RNA–Protein interactions for RNA: ENST00000533543.5

ZNF250-209, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-209ENST00000533543 ARHGEF1Q92888 912 aaKnown RBP12.39□□□□□ -0.43
ZNF250-209ENST00000533543 COL5A3P25940 1745 aaPredicted RBP12.39□□□□□ -0.43
ZNF250-209ENST00000533543 TJP1Q07157 1748 aa12.38□□□□□ -0.43
ZNF250-209ENST00000533543 TTC5Q8N0Z6 440 aa12.38□□□□□ -0.43
ZNF250-209ENST00000533543 CEMIPQ8WUJ3 1361 aa12.38□□□□□ -0.43
ZNF250-209ENST00000533543 MYH14Q7Z406 1995 aaKnown RBP12.38□□□□□ -0.43
ZNF250-209ENST00000533543 HAX1O00165 279 aa12.37□□□□□ -0.43
ZNF250-209ENST00000533543 RFC4P35249 363 aa12.37□□□□□ -0.43
ZNF250-209ENST00000533543 INTS5Q6P9B9 1019 aaKnown RBP12.37□□□□□ -0.43
ZNF250-209ENST00000533543 MCM10Q7L590 875 aa12.37□□□□□ -0.43
ZNF250-209ENST00000533543 RTF1Q92541 710 aaKnown RBP12.37□□□□□ -0.43
ZNF250-209ENST00000533543 VIRMAQ69YN4 1812 aaKnown RBP12.37□□□□□ -0.43
ZNF250-209ENST00000533543 MMP10P09238 476 aa12.36□□□□□ -0.43
ZNF250-209ENST00000533543 CYP19A1P11511 503 aaPredicted RBP12.36□□□□□ -0.43
ZNF250-209ENST00000533543 DCTN1Q14203 1278 aa12.36□□□□□ -0.43
ZNF250-209ENST00000533543 FKBP8Q14318 412 aa12.36□□□□□ -0.43
ZNF250-209ENST00000533543 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
ZNF250-209ENST00000533543 ZNF790Q6PG37 636 aa12.36□□□□□ -0.43
ZNF250-209ENST00000533543 ZNF496Q96IT1 587 aaPredicted RBP12.36□□□□□ -0.43
ZNF250-209ENST00000533543 CCDC87Q9NVE4 849 aa12.36□□□□□ -0.43
ZNF250-209ENST00000533543 SRP68Q9UHB9 627 aaKnown RBP12.36□□□□□ -0.43
ZNF250-209ENST00000533543 MYBBP1AQ9BQG0 1328 aaKnown RBP12.36□□□□□ -0.43
ZNF250-209ENST00000533543 BTBD11A6QL63 1104 aa12.35□□□□□ -0.43
ZNF250-209ENST00000533543 KCNQ3O43525 872 aa12.35□□□□□ -0.43
ZNF250-209ENST00000533543 NEFMP07197 916 aa12.35□□□□□ -0.43
ZNF250-209ENST00000533543 GYS1P13807 737 aa12.35□□□□□ -0.43
ZNF250-209ENST00000533543 GPR162Q16538 588 aa12.35□□□□□ -0.43
ZNF250-209ENST00000533543 PELP1Q8IZL8 1130 aaKnown RBP12.35□□□□□ -0.43
ZNF250-209ENST00000533543 VSIG10Q8N0Z9 540 aa12.35□□□□□ -0.43
ZNF250-209ENST00000533543 PLEKHF1Q96S99 279 aa12.35□□□□□ -0.43
ZNF250-209ENST00000533543 ZBTB1Q9Y2K1 713 aa12.35□□□□□ -0.43
ZNF250-209ENST00000533543 CICQ96RK0 1608 aaPredicted RBP12.35□□□□□ -0.43
ZNF250-209ENST00000533543 GOLGB1Q14789 3259 aaKnown RBP12.35□□□□□ -0.43
ZNF250-209ENST00000533543 SOS1Q07889 1333 aaPredicted RBP12.35□□□□□ -0.43
ZNF250-209ENST00000533543 YY1P25490 414 aa12.34□□□□□ -0.43
ZNF250-209ENST00000533543 NLGN1Q8N2Q7 840 aa12.34□□□□□ -0.43
ZNF250-209ENST00000533543 CD2APQ9Y5K6 639 aa12.34□□□□□ -0.43
ZNF250-209ENST00000533543 HEG1Q9ULI3 1381 aa12.33□□□□□ -0.44
ZNF250-209ENST00000533543 HTATSF1O43719 755 aaKnown RBP12.33□□□□□ -0.44
ZNF250-209ENST00000533543 FMNL2Q96PY5 1086 aa12.33□□□□□ -0.44
ZNF250-209ENST00000533543 USP42Q9H9J4 1324 aaKnown RBP12.33□□□□□ -0.44
ZNF250-209ENST00000533543 MAPK8IP3Q9UPT6 1336 aa12.33□□□□□ -0.44
ZNF250-209ENST00000533543 SIPA1L3O60292 1781 aaPredicted RBP12.33□□□□□ -0.44
ZNF250-209ENST00000533543 UBR2Q8IWV8 1755 aa12.33□□□□□ -0.44
ZNF250-209ENST00000533543 STARD3NLO95772 234 aa12.32□□□□□ -0.44
ZNF250-209ENST00000533543 CANXP27824 592 aaKnown RBP12.32□□□□□ -0.44
ZNF250-209ENST00000533543 NFE2L2Q16236 605 aa12.32□□□□□ -0.44
ZNF250-209ENST00000533543 PRKRIP1Q9H875 184 aaPredicted RBP12.32□□□□□ -0.44
ZNF250-209ENST00000533543 COL15A1P39059 1388 aa12.31□□□□□ -0.44
ZNF250-209ENST00000533543 C4AP0C0L4 1744 aa12.31□□□□□ -0.44
ZNF250-209ENST00000533543 ZPR1O75312 459 aa12.31□□□□□ -0.44
ZNF250-209ENST00000533543 YBX3P16989 372 aaKnown RBP eCLIP12.31□□□□□ -0.44
ZNF250-209ENST00000533543 USPL1Q5W0Q7 1092 aa12.31□□□□□ -0.44
ZNF250-209ENST00000533543 PNNQ9H307 717 aaKnown RBP12.31□□□□□ -0.44
ZNF250-209ENST00000533543 THUMPD2Q9BTF0 503 aaKnown RBP12.3□□□□□ -0.44
ZNF250-209ENST00000533543 TEX13AQ9BXU3 409 aaPredicted RBP12.3□□□□□ -0.44
ZNF250-209ENST00000533543 MIS18AQ9NYP9 233 aa12.3□□□□□ -0.44
ZNF250-209ENST00000533543 WWC3Q9ULE0 1092 aa12.3□□□□□ -0.44
ZNF250-209ENST00000533543 PARP3Q9Y6F1 533 aa12.3□□□□□ -0.44
ZNF250-209ENST00000533543 PRAMEF22A3QJZ6 481 aa12.29□□□□□ -0.44
ZNF250-209ENST00000533543 A1BGP04217 495 aa12.29□□□□□ -0.44
ZNF250-209ENST00000533543 EIF5P55010 431 aaKnown RBP12.29□□□□□ -0.44
ZNF250-209ENST00000533543 DDR1Q08345 913 aa12.29□□□□□ -0.44
ZNF250-209ENST00000533543 TAF7Q15545 349 aaPredicted RBP12.29□□□□□ -0.44
ZNF250-209ENST00000533543 CCDC146Q8IYE0 955 aa12.29□□□□□ -0.44
ZNF250-209ENST00000533543 NARFQ9UHQ1 456 aa12.29□□□□□ -0.44
ZNF250-209ENST00000533543 ZNF330Q9Y3S2 320 aaPredicted RBP12.29□□□□□ -0.44
ZNF250-209ENST00000533543 C10orf71Q711Q0 1435 aa12.28□□□□□ -0.44
ZNF250-209ENST00000533543 WDR43Q15061 677 aaKnown RBP eCLIP12.28□□□□□ -0.44
ZNF250-209ENST00000533543 BCL2L12Q9HB09 334 aa12.28□□□□□ -0.44
ZNF250-209ENST00000533543 FARP1Q9Y4F1 1045 aaPredicted RBP12.28□□□□□ -0.44
ZNF250-209ENST00000533543 USP16Q9Y5T5 823 aa12.28□□□□□ -0.44
ZNF250-209ENST00000533543 A0A087WZG4 1122 aa12.27□□□□□ -0.45
ZNF250-209ENST00000533543 GRIN3BO60391 1043 aa12.27□□□□□ -0.45
ZNF250-209ENST00000533543 SNRPA1P09661 255 aaKnown RBP12.27□□□□□ -0.45
ZNF250-209ENST00000533543 PIP4K2AP48426 406 aaPredicted RBP12.27□□□□□ -0.45
ZNF250-209ENST00000533543 RIPK4P57078 832 aa12.27□□□□□ -0.45
ZNF250-209ENST00000533543 CREBZFQ9NS37 354 aa12.27□□□□□ -0.45
ZNF250-209ENST00000533543 RRP7AQ9Y3A4 280 aaKnown RBP12.27□□□□□ -0.45
ZNF250-209ENST00000533543 ZNF316A6NFI3 1004 aaPredicted RBP12.26□□□□□ -0.45
ZNF250-209ENST00000533543 POLRMTO00411 1230 aaKnown RBP12.26□□□□□ -0.45
ZNF250-209ENST00000533543 TM4SF1P30408 202 aa12.26□□□□□ -0.45
ZNF250-209ENST00000533543 IL6STP40189 918 aaPredicted RBP12.26□□□□□ -0.45
ZNF250-209ENST00000533543 TMPOP42166 694 aaKnown RBP12.26□□□□□ -0.45
ZNF250-209ENST00000533543 NFIXQ14938 502 aa12.26□□□□□ -0.45
ZNF250-209ENST00000533543 PNISRQ8TF01 805 aaKnown RBP12.26□□□□□ -0.45
ZNF250-209ENST00000533543 TBC1D2BQ9UPU7 963 aa12.26□□□□□ -0.45
ZNF250-209ENST00000533543 DLG5Q8TDM6 1919 aa12.26□□□□□ -0.45
ZNF250-209ENST00000533543 PXDNLA1KZ92 1463 aa12.26□□□□□ -0.45
ZNF250-209ENST00000533543 A0A0G2JLW4 131 aa12.25□□□□□ -0.45
ZNF250-209ENST00000533543 DPEP1P16444 411 aa12.25□□□□□ -0.45
ZNF250-209ENST00000533543 SP7Q8TDD2 431 aaPredicted RBP12.25□□□□□ -0.45
ZNF250-209ENST00000533543 ADAMTS8Q9UP79 889 aa12.25□□□□□ -0.45
ZNF250-209ENST00000533543 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
ZNF250-209ENST00000533543 TGFB2P61812 414 aa12.24□□□□□ -0.45
ZNF250-209ENST00000533543 NEUROD2Q15784 382 aa12.24□□□□□ -0.45
ZNF250-209ENST00000533543 BICDL1Q6ZP65 573 aa12.24□□□□□ -0.45
ZNF250-209ENST00000533543 NPM2Q86SE8 214 aaKnown RBP12.24□□□□□ -0.45
ZNF250-209ENST00000533543 RUNDC1Q96C34 613 aa12.24□□□□□ -0.45
ZNF250-209ENST00000533543 NBPF26B4DH59 902 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms