RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 CAPNS2Q96L46 248 aa12.86□□□□□ -0.35
PACS1-213ENST00000533756 THSD7BQ9C0I4 1608 aa12.86□□□□□ -0.35
PACS1-213ENST00000533756 CCDC88AQ3V6T2 1871 aa12.85□□□□□ -0.35
PACS1-213ENST00000533756 POLRMTO00411 1230 aaKnown RBP12.85□□□□□ -0.35
PACS1-213ENST00000533756 TM4SF1P30408 202 aa12.85□□□□□ -0.35
PACS1-213ENST00000533756 MAP2K2P36507 400 aa12.85□□□□□ -0.35
PACS1-213ENST00000533756 FKBP8Q14318 412 aa12.85□□□□□ -0.35
PACS1-213ENST00000533756 HDGFL2Q7Z4V5 671 aaPredicted RBP12.85□□□□□ -0.35
PACS1-213ENST00000533756 ATG3Q9NT62 314 aa12.85□□□□□ -0.35
PACS1-213ENST00000533756 EDC4Q6P2E9 1401 aaKnown RBP12.85□□□□□ -0.35
PACS1-213ENST00000533756 CNTROBQ8N137 903 aa12.84□□□□□ -0.35
PACS1-213ENST00000533756 TSKSQ9UJT2 592 aa12.84□□□□□ -0.35
PACS1-213ENST00000533756 SOX10P56693 466 aa12.83□□□□□ -0.36
PACS1-213ENST00000533756 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
PACS1-213ENST00000533756 USP42Q9H9J4 1324 aaKnown RBP12.83□□□□□ -0.36
PACS1-213ENST00000533756 SCN4AP35499 1836 aa12.83□□□□□ -0.36
PACS1-213ENST00000533756 RTL1A6NKG5 1358 aa12.82□□□□□ -0.36
PACS1-213ENST00000533756 KDRP35968 1356 aa12.82□□□□□ -0.36
PACS1-213ENST00000533756 ABCB7O75027 752 aa12.82□□□□□ -0.36
PACS1-213ENST00000533756 PNMA8AQ86V59 439 aaPredicted RBP12.82□□□□□ -0.36
PACS1-213ENST00000533756 ZNF831Q5JPB2 1677 aa12.82□□□□□ -0.36
PACS1-213ENST00000533756 LTBP3Q9NS15 1303 aa12.82□□□□□ -0.36
PACS1-213ENST00000533756 DICER1Q9UPY3 1922 aaKnown RBP12.82□□□□□ -0.36
PACS1-213ENST00000533756 EAPPQ56P03 285 aaPredicted RBP12.81□□□□□ -0.36
PACS1-213ENST00000533756 HABP4Q5JVS0 413 aaKnown RBP12.81□□□□□ -0.36
PACS1-213ENST00000533756 SLC4A9Q96Q91 983 aa12.81□□□□□ -0.36
PACS1-213ENST00000533756 SRP68Q9UHB9 627 aaKnown RBP12.81□□□□□ -0.36
PACS1-213ENST00000533756 LTBP1Q14766 1721 aa12.8□□□□□ -0.36
PACS1-213ENST00000533756 H0YIN7 160 aa12.8□□□□□ -0.36
PACS1-213ENST00000533756 CYP4F22Q6NT55 531 aa12.8□□□□□ -0.36
PACS1-213ENST00000533756 PAXIP1Q6ZW49 1069 aaPredicted RBP12.8□□□□□ -0.36
PACS1-213ENST00000533756 NBPF15Q8N660 670 aa12.8□□□□□ -0.36
PACS1-213ENST00000533756 COG3Q96JB2 828 aa12.8□□□□□ -0.36
PACS1-213ENST00000533756 DDX21Q9NR30 783 aaKnown RBP eCLIP12.8□□□□□ -0.36
PACS1-213ENST00000533756 TERF2IPQ9NYB0 399 aa12.8□□□□□ -0.36
PACS1-213ENST00000533756 SPG7Q9UQ90 795 aa12.8□□□□□ -0.36
PACS1-213ENST00000533756 MAP1SQ66K74 1059 aaPredicted RBP12.79□□□□□ -0.36
PACS1-213ENST00000533756 C2CD5Q86YS7 1000 aa12.79□□□□□ -0.36
PACS1-213ENST00000533756 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
PACS1-213ENST00000533756 HACL1Q9UJ83 578 aa12.79□□□□□ -0.36
PACS1-213ENST00000533756 DLEC1Q9Y238 1755 aa12.79□□□□□ -0.36
PACS1-213ENST00000533756 FBLN1P23142 703 aa12.78□□□□□ -0.36
PACS1-213ENST00000533756 EPHX2P34913 555 aa12.78□□□□□ -0.36
PACS1-213ENST00000533756 TMC1Q8TDI8 760 aa12.78□□□□□ -0.36
PACS1-213ENST00000533756 TAOK3Q9H2K8 898 aa12.78□□□□□ -0.36
PACS1-213ENST00000533756 ADAMTSL1Q8N6G6 1762 aa12.78□□□□□ -0.36
PACS1-213ENST00000533756 C21orf2O43822 256 aa12.77□□□□□ -0.37
PACS1-213ENST00000533756 BRPF1P55201 1214 aaPredicted RBP12.77□□□□□ -0.37
PACS1-213ENST00000533756 GRM1Q13255 1194 aa12.77□□□□□ -0.37
PACS1-213ENST00000533756 SLC12A5Q9H2X9 1139 aa12.77□□□□□ -0.37
PACS1-213ENST00000533756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.37
PACS1-213ENST00000533756 PDZRN3Q9UPQ7 1066 aa12.77□□□□□ -0.37
PACS1-213ENST00000533756 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
PACS1-213ENST00000533756 CASP8AP2Q9UKL3 1982 aa12.76□□□□□ -0.37
PACS1-213ENST00000533756 DLL1O00548 723 aa12.76□□□□□ -0.37
PACS1-213ENST00000533756 IFNL2Q8IZJ0 200 aa12.76□□□□□ -0.37
PACS1-213ENST00000533756 INSRP06213 1382 aa12.76□□□□□ -0.37
PACS1-213ENST00000533756 AOC2O75106 756 aa12.75□□□□□ -0.37
PACS1-213ENST00000533756 ZPR1O75312 459 aa12.75□□□□□ -0.37
PACS1-213ENST00000533756 TLL2Q9Y6L7 1015 aa12.75□□□□□ -0.37
PACS1-213ENST00000533756 FER1L6Q2WGJ9 1857 aa12.74□□□□□ -0.37
PACS1-213ENST00000533756 A0A1W2PP64 1363 aa12.74□□□□□ -0.37
PACS1-213ENST00000533756 SERPINB2P05120 415 aa12.74□□□□□ -0.37
PACS1-213ENST00000533756 CRKLP46109 303 aaKnown RBP12.74□□□□□ -0.37
PACS1-213ENST00000533756 NRXN2Q9P2S2 1712 aa12.74□□□□□ -0.37
PACS1-213ENST00000533756 PHKG2P15735 406 aa12.73□□□□□ -0.37
PACS1-213ENST00000533756 NFIXQ14938 502 aa12.73□□□□□ -0.37
PACS1-213ENST00000533756 RRS1Q15050 365 aaKnown RBP12.73□□□□□ -0.37
PACS1-213ENST00000533756 HSP90AB2PQ58FF8 381 aa12.73□□□□□ -0.37
PACS1-213ENST00000533756 USPL1Q5W0Q7 1092 aa12.73□□□□□ -0.37
PACS1-213ENST00000533756 HHIPL1Q96JK4 782 aa12.73□□□□□ -0.37
PACS1-213ENST00000533756 MYH14Q7Z406 1995 aaKnown RBP12.72□□□□□ -0.37
PACS1-213ENST00000533756 ERVV-2B6SEH9 535 aa12.72□□□□□ -0.37
PACS1-213ENST00000533756 SOGA3Q5TF21 947 aa12.72□□□□□ -0.37
PACS1-213ENST00000533756 CST9Q5W186 159 aa12.72□□□□□ -0.37
PACS1-213ENST00000533756 ZNF622Q969S3 477 aaKnown RBP eCLIP12.72□□□□□ -0.37
PACS1-213ENST00000533756 KIF24Q5T7B8 1368 aa12.71□□□□□ -0.37
PACS1-213ENST00000533756 RAB3GAP2Q9H2M9 1393 aa12.71□□□□□ -0.37
PACS1-213ENST00000533756 FXR1P51114 621 aaKnown RBP eCLIP12.71□□□□□ -0.37
PACS1-213ENST00000533756 AFDNP55196 1824 aaKnown RBP12.7□□□□□ -0.38
PACS1-213ENST00000533756 PDE6BP35913 854 aa12.7□□□□□ -0.38
PACS1-213ENST00000533756 SAPCD2Q86UD0 394 aa12.7□□□□□ -0.38
PACS1-213ENST00000533756 NCAPD2Q15021 1401 aa12.7□□□□□ -0.38
PACS1-213ENST00000533756 FLT4P35916 1363 aa12.69□□□□□ -0.38
PACS1-213ENST00000533756 TONSLQ96HA7 1378 aa12.69□□□□□ -0.38
PACS1-213ENST00000533756 CIAPIN1Q6FI81 312 aa12.69□□□□□ -0.38
PACS1-213ENST00000533756 INTS5Q6P9B9 1019 aaKnown RBP12.69□□□□□ -0.38
PACS1-213ENST00000533756 PUS7Q96PZ0 661 aaKnown RBP12.69□□□□□ -0.38
PACS1-213ENST00000533756 BRIP1Q9BX63 1249 aa12.69□□□□□ -0.38
PACS1-213ENST00000533756 NARFQ9UHQ1 456 aa12.69□□□□□ -0.38
PACS1-213ENST00000533756 RNF123Q5XPI4 1314 aa12.68□□□□□ -0.38
PACS1-213ENST00000533756 ZNF541Q9H0D2 1346 aa12.68□□□□□ -0.38
PACS1-213ENST00000533756 FMR1Q06787 632 aaKnown RBP eCLIP12.68□□□□□ -0.38
PACS1-213ENST00000533756 CNKSR1Q969H4 720 aa12.68□□□□□ -0.38
PACS1-213ENST00000533756 CARMIL3Q8ND23 1372 aa12.68□□□□□ -0.38
PACS1-213ENST00000533756 ADAMTS7Q9UKP4 1686 aa12.67□□□□□ -0.38
PACS1-213ENST00000533756 GPC2Q8N158 579 aa12.67□□□□□ -0.38
PACS1-213ENST00000533756 SAGE1Q9NXZ1 904 aa12.67□□□□□ -0.38
PACS1-213ENST00000533756 PTCD1O75127 700 aaKnown RBP12.66□□□□□ -0.38
PACS1-213ENST00000533756 HSP90AB1P08238 724 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms