RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 MAPK8IP3Q9UPT6 1336 aa40.14■■■■■ 4.02
SSSCA1-207ENST00000533115 NFE2L2Q16236 605 aa40.13■■■■■ 4.01
SSSCA1-207ENST00000533115 DLG5Q8TDM6 1919 aa40.12■■■■■ 4.01
SSSCA1-207ENST00000533115 PRKRIP1Q9H875 184 aaPredicted RBP40.11■■■■■ 4.01
SSSCA1-207ENST00000533115 COL15A1P39059 1388 aa40.1■■■■■ 4.01
SSSCA1-207ENST00000533115 ZPR1O75312 459 aa40.09■■■■■ 4.01
SSSCA1-207ENST00000533115 CANXP27824 592 aaKnown RBP40.09■■■■■ 4.01
SSSCA1-207ENST00000533115 FKBP8Q14318 412 aa40.09■■■■■ 4.01
SSSCA1-207ENST00000533115 GOLGB1Q14789 3259 aaKnown RBP40.09■■■■■ 4.01
SSSCA1-207ENST00000533115 PARP3Q9Y6F1 533 aa40.08■■■■■ 4.01
SSSCA1-207ENST00000533115 TAF7Q15545 349 aaPredicted RBP40.07■■■■■ 4.01
SSSCA1-207ENST00000533115 USPL1Q5W0Q7 1092 aa40.06■■■■■ 4
SSSCA1-207ENST00000533115 NARFQ9UHQ1 456 aa40.05■■■■■ 4
SSSCA1-207ENST00000533115 YBX3P16989 372 aaKnown RBP eCLIP40.03■■■■■ 4
SSSCA1-207ENST00000533115 EIF5P55010 431 aaKnown RBP40.03■■■■■ 4
SSSCA1-207ENST00000533115 KIF13BQ9NQT8 1826 aa40.01■■■■■ 4
SSSCA1-207ENST00000533115 CHD4Q14839 1912 aa40■■■■□ 3.99
SSSCA1-207ENST00000533115 C10orf71Q711Q0 1435 aa39.99■■■■□ 3.99
SSSCA1-207ENST00000533115 A0A087WZG4 1122 aa39.99■■■■□ 3.99
SSSCA1-207ENST00000533115 GRIN3BO60391 1043 aa39.99■■■■□ 3.99
SSSCA1-207ENST00000533115 SNRPA1P09661 255 aaKnown RBP39.99■■■■□ 3.99
SSSCA1-207ENST00000533115 PNISRQ8TF01 805 aaKnown RBP39.99■■■■□ 3.99
SSSCA1-207ENST00000533115 MIS18AQ9NYP9 233 aa39.99■■■■□ 3.99
SSSCA1-207ENST00000533115 USP16Q9Y5T5 823 aa39.99■■■■□ 3.99
SSSCA1-207ENST00000533115 A1BGP04217 495 aa39.98■■■■□ 3.99
SSSCA1-207ENST00000533115 TM4SF1P30408 202 aa39.98■■■■□ 3.99
SSSCA1-207ENST00000533115 DDR1Q08345 913 aa39.98■■■■□ 3.99
SSSCA1-207ENST00000533115 WDR43Q15061 677 aaKnown RBP eCLIP39.98■■■■□ 3.99
SSSCA1-207ENST00000533115 IL6STP40189 918 aaPredicted RBP39.97■■■■□ 3.99
SSSCA1-207ENST00000533115 THUMPD2Q9BTF0 503 aaKnown RBP39.97■■■■□ 3.99
SSSCA1-207ENST00000533115 PRAMEF22A3QJZ6 481 aa39.96■■■■□ 3.99
SSSCA1-207ENST00000533115 RIPK4P57078 832 aa39.95■■■■□ 3.99
SSSCA1-207ENST00000533115 TGFB2P61812 414 aa39.95■■■■□ 3.99
SSSCA1-207ENST00000533115 BCL2L12Q9HB09 334 aa39.95■■■■□ 3.99
SSSCA1-207ENST00000533115 POLRMTO00411 1230 aaKnown RBP39.94■■■■□ 3.98
SSSCA1-207ENST00000533115 PXDNLA1KZ92 1463 aa39.94■■■■□ 3.98
SSSCA1-207ENST00000533115 ZNF316A6NFI3 1004 aaPredicted RBP39.93■■■■□ 3.98
SSSCA1-207ENST00000533115 TMPOP42166 694 aaKnown RBP39.93■■■■□ 3.98
SSSCA1-207ENST00000533115 ZNF330Q9Y3S2 320 aaPredicted RBP39.93■■■■□ 3.98
SSSCA1-207ENST00000533115 CCDC146Q8IYE0 955 aa39.92■■■■□ 3.98
SSSCA1-207ENST00000533115 KIAA1551Q9HCM1 1747 aa39.91■■■■□ 3.98
SSSCA1-207ENST00000533115 ADAMTS8Q9UP79 889 aa39.91■■■■□ 3.98
SSSCA1-207ENST00000533115 KDM3BQ7LBC6 1761 aa39.91■■■■□ 3.98
SSSCA1-207ENST00000533115 NFIXQ14938 502 aa39.9■■■■□ 3.98
SSSCA1-207ENST00000533115 NPM2Q86SE8 214 aaKnown RBP39.9■■■■□ 3.98
SSSCA1-207ENST00000533115 WWC3Q9ULE0 1092 aa39.9■■■■□ 3.98
SSSCA1-207ENST00000533115 RUNDC1Q96C34 613 aa39.89■■■■□ 3.98
SSSCA1-207ENST00000533115 A0A0G2JLW4 131 aa39.88■■■■□ 3.97
SSSCA1-207ENST00000533115 LMOD3Q0VAK6 560 aa39.88■■■■□ 3.97
SSSCA1-207ENST00000533115 TBC1D2BQ9UPU7 963 aa39.88■■■■□ 3.97
SSSCA1-207ENST00000533115 N4BP2Q86UW6 1770 aaPredicted RBP39.87■■■■□ 3.97
SSSCA1-207ENST00000533115 PIP4K2AP48426 406 aaPredicted RBP39.85■■■■□ 3.97
SSSCA1-207ENST00000533115 RRP7AQ9Y3A4 280 aaKnown RBP39.85■■■■□ 3.97
SSSCA1-207ENST00000533115 DPEP1P16444 411 aa39.84■■■■□ 3.97
SSSCA1-207ENST00000533115 EIF4A1P60842 406 aaKnown RBP39.84■■■■□ 3.97
SSSCA1-207ENST00000533115 SCN7AQ01118 1682 aa39.83■■■■□ 3.97
SSSCA1-207ENST00000533115 NEUROD2Q15784 382 aa39.82■■■■□ 3.97
SSSCA1-207ENST00000533115 GIGYF1O75420 1035 aaPredicted RBP39.81■■■■□ 3.96
SSSCA1-207ENST00000533115 AFDNP55196 1824 aaKnown RBP39.8■■■■□ 3.96
SSSCA1-207ENST00000533115 SERPINB2P05120 415 aa39.8■■■■□ 3.96
SSSCA1-207ENST00000533115 BICDL1Q6ZP65 573 aa39.8■■■■□ 3.96
SSSCA1-207ENST00000533115 DZIP3Q86Y13 1208 aaKnown RBP39.8■■■■□ 3.96
SSSCA1-207ENST00000533115 LAMB4A4D0S4 1761 aa39.79■■■■□ 3.96
SSSCA1-207ENST00000533115 NBPF26B4DH59 902 aa39.79■■■■□ 3.96
SSSCA1-207ENST00000533115 CAMTA2O94983 1202 aa39.79■■■■□ 3.96
SSSCA1-207ENST00000533115 TBC1D9BQ66K14 1250 aa39.79■■■■□ 3.96
SSSCA1-207ENST00000533115 NBPF10Q6P3W6 841 aaKnown RBP39.79■■■■□ 3.96
SSSCA1-207ENST00000533115 NBPF15Q8N660 670 aa39.79■■■■□ 3.96
SSSCA1-207ENST00000533115 TSPYL4Q9UJ04 414 aa39.79■■■■□ 3.96
SSSCA1-207ENST00000533115 NRXN2Q9P2S2 1712 aa39.79■■■■□ 3.96
SSSCA1-207ENST00000533115 ZNF784Q8NCA9 323 aaPredicted RBP39.78■■■■□ 3.96
SSSCA1-207ENST00000533115 KCNA3P22001 575 aa39.77■■■■□ 3.96
SSSCA1-207ENST00000533115 BABAM1Q9NWV8 329 aa39.77■■■■□ 3.96
SSSCA1-207ENST00000533115 BCS1LQ9Y276 419 aa39.75■■■■□ 3.95
SSSCA1-207ENST00000533115 TRIM35Q9UPQ4 493 aa39.74■■■■□ 3.95
SSSCA1-207ENST00000533115 BCORQ6W2J9 1755 aa39.74■■■■□ 3.95
SSSCA1-207ENST00000533115 BRCA1P38398 1863 aaKnown RBP39.73■■■■□ 3.95
SSSCA1-207ENST00000533115 PIM2Q9P1W9 311 aa39.72■■■■□ 3.95
SSSCA1-207ENST00000533115 CHRNA5P30532 468 aa39.71■■■■□ 3.95
SSSCA1-207ENST00000533115 CARMIL3Q8ND23 1372 aa39.7■■■■□ 3.95
SSSCA1-207ENST00000533115 CLEC4GQ6UXB4 293 aa39.69■■■■□ 3.94
SSSCA1-207ENST00000533115 SETDB2Q96T68 719 aa39.69■■■■□ 3.94
SSSCA1-207ENST00000533115 ZNF652Q9Y2D9 606 aa39.67■■■■□ 3.94
SSSCA1-207ENST00000533115 CCDC184Q52MB2 194 aa39.66■■■■□ 3.94
SSSCA1-207ENST00000533115 DALRD3Q5D0E6 543 aaKnown RBP39.65■■■■□ 3.94
SSSCA1-207ENST00000533115 CHL1O00533 1208 aa39.64■■■■□ 3.94
SSSCA1-207ENST00000533115 RGL2O15211 777 aa39.64■■■■□ 3.94
SSSCA1-207ENST00000533115 ANP32CO43423 234 aa39.63■■■■□ 3.93
SSSCA1-207ENST00000533115 APAF1O14727 1248 aa39.62■■■■□ 3.93
SSSCA1-207ENST00000533115 PRR5LQ6MZQ0 368 aa39.62■■■■□ 3.93
SSSCA1-207ENST00000533115 NGEFQ8N5V2 710 aa39.61■■■■□ 3.93
SSSCA1-207ENST00000533115 LAS1LQ9Y4W2 734 aaKnown RBP39.61■■■■□ 3.93
SSSCA1-207ENST00000533115 ERBB4Q15303 1308 aa39.61■■■■□ 3.93
SSSCA1-207ENST00000533115 ARFGEF1Q9Y6D6 1849 aa39.61■■■■□ 3.93
SSSCA1-207ENST00000533115 MYL6BP14649 208 aa39.6■■■■□ 3.93
SSSCA1-207ENST00000533115 ARHGAP27Q6ZUM4 889 aa39.59■■■■□ 3.93
SSSCA1-207ENST00000533115 C2CD5Q86YS7 1000 aa39.58■■■■□ 3.93
SSSCA1-207ENST00000533115 CNBD1Q8NA66 436 aa39.58■■■■□ 3.93
SSSCA1-207ENST00000533115 BRIP1Q9BX63 1249 aa39.58■■■■□ 3.93
SSSCA1-207ENST00000533115 H0YIN7 160 aa39.57■■■■□ 3.93
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms