RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 FAM53CQ9NYF3 392 aa4.93□□□□□ -1.62
ATM-221ENST00000533690 LTBP1Q14766 1721 aa4.93□□□□□ -1.62
ATM-221ENST00000533690 CARMIL3Q8ND23 1372 aa4.93□□□□□ -1.62
ATM-221ENST00000533690 DISP2A7MBM2 1401 aa4.92□□□□□ -1.62
ATM-221ENST00000533690 QSER1Q2KHR3 1735 aa4.92□□□□□ -1.62
ATM-221ENST00000533690 IPO8O15397 1037 aaKnown RBP4.92□□□□□ -1.62
ATM-221ENST00000533690 PRKAR2BP31323 418 aa4.92□□□□□ -1.62
ATM-221ENST00000533690 LMOD3Q0VAK6 560 aa4.92□□□□□ -1.62
ATM-221ENST00000533690 SKOR2Q2VWA4 1001 aaPredicted RBP4.92□□□□□ -1.62
ATM-221ENST00000533690 SSH3Q8TE77 659 aa4.92□□□□□ -1.62
ATM-221ENST00000533690 NUDT16Q96DE0 195 aaKnown RBP4.92□□□□□ -1.62
ATM-221ENST00000533690 GGNBP2Q9H3C7 697 aa4.92□□□□□ -1.62
ATM-221ENST00000533690 CHMP4BQ9H444 224 aaKnown RBP4.92□□□□□ -1.62
ATM-221ENST00000533690 RRP7AQ9Y3A4 280 aaKnown RBP4.92□□□□□ -1.62
ATM-221ENST00000533690 EMILIN1Q9Y6C2 1016 aa4.92□□□□□ -1.62
ATM-221ENST00000533690 NID2Q14112 1375 aa4.92□□□□□ -1.62
ATM-221ENST00000533690 ATRNO75882 1429 aa4.92□□□□□ -1.62
ATM-221ENST00000533690 TRAK2O60296 914 aa4.91□□□□□ -1.62
ATM-221ENST00000533690 EIF5BO60841 1220 aaKnown RBP4.91□□□□□ -1.62
ATM-221ENST00000533690 CDC45O75419 566 aa4.91□□□□□ -1.62
ATM-221ENST00000533690 RABEP1Q15276 862 aa4.91□□□□□ -1.62
ATM-221ENST00000533690 TSGA10IPQ3SY00 556 aa4.91□□□□□ -1.62
ATM-221ENST00000533690 WAPLQ7Z5K2 1190 aa4.91□□□□□ -1.62
ATM-221ENST00000533690 NME9Q86XW9 330 aa4.91□□□□□ -1.62
ATM-221ENST00000533690 API5Q9BZZ5 524 aaKnown RBP4.91□□□□□ -1.62
ATM-221ENST00000533690 SPTLC3Q9NUV7 552 aa4.91□□□□□ -1.62
ATM-221ENST00000533690 ATAD5Q96QE3 1844 aa4.91□□□□□ -1.62
ATM-221ENST00000533690 FBXL16Q8N461 479 aa4.91□□□□□ -1.62
ATM-221ENST00000533690 GRPEL1Q9HAV7 217 aa4.91□□□□□ -1.62
ATM-221ENST00000533690 CWC22Q9HCG8 908 aaKnown RBP4.91□□□□□ -1.62
ATM-221ENST00000533690 NEDD4P46934 1319 aa4.91□□□□□ -1.62
ATM-221ENST00000533690 BAG4O95429 457 aaKnown RBP4.91□□□□□ -1.62
ATM-221ENST00000533690 PANK2Q9BZ23 570 aa4.91□□□□□ -1.62
ATM-221ENST00000533690 CCDC61Q9Y6R9 512 aa4.91□□□□□ -1.62
ATM-221ENST00000533690 CDK5RAP2Q96SN8 1893 aa4.91□□□□□ -1.62
ATM-221ENST00000533690 LTKP29376 864 aa4.9□□□□□ -1.62
ATM-221ENST00000533690 HDGFL2Q7Z4V5 671 aaPredicted RBP4.9□□□□□ -1.62
ATM-221ENST00000533690 IL25Q9H293 177 aa4.9□□□□□ -1.62
ATM-221ENST00000533690 SMC4Q9NTJ3 1288 aa4.9□□□□□ -1.62
ATM-221ENST00000533690 ZRANB1Q9UGI0 708 aa4.9□□□□□ -1.62
ATM-221ENST00000533690 NOL7Q9UMY1 257 aaKnown RBP4.9□□□□□ -1.62
ATM-221ENST00000533690 MCM5P33992 734 aa4.9□□□□□ -1.63
ATM-221ENST00000533690 OFD1O75665 1012 aa4.9□□□□□ -1.63
ATM-221ENST00000533690 SDSP20132 328 aa4.9□□□□□ -1.63
ATM-221ENST00000533690 HSPA4P34932 840 aa4.9□□□□□ -1.63
ATM-221ENST00000533690 CPDO75976 1380 aa4.89□□□□□ -1.63
ATM-221ENST00000533690 DUOX1Q9NRD9 1551 aa4.89□□□□□ -1.63
ATM-221ENST00000533690 COL14A1Q05707 1796 aaKnown RBP4.89□□□□□ -1.63
ATM-221ENST00000533690 TWISTNBQ3B726 338 aaPredicted RBP4.89□□□□□ -1.63
ATM-221ENST00000533690 LSG1Q9H089 658 aaKnown RBP4.89□□□□□ -1.63
ATM-221ENST00000533690 AHDC1Q5TGY3 1603 aaPredicted RBP4.89□□□□□ -1.63
ATM-221ENST00000533690 ACEP12821 1306 aa4.89□□□□□ -1.63
ATM-221ENST00000533690 COL4A1P02462 1669 aa4.89□□□□□ -1.63
ATM-221ENST00000533690 SENP3-EIF4A1A0A087X0R7 540 aa4.89□□□□□ -1.63
ATM-221ENST00000533690 U2AF1L5P0DN76 240 aaPredicted RBP4.89□□□□□ -1.63
ATM-221ENST00000533690 ATP8B2P98198 1209 aa4.89□□□□□ -1.63
ATM-221ENST00000533690 U2AF1Q01081 240 aaKnown RBP eCLIP4.89□□□□□ -1.63
ATM-221ENST00000533690 USPL1Q5W0Q7 1092 aa4.89□□□□□ -1.63
ATM-221ENST00000533690 PAXIP1Q6ZW49 1069 aaPredicted RBP4.89□□□□□ -1.63
ATM-221ENST00000533690 HS6ST3Q8IZP7 471 aa4.89□□□□□ -1.63
ATM-221ENST00000533690 NUP98P52948 1817 aa4.89□□□□□ -1.63
ATM-221ENST00000533690 SALL1Q9NSC2 1324 aa4.89□□□□□ -1.63
ATM-221ENST00000533690 CCDC173Q0VFZ6 552 aa4.88□□□□□ -1.63
ATM-221ENST00000533690 KIF13BQ9NQT8 1826 aa4.88□□□□□ -1.63
ATM-221ENST00000533690 LY75O60449 1722 aa4.88□□□□□ -1.63
ATM-221ENST00000533690 GIGYF1O75420 1035 aaPredicted RBP4.88□□□□□ -1.63
ATM-221ENST00000533690 MEGF6O75095 1541 aa4.88□□□□□ -1.63
ATM-221ENST00000533690 GREB1LQ9C091 1923 aaPredicted RBP4.88□□□□□ -1.63
ATM-221ENST00000533690 RBBP6Q7Z6E9 1792 aaKnown RBP4.88□□□□□ -1.63
ATM-221ENST00000533690 RAD50Q92878 1312 aa4.88□□□□□ -1.63
ATM-221ENST00000533690 RGS3P49796 1198 aa4.88□□□□□ -1.63
ATM-221ENST00000533690 PDE1AP54750 535 aa4.88□□□□□ -1.63
ATM-221ENST00000533690 PDIA6Q15084 440 aa4.88□□□□□ -1.63
ATM-221ENST00000533690 OTUD7AQ8TE49 926 aaPredicted RBP4.88□□□□□ -1.63
ATM-221ENST00000533690 ESYT1Q9BSJ8 1104 aa4.88□□□□□ -1.63
ATM-221ENST00000533690 AGXT2Q9BYV1 514 aa4.88□□□□□ -1.63
ATM-221ENST00000533690 TM6SF1Q9BZW5 370 aa4.88□□□□□ -1.63
ATM-221ENST00000533690 ZBTB12Q9Y330 459 aaPredicted RBP4.88□□□□□ -1.63
ATM-221ENST00000533690 DOT1LQ8TEK3 1739 aa4.88□□□□□ -1.63
ATM-221ENST00000533690 MINK1Q8N4C8 1332 aaPredicted RBP4.87□□□□□ -1.63
ATM-221ENST00000533690 CHMLP26374 656 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 MTHFSDQ2M296 383 aaKnown RBP4.87□□□□□ -1.63
ATM-221ENST00000533690 AEBP1Q8IUX7 1158 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 KAZALD1Q96I82 304 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 ZMYND15Q9H091 742 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 PRDM4Q9UKN5 801 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 ERBB3P21860 1342 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 CACNA1SQ13698 1873 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 SSFA2P28290 1259 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 CCT4P50991 539 aaKnown RBP4.87□□□□□ -1.63
ATM-221ENST00000533690 CASP7P55210 303 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 ZSCAN23Q3MJ62 389 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 BEND3Q5T5X7 828 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 LRSAM1Q6UWE0 723 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 SGIP1Q9BQI5 828 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 TRAIPQ9BWF2 469 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 MORC2Q9Y6X9 1032 aaPredicted RBP4.87□□□□□ -1.63
ATM-221ENST00000533690 PALLDQ8WX93 1383 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 ELP1O95163 1332 aa4.87□□□□□ -1.63
ATM-221ENST00000533690 HOXC9P31274 260 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms