC6CQ9HCJ0 1690 aaKnown RBP13.81□□□□□ -0.2
CLP1-206ENST00000533905 GAS2L2Q8NHY3 880 aa13.8□□□□□ -0.2
CLP1-206ENST00000533905 SLX4Q8IY92 1834 aa13.79□□□□□ -0.2
CLP1-206ENST00000533905 CACNA1SQ13698 1873 aa13.79□□□□□ -0.2
CLP1-206ENST00000533905 BTBD11A6QL63 1104 aa13.79□□□□□ -0.2
CLP1-206ENST00000533905 POTEIP0CG38 1075 aa13.79□□□□□ -0.2
CLP1-206ENST00000533905 POTEJP0CG39 1038 aa13.79□□□□□ -0.2
CLP1-206ENST00000533905 IFFO2Q5TF58 517 aa13.79□□□□□ -0.2
CLP1-206ENST00000533905 THUMPD2Q9BTF0 503 aaKnown RBP13.79□□□□□ -0.2
CLP1-206ENST00000533905 C21orf2O43822 256 aa13.78□□□□□ -0.2
CLP1-206ENST00000533905 IL6STP40189 918 aaPredicted RBP13.78□□□□□ -0.2
CLP1-206ENST00000533905 TTLL6Q8N841 843 aa13.78□□□□□ -0.2
CLP1-206ENST00000533905 FMNL2Q96PY5 1086 aa13.78□□□□□ -0.2
CLP1-206ENST00000533905 STARD3NLO95772 234 aa13.77□□□□□ -0.21
CLP1-206ENST00000533905 U2AF1L5P0DN76 240 aaPredicted RBP13.77□□□□□ -0.21
CLP1-206ENST00000533905 U2AF1Q01081 240 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLP1-206ENST00000533905 HLFQ16534 295 aa13.77□□□□□ -0.21
CLP1-206ENST00000533905 RBM46Q8TBY0 533 aaKnown RBP13.77□□□□□ -0.21
CLP1-206ENST00000533905 FER1L6Q2WGJ9 1857 aa13.76□□□□□ -0.21
CLP1-206ENST00000533905 ABCC12Q96J65 1359 aa13.76□□□□□ -0.21
CLP1-206ENST00000533905 APLP1P51693 650 aa13.76□□□□□ -0.21
CLP1-206ENST00000533905 DZIP3Q86Y13 1208 aaKnown RBP13.76□□□□□ -0.21
CLP1-206ENST00000533905 ZNF622Q969S3 477 aaKnown RBP eCLIP13.76□□□□□ -0.21
CLP1-206ENST00000533905 CCDC88AQ3V6T2 1871 aa13.76□□□□□ -0.21
CLP1-206ENST00000533905 COL4A5P29400 1685 aa13.75□□□□□ -0.21
CLP1-206ENST00000533905 FAM177BA6PVY3 158 aa13.75□□□□□ -0.21
CLP1-206ENST00000533905 LMNB1P20700 586 aa13.75□□□□□ -0.21
CLP1-206ENST00000533905 KDM3BQ7LBC6 1761 aa13.75□□□□□ -0.21
CLP1-206ENST00000533905 H0YIN7 160 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms