RNA–Protein interactions for RNA: ENST00000533155.5

NCAPD3-210, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 3

Gene NCAPD3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-210ENST00000533155 PARP3Q9Y6F1 533 aa22.85■■□□□ 1.25
NCAPD3-210ENST00000533155 DCTN1Q14203 1278 aa22.84■■□□□ 1.25
NCAPD3-210ENST00000533155 SRP68Q9UHB9 627 aaKnown RBP22.84■■□□□ 1.25
NCAPD3-210ENST00000533155 COL15A1P39059 1388 aa22.84■■□□□ 1.25
NCAPD3-210ENST00000533155 MAPK8IP3Q9UPT6 1336 aa22.83■■□□□ 1.25
NCAPD3-210ENST00000533155 UTRNP46939 3433 aa22.83■■□□□ 1.24
NCAPD3-210ENST00000533155 KCNQ3O43525 872 aa22.82■■□□□ 1.24
NCAPD3-210ENST00000533155 YBX3P16989 372 aaKnown RBP eCLIP22.82■■□□□ 1.24
NCAPD3-210ENST00000533155 CANXP27824 592 aaKnown RBP22.81■■□□□ 1.24
NCAPD3-210ENST00000533155 FKBP8Q14318 412 aa22.81■■□□□ 1.24
NCAPD3-210ENST00000533155 NFE2L2Q16236 605 aa22.81■■□□□ 1.24
NCAPD3-210ENST00000533155 NARFQ9UHQ1 456 aa22.81■■□□□ 1.24
NCAPD3-210ENST00000533155 C10orf71Q711Q0 1435 aa22.81■■□□□ 1.24
NCAPD3-210ENST00000533155 KIF13BQ9NQT8 1826 aa22.8■■□□□ 1.24
NCAPD3-210ENST00000533155 A0A087WZG4 1122 aa22.8■■□□□ 1.24
NCAPD3-210ENST00000533155 TGFB2P61812 414 aa22.8■■□□□ 1.24
NCAPD3-210ENST00000533155 TAF7Q15545 349 aaPredicted RBP22.8■■□□□ 1.24
NCAPD3-210ENST00000533155 USPL1Q5W0Q7 1092 aa22.8■■□□□ 1.24
NCAPD3-210ENST00000533155 NPM2Q86SE8 214 aaKnown RBP22.78■■□□□ 1.24
NCAPD3-210ENST00000533155 PRKRIP1Q9H875 184 aaPredicted RBP22.78■■□□□ 1.24
NCAPD3-210ENST00000533155 EIF5P55010 431 aaKnown RBP22.77■■□□□ 1.24
NCAPD3-210ENST00000533155 PNISRQ8TF01 805 aaKnown RBP22.77■■□□□ 1.24
NCAPD3-210ENST00000533155 SNRPA1P09661 255 aaKnown RBP22.76■■□□□ 1.23
NCAPD3-210ENST00000533155 IL6STP40189 918 aaPredicted RBP22.76■■□□□ 1.23
NCAPD3-210ENST00000533155 PXDNLA1KZ92 1463 aa22.76■■□□□ 1.23
NCAPD3-210ENST00000533155 TM4SF1P30408 202 aa22.75■■□□□ 1.23
NCAPD3-210ENST00000533155 DDR1Q08345 913 aa22.75■■□□□ 1.23
NCAPD3-210ENST00000533155 POLRMTO00411 1230 aaKnown RBP22.74■■□□□ 1.23
NCAPD3-210ENST00000533155 A1BGP04217 495 aa22.74■■□□□ 1.23
NCAPD3-210ENST00000533155 WDR43Q15061 677 aaKnown RBP eCLIP22.74■■□□□ 1.23
NCAPD3-210ENST00000533155 MIS18AQ9NYP9 233 aa22.74■■□□□ 1.23
NCAPD3-210ENST00000533155 ZNF330Q9Y3S2 320 aaPredicted RBP22.74■■□□□ 1.23
NCAPD3-210ENST00000533155 USP16Q9Y5T5 823 aa22.74■■□□□ 1.23
NCAPD3-210ENST00000533155 GOLGB1Q14789 3259 aaKnown RBP22.74■■□□□ 1.23
NCAPD3-210ENST00000533155 RIPK4P57078 832 aa22.73■■□□□ 1.23
NCAPD3-210ENST00000533155 ZNF784Q8NCA9 323 aaPredicted RBP22.73■■□□□ 1.23
NCAPD3-210ENST00000533155 N4BP2Q86UW6 1770 aaPredicted RBP22.73■■□□□ 1.23
NCAPD3-210ENST00000533155 NFIXQ14938 502 aa22.72■■□□□ 1.23
NCAPD3-210ENST00000533155 WWC3Q9ULE0 1092 aa22.72■■□□□ 1.23
NCAPD3-210ENST00000533155 KIAA1551Q9HCM1 1747 aa22.71■■□□□ 1.23
NCAPD3-210ENST00000533155 A0A0G2JLW4 131 aa22.71■■□□□ 1.23
NCAPD3-210ENST00000533155 BCL2L12Q9HB09 334 aa22.71■■□□□ 1.23
NCAPD3-210ENST00000533155 PRAMEF22A3QJZ6 481 aa22.7■■□□□ 1.22
NCAPD3-210ENST00000533155 ZNF316A6NFI3 1004 aaPredicted RBP22.7■■□□□ 1.22
NCAPD3-210ENST00000533155 TMPOP42166 694 aaKnown RBP22.7■■□□□ 1.22
NCAPD3-210ENST00000533155 LMOD3Q0VAK6 560 aa22.7■■□□□ 1.22
NCAPD3-210ENST00000533155 THUMPD2Q9BTF0 503 aaKnown RBP22.7■■□□□ 1.22
NCAPD3-210ENST00000533155 KDM3BQ7LBC6 1761 aa22.7■■□□□ 1.22
NCAPD3-210ENST00000533155 AFDNP55196 1824 aaKnown RBP22.69■■□□□ 1.22
NCAPD3-210ENST00000533155 SCN7AQ01118 1682 aa22.69■■□□□ 1.22
NCAPD3-210ENST00000533155 DPEP1P16444 411 aa22.69■■□□□ 1.22
NCAPD3-210ENST00000533155 RUNDC1Q96C34 613 aa22.69■■□□□ 1.22
NCAPD3-210ENST00000533155 TBC1D2BQ9UPU7 963 aa22.69■■□□□ 1.22
NCAPD3-210ENST00000533155 CCDC146Q8IYE0 955 aa22.68■■□□□ 1.22
NCAPD3-210ENST00000533155 ADAMTS8Q9UP79 889 aa22.68■■□□□ 1.22
NCAPD3-210ENST00000533155 SERPINB2P05120 415 aa22.67■■□□□ 1.22
NCAPD3-210ENST00000533155 BCS1LQ9Y276 419 aa22.67■■□□□ 1.22
NCAPD3-210ENST00000533155 DZIP3Q86Y13 1208 aaKnown RBP22.66■■□□□ 1.22
NCAPD3-210ENST00000533155 PIM2Q9P1W9 311 aa22.66■■□□□ 1.22
NCAPD3-210ENST00000533155 NRXN2Q9P2S2 1712 aa22.65■■□□□ 1.22
NCAPD3-210ENST00000533155 EIF4A1P60842 406 aaKnown RBP22.65■■□□□ 1.22
NCAPD3-210ENST00000533155 BICDL1Q6ZP65 573 aa22.65■■□□□ 1.22
NCAPD3-210ENST00000533155 LAMB4A4D0S4 1761 aa22.65■■□□□ 1.22
NCAPD3-210ENST00000533155 BRCA1P38398 1863 aaKnown RBP22.64■■□□□ 1.22
NCAPD3-210ENST00000533155 GIGYF1O75420 1035 aaPredicted RBP22.64■■□□□ 1.21
NCAPD3-210ENST00000533155 CAMTA2O94983 1202 aa22.64■■□□□ 1.21
NCAPD3-210ENST00000533155 PIP4K2AP48426 406 aaPredicted RBP22.64■■□□□ 1.21
NCAPD3-210ENST00000533155 NEUROD2Q15784 382 aa22.64■■□□□ 1.21
NCAPD3-210ENST00000533155 TBC1D9BQ66K14 1250 aa22.64■■□□□ 1.21
NCAPD3-210ENST00000533155 RRP7AQ9Y3A4 280 aaKnown RBP22.64■■□□□ 1.21
NCAPD3-210ENST00000533155 CARMIL3Q8ND23 1372 aa22.63■■□□□ 1.21
NCAPD3-210ENST00000533155 KCNA3P22001 575 aa22.63■■□□□ 1.21
NCAPD3-210ENST00000533155 BABAM1Q9NWV8 329 aa22.63■■□□□ 1.21
NCAPD3-210ENST00000533155 TSPYL4Q9UJ04 414 aa22.62■■□□□ 1.21
NCAPD3-210ENST00000533155 ZNF652Q9Y2D9 606 aa22.62■■□□□ 1.21
NCAPD3-210ENST00000533155 BCORQ6W2J9 1755 aa22.62■■□□□ 1.21
NCAPD3-210ENST00000533155 NBPF26B4DH59 902 aa22.61■■□□□ 1.21
NCAPD3-210ENST00000533155 DALRD3Q5D0E6 543 aaKnown RBP22.61■■□□□ 1.21
NCAPD3-210ENST00000533155 NBPF10Q6P3W6 841 aaKnown RBP22.61■■□□□ 1.21
NCAPD3-210ENST00000533155 CLEC4GQ6UXB4 293 aa22.61■■□□□ 1.21
NCAPD3-210ENST00000533155 NBPF15Q8N660 670 aa22.61■■□□□ 1.21
NCAPD3-210ENST00000533155 SETDB2Q96T68 719 aa22.61■■□□□ 1.21
NCAPD3-210ENST00000533155 RGL2O15211 777 aa22.6■■□□□ 1.21
NCAPD3-210ENST00000533155 CHRNA5P30532 468 aa22.6■■□□□ 1.21
NCAPD3-210ENST00000533155 ARFGEF1Q9Y6D6 1849 aa22.59■■□□□ 1.21
NCAPD3-210ENST00000533155 NPHP1O15259 732 aa22.58■■□□□ 1.21
NCAPD3-210ENST00000533155 TRIM35Q9UPQ4 493 aa22.58■■□□□ 1.21
NCAPD3-210ENST00000533155 PDZRN3Q9UPQ7 1066 aa22.58■■□□□ 1.21
NCAPD3-210ENST00000533155 ARHGAP27Q6ZUM4 889 aa22.57■■□□□ 1.2
NCAPD3-210ENST00000533155 ADCY9O60503 1353 aa22.57■■□□□ 1.2
NCAPD3-210ENST00000533155 ATP10DQ9P241 1426 aa22.57■■□□□ 1.2
NCAPD3-210ENST00000533155 PRR5LQ6MZQ0 368 aa22.56■■□□□ 1.2
NCAPD3-210ENST00000533155 CNBD1Q8NA66 436 aa22.56■■□□□ 1.2
NCAPD3-210ENST00000533155 BRIP1Q9BX63 1249 aa22.56■■□□□ 1.2
NCAPD3-210ENST00000533155 ERBB4Q15303 1308 aa22.56■■□□□ 1.2
NCAPD3-210ENST00000533155 H0YIN7 160 aa22.55■■□□□ 1.2
NCAPD3-210ENST00000533155 PDE6BP35913 854 aa22.55■■□□□ 1.2
NCAPD3-210ENST00000533155 ST5P78524 1137 aa22.55■■□□□ 1.2
NCAPD3-210ENST00000533155 C2CD5Q86YS7 1000 aa22.55■■□□□ 1.2
NCAPD3-210ENST00000533155 DLEC1Q9Y238 1755 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms