RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 TTC5Q8N0Z6 440 aa28.02■■■□□ 2.08
PACSIN3-209ENST00000532457 ASAP1Q9ULH1 1129 aa28.01■■■□□ 2.07
PACSIN3-209ENST00000532457 APBA3O96018 575 aa28■■■□□ 2.07
PACSIN3-209ENST00000532457 PTF1AQ7RTS3 328 aa28■■■□□ 2.07
PACSIN3-209ENST00000532457 TMEM57Q8N5G2 664 aa27.99■■■□□ 2.07
PACSIN3-209ENST00000532457 FMNL2Q96PY5 1086 aa27.99■■■□□ 2.07
PACSIN3-209ENST00000532457 STK31Q9BXU1 1019 aa27.99■■■□□ 2.07
PACSIN3-209ENST00000532457 FTSJ3Q8IY81 847 aaKnown RBP27.99■■■□□ 2.07
PACSIN3-209ENST00000532457 SMARCC1Q92922 1105 aaPredicted RBP27.99■■■□□ 2.07
PACSIN3-209ENST00000532457 CHPF2Q9P2E5 772 aa27.99■■■□□ 2.07
PACSIN3-209ENST00000532457 USP16Q9Y5T5 823 aa27.99■■■□□ 2.07
PACSIN3-209ENST00000532457 BTAF1O14981 1849 aa27.99■■■□□ 2.07
PACSIN3-209ENST00000532457 UPF1Q92900 1129 aaKnown RBP eCLIP27.98■■■□□ 2.073e-18■■■■■ 86.9
PACSIN3-209ENST00000532457 ATG3Q9NT62 314 aa27.98■■■□□ 2.07
PACSIN3-209ENST00000532457 ANXA1P04083 346 aa27.97■■■□□ 2.07
PACSIN3-209ENST00000532457 SNRPA1P09661 255 aaKnown RBP27.97■■■□□ 2.07
PACSIN3-209ENST00000532457 MVPQ14764 893 aaKnown RBP27.97■■■□□ 2.07
PACSIN3-209ENST00000532457 PHAXQ9H814 394 aaKnown RBP27.97■■■□□ 2.07
PACSIN3-209ENST00000532457 TNS1Q9HBL0 1735 aaKnown RBP27.96■■■□□ 2.07
PACSIN3-209ENST00000532457 C5P01031 1676 aa27.96■■■□□ 2.07
PACSIN3-209ENST00000532457 PAPPAQ13219 1627 aa27.96■■■□□ 2.07
PACSIN3-209ENST00000532457 KCPQ6ZWJ8 1503 aa27.96■■■□□ 2.07
PACSIN3-209ENST00000532457 PTCD1O75127 700 aaKnown RBP27.96■■■□□ 2.07
PACSIN3-209ENST00000532457 MS4A1P11836 297 aa27.96■■■□□ 2.07
PACSIN3-209ENST00000532457 BAG6P46379 1132 aa27.96■■■□□ 2.07
PACSIN3-209ENST00000532457 PLSCR1O15162 318 aa27.95■■■□□ 2.07
PACSIN3-209ENST00000532457 PROSER3Q2NL68 480 aa27.95■■■□□ 2.07
PACSIN3-209ENST00000532457 ABCC4O15439 1325 aa27.95■■■□□ 2.06
PACSIN3-209ENST00000532457 PDIA6Q15084 440 aa27.95■■■□□ 2.06
PACSIN3-209ENST00000532457 API5Q9BZZ5 524 aaKnown RBP27.95■■■□□ 2.06
PACSIN3-209ENST00000532457 UBR2Q8IWV8 1755 aa27.94■■■□□ 2.06
PACSIN3-209ENST00000532457 FLIIQ13045 1269 aa27.94■■■□□ 2.06
PACSIN3-209ENST00000532457 PTPRCP08575 1304 aa27.93■■■□□ 2.06
PACSIN3-209ENST00000532457 PALLDQ8WX93 1383 aa27.91■■■□□ 2.06
PACSIN3-209ENST00000532457 CACNA1FO60840 1977 aa27.91■■■□□ 2.06
PACSIN3-209ENST00000532457 F6X3S4 739 aa27.91■■■□□ 2.06
PACSIN3-209ENST00000532457 ITPRIPQ8IWB1 547 aa27.91■■■□□ 2.06
PACSIN3-209ENST00000532457 CCDC136Q96JN2 1154 aa27.9■■■□□ 2.06
PACSIN3-209ENST00000532457 DBF4Q9UBU7 674 aaPredicted RBP27.9■■■□□ 2.06
PACSIN3-209ENST00000532457 CHMP4AQ9BY43 222 aa27.89■■■□□ 2.06
PACSIN3-209ENST00000532457 SLC4A9Q96Q91 983 aa27.88■■■□□ 2.05
PACSIN3-209ENST00000532457 HMGB2P26583 209 aaKnown RBP27.88■■■□□ 2.05
PACSIN3-209ENST00000532457 PIP4K2AP48426 406 aaPredicted RBP27.88■■■□□ 2.05
PACSIN3-209ENST00000532457 DDX21Q9NR30 783 aaKnown RBP eCLIP27.88■■■□□ 2.05
PACSIN3-209ENST00000532457 EN1Q05925 392 aaPredicted RBP27.87■■■□□ 2.05
PACSIN3-209ENST00000532457 FKBP5Q13451 457 aaPredicted RBP27.87■■■□□ 2.05
PACSIN3-209ENST00000532457 RGPD3A6NKT7 1758 aaPredicted RBP27.87■■■□□ 2.05
PACSIN3-209ENST00000532457 RGPD4Q7Z3J3 1758 aa27.87■■■□□ 2.05
PACSIN3-209ENST00000532457 INTS3Q68E01 1043 aaKnown RBP27.86■■■□□ 2.05
PACSIN3-209ENST00000532457 RBM42Q9BTD8 480 aaKnown RBP27.86■■■□□ 2.05
PACSIN3-209ENST00000532457 SLC27A3Q5K4L6 730 aa27.85■■■□□ 2.05
PACSIN3-209ENST00000532457 LRP10Q7Z4F1 713 aa27.85■■■□□ 2.05
PACSIN3-209ENST00000532457 LOC102724428A0A0B4J2F2 783 aa27.85■■■□□ 2.05
PACSIN3-209ENST00000532457 ZBTB7BO15156 539 aaPredicted RBP27.85■■■□□ 2.05
PACSIN3-209ENST00000532457 SIK1P57059 783 aa27.85■■■□□ 2.05
PACSIN3-209ENST00000532457 DEFB132Q7Z7B7 95 aa27.85■■■□□ 2.05
PACSIN3-209ENST00000532457 DDX19BQ9UMR2 479 aa27.85■■■□□ 2.05
PACSIN3-209ENST00000532457 CAMKK2Q96RR4 588 aa27.84■■■□□ 2.05
PACSIN3-209ENST00000532457 MYL6BP14649 208 aa27.83■■■□□ 2.05
PACSIN3-209ENST00000532457 TXNRD1Q16881 649 aa27.83■■■□□ 2.05
PACSIN3-209ENST00000532457 ZBTB40Q9NUA8 1239 aa27.83■■■□□ 2.05
PACSIN3-209ENST00000532457 HYPKQ9NX55 129 aa27.83■■■□□ 2.05
PACSIN3-209ENST00000532457 PCDHB15Q9Y5E8 787 aa27.83■■■□□ 2.05
PACSIN3-209ENST00000532457 LY75O60449 1722 aa27.83■■■□□ 2.05
PACSIN3-209ENST00000532457 NBPF26B4DH59 902 aa27.83■■■□□ 2.05
PACSIN3-209ENST00000532457 A1BGP04217 495 aa27.83■■■□□ 2.05
PACSIN3-209ENST00000532457 NBPF14Q5TI25 921 aa27.83■■■□□ 2.05
PACSIN3-209ENST00000532457 NBPF10Q6P3W6 841 aaKnown RBP27.83■■■□□ 2.05
PACSIN3-209ENST00000532457 NBPF15Q8N660 670 aa27.83■■■□□ 2.05
PACSIN3-209ENST00000532457 CCNL1Q9UK58 526 aaPredicted RBP27.83■■■□□ 2.05
PACSIN3-209ENST00000532457 SLC4A10Q6U841 1118 aa27.82■■■□□ 2.04
PACSIN3-209ENST00000532457 DNAJC10Q8IXB1 793 aa27.82■■■□□ 2.04
PACSIN3-209ENST00000532457 VSIG10Q8N0Z9 540 aa27.82■■■□□ 2.04
PACSIN3-209ENST00000532457 ATP6V1AP38606 617 aa27.81■■■□□ 2.04
PACSIN3-209ENST00000532457 EZH2Q15910 746 aaKnown RBP27.81■■■□□ 2.04
PACSIN3-209ENST00000532457 SOCS7O14512 581 aa27.81■■■□□ 2.04
PACSIN3-209ENST00000532457 PI4KAP2A4QPH2 592 aa27.8■■■□□ 2.04
PACSIN3-209ENST00000532457 PI4KAP1Q8N8J0 262 aa27.8■■■□□ 2.04
PACSIN3-209ENST00000532457 ADCY9O60503 1353 aa27.79■■■□□ 2.04
PACSIN3-209ENST00000532457 AIMP1Q12904 312 aaKnown RBP27.78■■■□□ 2.04
PACSIN3-209ENST00000532457 PROM2Q8N271 834 aa27.78■■■□□ 2.04
PACSIN3-209ENST00000532457 LAMB4A4D0S4 1761 aa27.78■■■□□ 2.04
PACSIN3-209ENST00000532457 AAMPQ13685 434 aa27.78■■■□□ 2.04
PACSIN3-209ENST00000532457 TEX13AQ9BXU3 409 aaPredicted RBP27.78■■■□□ 2.04
PACSIN3-209ENST00000532457 ZNF831Q5JPB2 1677 aa27.78■■■□□ 2.04
PACSIN3-209ENST00000532457 IGHDP01880 384 aa27.77■■■□□ 2.04
PACSIN3-209ENST00000532457 COPS6Q7L5N1 327 aa27.77■■■□□ 2.04
PACSIN3-209ENST00000532457 XAGE3Q8WTP9 111 aa27.77■■■□□ 2.04
PACSIN3-209ENST00000532457 LRRC4BQ9NT99 713 aa27.75■■■□□ 2.03
PACSIN3-209ENST00000532457 CYP19A1P11511 503 aaPredicted RBP27.74■■■□□ 2.03
PACSIN3-209ENST00000532457 CCT4P50991 539 aaKnown RBP27.74■■■□□ 2.03
PACSIN3-209ENST00000532457 KSR2Q6VAB6 950 aa27.74■■■□□ 2.03
PACSIN3-209ENST00000532457 DNAAF4Q8WXU2 420 aa27.74■■■□□ 2.03
PACSIN3-209ENST00000532457 MAP3K2Q9Y2U5 619 aa27.74■■■□□ 2.03
PACSIN3-209ENST00000532457 ERBB4Q15303 1308 aa27.73■■■□□ 2.03
PACSIN3-209ENST00000532457 KDM2BQ8NHM5 1336 aa27.73■■■□□ 2.03
PACSIN3-209ENST00000532457 KCNQ4P56696 695 aa27.73■■■□□ 2.03
PACSIN3-209ENST00000532457 C1orf115Q9H7X2 142 aa27.73■■■□□ 2.03
PACSIN3-209ENST00000532457 STARD3NLO95772 234 aa27.72■■■□□ 2.03
PACSIN3-209ENST00000532457 BEND3Q5T5X7 828 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 929.1 ms