RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
TRIM3-212ENST00000533064 BRPF1P55201 1214 aaPredicted RBP18.18■□□□□ 0.5
TRIM3-212ENST00000533064 LOC102724428A0A0B4J2F2 783 aa18.17■□□□□ 0.5
TRIM3-212ENST00000533064 IPO8O15397 1037 aaKnown RBP18.17■□□□□ 0.5
TRIM3-212ENST00000533064 STARD3NLO95772 234 aa18.17■□□□□ 0.5
TRIM3-212ENST00000533064 SIK1P57059 783 aa18.17■□□□□ 0.5
TRIM3-212ENST00000533064 PTF1AQ7RTS3 328 aa18.17■□□□□ 0.5
TRIM3-212ENST00000533064 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
TRIM3-212ENST00000533064 MRPL50Q8N5N7 158 aaKnown RBP18.17■□□□□ 0.5
TRIM3-212ENST00000533064 DBF4Q9UBU7 674 aaPredicted RBP18.17■□□□□ 0.5
TRIM3-212ENST00000533064 USP16Q9Y5T5 823 aa18.17■□□□□ 0.5
TRIM3-212ENST00000533064 MYH14Q7Z406 1995 aaKnown RBP18.17■□□□□ 0.5
TRIM3-212ENST00000533064 ATP6V1AP38606 617 aa18.16■□□□□ 0.5
TRIM3-212ENST00000533064 CHPF2Q9P2E5 772 aa18.15■□□□□ 0.5
TRIM3-212ENST00000533064 RGPD3A6NKT7 1758 aaPredicted RBP18.15■□□□□ 0.5
TRIM3-212ENST00000533064 RGPD4Q7Z3J3 1758 aa18.15■□□□□ 0.5
TRIM3-212ENST00000533064 IRX6P78412 446 aaPredicted RBP18.15■□□□□ 0.5
TRIM3-212ENST00000533064 DNAJC10Q8IXB1 793 aa18.15■□□□□ 0.5
TRIM3-212ENST00000533064 ERBB4Q15303 1308 aa18.14■□□□□ 0.49
TRIM3-212ENST00000533064 PLIN1O60240 522 aa18.14■□□□□ 0.49
TRIM3-212ENST00000533064 ZKSCAN2Q63HK3 967 aa18.14■□□□□ 0.49
TRIM3-212ENST00000533064 DDX21Q9NR30 783 aaKnown RBP eCLIP18.14■□□□□ 0.49
TRIM3-212ENST00000533064 NOB1Q9ULX3 412 aaKnown RBP18.14■□□□□ 0.49
TRIM3-212ENST00000533064 MS4A1P11836 297 aa18.13■□□□□ 0.49
TRIM3-212ENST00000533064 SLC4A9Q96Q91 983 aa18.13■□□□□ 0.49
TRIM3-212ENST00000533064 HYPKQ9NX55 129 aa18.13■□□□□ 0.49
TRIM3-212ENST00000533064 PTPRCP08575 1304 aa18.12■□□□□ 0.49
TRIM3-212ENST00000533064 ARHGAP45Q92619 1136 aa18.12■□□□□ 0.49
TRIM3-212ENST00000533064 CCNL1Q9UK58 526 aaPredicted RBP18.12■□□□□ 0.49
TRIM3-212ENST00000533064 RREB1Q92766 1687 aa18.11■□□□□ 0.49
TRIM3-212ENST00000533064 N4BP2Q86UW6 1770 aaPredicted RBP18.11■□□□□ 0.49
TRIM3-212ENST00000533064 MYL6BP14649 208 aa18.11■□□□□ 0.49
TRIM3-212ENST00000533064 HMGB2P26583 209 aaKnown RBP18.11■□□□□ 0.49
TRIM3-212ENST00000533064 FLIIQ13045 1269 aa18.11■□□□□ 0.49
TRIM3-212ENST00000533064 ATF7IPQ6VMQ6 1270 aa18.11■□□□□ 0.49
TRIM3-212ENST00000533064 FTSJ3Q8IY81 847 aaKnown RBP18.11■□□□□ 0.49
TRIM3-212ENST00000533064 API5Q9BZZ5 524 aaKnown RBP18.11■□□□□ 0.49
TRIM3-212ENST00000533064 APBA3O96018 575 aa18.1■□□□□ 0.49
TRIM3-212ENST00000533064 CYP19A1P11511 503 aaPredicted RBP18.1■□□□□ 0.49
TRIM3-212ENST00000533064 ANXA1P04083 346 aa18.09■□□□□ 0.49
TRIM3-212ENST00000533064 A1BGP04217 495 aa18.09■□□□□ 0.49
TRIM3-212ENST00000533064 FKBP5Q13451 457 aaPredicted RBP18.09■□□□□ 0.49
TRIM3-212ENST00000533064 NPM2Q86SE8 214 aaKnown RBP18.09■□□□□ 0.49
TRIM3-212ENST00000533064 ARFGEF2Q9Y6D5 1785 aa18.09■□□□□ 0.49
TRIM3-212ENST00000533064 SF3B2Q13435 895 aaKnown RBP18.09■□□□□ 0.49
TRIM3-212ENST00000533064 PDE3AQ14432 1141 aa18.09■□□□□ 0.49
TRIM3-212ENST00000533064 PDIA6Q15084 440 aa18.09■□□□□ 0.49
TRIM3-212ENST00000533064 G2E3Q7L622 706 aa18.09■□□□□ 0.49
TRIM3-212ENST00000533064 PHAXQ9H814 394 aaKnown RBP18.09■□□□□ 0.49
TRIM3-212ENST00000533064 C4BP0C0L5 1744 aa18.08■□□□□ 0.49
TRIM3-212ENST00000533064 AFDNP55196 1824 aaKnown RBP18.08■□□□□ 0.49
TRIM3-212ENST00000533064 PLSCR1O15162 318 aa18.08■□□□□ 0.48
TRIM3-212ENST00000533064 TRIM27P14373 513 aa18.08■□□□□ 0.48
TRIM3-212ENST00000533064 ITPK1Q13572 414 aa18.08■□□□□ 0.48
TRIM3-212ENST00000533064 PROSER3Q2NL68 480 aa18.08■□□□□ 0.48
TRIM3-212ENST00000533064 SLC27A3Q5K4L6 730 aa18.08■□□□□ 0.48
TRIM3-212ENST00000533064 DZIP1LQ8IYY4 767 aaKnown RBP18.08■□□□□ 0.48
TRIM3-212ENST00000533064 DDX58O95786 925 aaKnown RBP18.07■□□□□ 0.48
TRIM3-212ENST00000533064 CRKLP46109 303 aaKnown RBP18.07■□□□□ 0.48
TRIM3-212ENST00000533064 PIP4K2AP48426 406 aaPredicted RBP18.07■□□□□ 0.48
TRIM3-212ENST00000533064 CLUAP1Q96AJ1 413 aa18.07■□□□□ 0.48
TRIM3-212ENST00000533064 CCDC87Q9NVE4 849 aa18.07■□□□□ 0.48
TRIM3-212ENST00000533064 NUP98P52948 1817 aa18.07■□□□□ 0.48
TRIM3-212ENST00000533064 NUP188Q5SRE5 1749 aa18.06■□□□□ 0.48
TRIM3-212ENST00000533064 NBPF26B4DH59 902 aa18.06■□□□□ 0.48
TRIM3-212ENST00000533064 AIMP1Q12904 312 aaKnown RBP18.06■□□□□ 0.48
TRIM3-212ENST00000533064 NBPF14Q5TI25 921 aa18.06■□□□□ 0.48
TRIM3-212ENST00000533064 NBPF10Q6P3W6 841 aaKnown RBP18.06■□□□□ 0.48
TRIM3-212ENST00000533064 NBPF15Q8N660 670 aa18.06■□□□□ 0.48
TRIM3-212ENST00000533064 PPP4R2Q9NY27 417 aa18.06■□□□□ 0.48
TRIM3-212ENST00000533064 ZNF330Q9Y3S2 320 aaPredicted RBP18.06■□□□□ 0.48
TRIM3-212ENST00000533064 UBR3Q6ZT12 1888 aa18.05■□□□□ 0.48
TRIM3-212ENST00000533064 KCNQ4P56696 695 aa18.05■□□□□ 0.48
TRIM3-212ENST00000533064 LINC00116Q8NCU8 138 aa18.05■□□□□ 0.48
TRIM3-212ENST00000533064 XAGE3Q8WTP9 111 aa18.05■□□□□ 0.48
TRIM3-212ENST00000533064 ZBTB1Q9Y2K1 713 aa18.05■□□□□ 0.48
TRIM3-212ENST00000533064 CNTNAP4Q9C0A0 1308 aa18.04■□□□□ 0.48
TRIM3-212ENST00000533064 IL6STP40189 918 aaPredicted RBP18.04■□□□□ 0.48
TRIM3-212ENST00000533064 COPS6Q7L5N1 327 aa18.04■□□□□ 0.48
TRIM3-212ENST00000533064 ANKRD36CQ5JPF3 1778 aa18.04■□□□□ 0.48
TRIM3-212ENST00000533064 TXNRD1Q16881 649 aa18.03■□□□□ 0.48
TRIM3-212ENST00000533064 RC3H1Q5TC82 1133 aaKnown RBP18.03■□□□□ 0.48
TRIM3-212ENST00000533064 C20orf194Q5TEA3 1177 aa18.03■□□□□ 0.48
TRIM3-212ENST00000533064 PANK1Q8TE04 598 aa18.03■□□□□ 0.48
TRIM3-212ENST00000533064 ABCC4O15439 1325 aa18.03■□□□□ 0.48
TRIM3-212ENST00000533064 INTS5Q6P9B9 1019 aaKnown RBP18.03■□□□□ 0.48
TRIM3-212ENST00000533064 LRP10Q7Z4F1 713 aa18.03■□□□□ 0.48
TRIM3-212ENST00000533064 TNNQ9UQP3 1299 aa18.03■□□□□ 0.48
TRIM3-212ENST00000533064 PXDNLA1KZ92 1463 aa18.02■□□□□ 0.48
TRIM3-212ENST00000533064 PI4KAP2A4QPH2 592 aa18.02■□□□□ 0.47
TRIM3-212ENST00000533064 BAG6P46379 1132 aa18.02■□□□□ 0.47
TRIM3-212ENST00000533064 SLC4A10Q6U841 1118 aa18.02■□□□□ 0.47
TRIM3-212ENST00000533064 KSR2Q6VAB6 950 aa18.02■□□□□ 0.47
TRIM3-212ENST00000533064 KIF6Q6ZMV9 814 aa18.02■□□□□ 0.47
TRIM3-212ENST00000533064 RIC3Q7Z5B4 369 aa18.02■□□□□ 0.47
TRIM3-212ENST00000533064 PI4KAP1Q8N8J0 262 aa18.02■□□□□ 0.47
TRIM3-212ENST00000533064 ARXQ96QS3 562 aa18.02■□□□□ 0.47
TRIM3-212ENST00000533064 RLBP1P12271 317 aa18.01■□□□□ 0.47
TRIM3-212ENST00000533064 ANKRD13DQ6ZTN6 518 aa18.01■□□□□ 0.47
TRIM3-212ENST00000533064 CCDC125Q86Z20 511 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms