RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 APAF1O14727 1248 aa6.7□□□□□ -1.34
CKAP5-212ENST00000533413 MEX3CQ5U5Q3 659 aaKnown RBP6.7□□□□□ -1.34
CKAP5-212ENST00000533413 ZNF772Q68DY9 489 aaPredicted RBP6.7□□□□□ -1.34
CKAP5-212ENST00000533413 HDGFL2Q7Z4V5 671 aaPredicted RBP6.7□□□□□ -1.34
CKAP5-212ENST00000533413 ATL2Q8NHH9 583 aa6.7□□□□□ -1.34
CKAP5-212ENST00000533413 CABP2Q9NPB3 220 aa6.7□□□□□ -1.34
CKAP5-212ENST00000533413 CD163L1Q9NR16 1453 aa6.7□□□□□ -1.34
CKAP5-212ENST00000533413 CDK12Q9NYV4 1490 aaPredicted RBP6.7□□□□□ -1.34
CKAP5-212ENST00000533413 NUTM2FA1L443 756 aa6.69□□□□□ -1.34
CKAP5-212ENST00000533413 TERF1P54274 439 aa6.69□□□□□ -1.34
CKAP5-212ENST00000533413 CCDC181Q5TID7 509 aa6.69□□□□□ -1.34
CKAP5-212ENST00000533413 DNAJC14Q6Y2X3 702 aaPredicted RBP6.69□□□□□ -1.34
CKAP5-212ENST00000533413 ANKRD36BQ8N2N9 1353 aa6.69□□□□□ -1.34
CKAP5-212ENST00000533413 EPB41L2O43491 1005 aaKnown RBP6.69□□□□□ -1.34
CKAP5-212ENST00000533413 BCAR3O75815 825 aa6.69□□□□□ -1.34
CKAP5-212ENST00000533413 POLA2Q14181 598 aa6.69□□□□□ -1.34
CKAP5-212ENST00000533413 NGEFQ8N5V2 710 aa6.69□□□□□ -1.34
CKAP5-212ENST00000533413 PMFBP1Q8TBY8 1022 aa6.69□□□□□ -1.34
CKAP5-212ENST00000533413 USP19O94966 1318 aa6.69□□□□□ -1.34
CKAP5-212ENST00000533413 ZNF521Q96K83 1311 aa6.69□□□□□ -1.34
CKAP5-212ENST00000533413 USP31Q70CQ4 1352 aa6.69□□□□□ -1.34
CKAP5-212ENST00000533413 FAM208AQ9UK61 1670 aaKnown RBP6.68□□□□□ -1.34
CKAP5-212ENST00000533413 FSD2A1L4K1 749 aa6.68□□□□□ -1.34
CKAP5-212ENST00000533413 TTC36A6NLP5 189 aa6.68□□□□□ -1.34
CKAP5-212ENST00000533413 MMP14P50281 582 aa6.68□□□□□ -1.34
CKAP5-212ENST00000533413 PDE3AQ14432 1141 aa6.68□□□□□ -1.34
CKAP5-212ENST00000533413 MAMSTRQ6ZN01 415 aa6.68□□□□□ -1.34
CKAP5-212ENST00000533413 SLKQ9H2G2 1235 aaPredicted RBP6.68□□□□□ -1.34
CKAP5-212ENST00000533413 PNNQ9H307 717 aaKnown RBP6.68□□□□□ -1.34
CKAP5-212ENST00000533413 CABP1Q9NZU7 370 aa6.68□□□□□ -1.34
CKAP5-212ENST00000533413 LMO7Q8WWI1 1683 aa6.68□□□□□ -1.34
CKAP5-212ENST00000533413 CPDO75976 1380 aa6.68□□□□□ -1.34
CKAP5-212ENST00000533413 IGHDP01880 384 aa6.68□□□□□ -1.34
CKAP5-212ENST00000533413 NBPF11Q86T75 865 aa6.68□□□□□ -1.34
CKAP5-212ENST00000533413 DDX17Q92841 729 aaKnown RBP6.68□□□□□ -1.34
CKAP5-212ENST00000533413 SLIT2O94813 1529 aa6.67□□□□□ -1.34
CKAP5-212ENST00000533413 FNBP4Q8N3X1 1017 aaPredicted RBP6.67□□□□□ -1.34
CKAP5-212ENST00000533413 RBM46Q8TBY0 533 aaKnown RBP6.67□□□□□ -1.34
CKAP5-212ENST00000533413 IRF6O14896 467 aa6.67□□□□□ -1.34
CKAP5-212ENST00000533413 PDE4DQ08499 809 aa6.67□□□□□ -1.34
CKAP5-212ENST00000533413 TRMT2AQ8IZ69 625 aaKnown RBP6.67□□□□□ -1.34
CKAP5-212ENST00000533413 COG6Q9Y2V7 657 aa6.67□□□□□ -1.34
CKAP5-212ENST00000533413 LTN1O94822 1766 aa6.67□□□□□ -1.34
CKAP5-212ENST00000533413 MCM6Q14566 821 aa6.66□□□□□ -1.34
CKAP5-212ENST00000533413 MAP7D2Q96T17 732 aa6.66□□□□□ -1.34
CKAP5-212ENST00000533413 A0A1W2PP64 1363 aa6.66□□□□□ -1.34
CKAP5-212ENST00000533413 WNK3Q9BYP7 1800 aa6.66□□□□□ -1.34
CKAP5-212ENST00000533413 NFAT5O94916 1531 aa6.66□□□□□ -1.34
CKAP5-212ENST00000533413 ATRNO75882 1429 aa6.66□□□□□ -1.34
CKAP5-212ENST00000533413 TTC21BQ7Z4L5 1316 aa6.66□□□□□ -1.34
CKAP5-212ENST00000533413 TCF3P15923 654 aa6.66□□□□□ -1.34
CKAP5-212ENST00000533413 ZNF280DQ6N043 979 aa6.66□□□□□ -1.34
CKAP5-212ENST00000533413 KCNH5Q8NCM2 988 aa6.66□□□□□ -1.34
CKAP5-212ENST00000533413 PLSCR2Q9NRY7 297 aa6.66□□□□□ -1.34
CKAP5-212ENST00000533413 GOLGA6CA6NDK9 693 aa6.65□□□□□ -1.34
CKAP5-212ENST00000533413 GOLGA6BA6NDN3 693 aa6.65□□□□□ -1.34
CKAP5-212ENST00000533413 GOLGA6DP0CG33 693 aa6.65□□□□□ -1.34
CKAP5-212ENST00000533413 ERCC3P19447 782 aa6.65□□□□□ -1.34
CKAP5-212ENST00000533413 IRX3P78415 501 aaPredicted RBP6.65□□□□□ -1.34
CKAP5-212ENST00000533413 SND1Q7KZF4 910 aaKnown RBP eCLIP6.65□□□□□ -1.34
CKAP5-212ENST00000533413 PANK1Q8TE04 598 aa6.65□□□□□ -1.34
CKAP5-212ENST00000533413 GOLGA6AQ9NYA3 693 aa6.65□□□□□ -1.34
CKAP5-212ENST00000533413 COL18A1P39060 1754 aa6.65□□□□□ -1.34
CKAP5-212ENST00000533413 OVOS2A0A0J9YW53 1432 aa6.65□□□□□ -1.34
CKAP5-212ENST00000533413 OVOS2Q6IE36 1432 aa6.65□□□□□ -1.34
CKAP5-212ENST00000533413 NSD2O96028 1365 aa6.65□□□□□ -1.34
CKAP5-212ENST00000533413 XPCQ01831 940 aaPredicted RBP6.65□□□□□ -1.34
CKAP5-212ENST00000533413 KCNA1Q09470 495 aa6.65□□□□□ -1.34
CKAP5-212ENST00000533413 CLEC4GQ6UXB4 293 aa6.65□□□□□ -1.34
CKAP5-212ENST00000533413 SDR16C5Q8N3Y7 309 aa6.65□□□□□ -1.35
CKAP5-212ENST00000533413 ABTB2Q8N961 1025 aa6.65□□□□□ -1.35
CKAP5-212ENST00000533413 AK7Q96M32 723 aa6.65□□□□□ -1.35
CKAP5-212ENST00000533413 RWDD1Q9H446 243 aaPredicted RBP6.65□□□□□ -1.35
CKAP5-212ENST00000533413 AFF2P51816 1311 aa6.64□□□□□ -1.35
CKAP5-212ENST00000533413 CCDC194A0A1B0GVG4 234 aa6.64□□□□□ -1.35
CKAP5-212ENST00000533413 GOLGA6L3A6NEY3 463 aa6.64□□□□□ -1.35
CKAP5-212ENST00000533413 NUTM2BA6NNL0 878 aaPredicted RBP6.64□□□□□ -1.35
CKAP5-212ENST00000533413 NUTM2EB1AL46 878 aaPredicted RBP6.64□□□□□ -1.35
CKAP5-212ENST00000533413 SEC24BO95487 1268 aa6.64□□□□□ -1.35
CKAP5-212ENST00000533413 APLP1P51693 650 aa6.64□□□□□ -1.35
CKAP5-212ENST00000533413 CASC1Q6TDU7 716 aa6.64□□□□□ -1.35
CKAP5-212ENST00000533413 DPH6Q7L8W6 267 aa6.64□□□□□ -1.35
CKAP5-212ENST00000533413 NUTM2AQ8IVF1 878 aaPredicted RBP6.64□□□□□ -1.35
CKAP5-212ENST00000533413 NPC1L1Q9UHC9 1359 aa6.64□□□□□ -1.35
CKAP5-212ENST00000533413 RBM47A0AV96 593 aaKnown RBP6.64□□□□□ -1.35
CKAP5-212ENST00000533413 U2SURPO15042 1029 aaKnown RBP6.64□□□□□ -1.35
CKAP5-212ENST00000533413 ARID4AP29374 1257 aaPredicted RBP6.64□□□□□ -1.35
CKAP5-212ENST00000533413 AXDND1Q5T1B0 1012 aaPredicted RBP6.64□□□□□ -1.35
CKAP5-212ENST00000533413 EGFL6Q8IUX8 553 aa6.64□□□□□ -1.35
CKAP5-212ENST00000533413 MCCD1P59942 119 aaPredicted RBP6.63□□□□□ -1.35
CKAP5-212ENST00000533413 METTL14Q9HCE5 456 aaKnown RBP6.63□□□□□ -1.35
CKAP5-212ENST00000533413 TRPC5Q9UL62 973 aaPredicted RBP6.63□□□□□ -1.35
CKAP5-212ENST00000533413 RTL1A6NKG5 1358 aa6.63□□□□□ -1.35
CKAP5-212ENST00000533413 KIF24Q5T7B8 1368 aa6.63□□□□□ -1.35
CKAP5-212ENST00000533413 AATKQ6ZMQ8 1374 aa6.63□□□□□ -1.35
CKAP5-212ENST00000533413 DMTNQ08495 405 aa6.63□□□□□ -1.35
CKAP5-212ENST00000533413 LMOD3Q0VAK6 560 aa6.63□□□□□ -1.35
CKAP5-212ENST00000533413 NGLY1Q96IV0 654 aa6.63□□□□□ -1.35
CKAP5-212ENST00000533413 BCL9LQ86UU0 1499 aa6.63□□□□□ -1.35
CKAP5-212ENST00000533413 ZNF500O60304 480 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms