RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 SUPT16HQ9Y5B9 1047 aaKnown RBP23.05■■□□□ 1.28
PPP1CA-208ENST00000532446 RNF123Q5XPI4 1314 aa23.04■■□□□ 1.28
PPP1CA-208ENST00000532446 COL5A3P25940 1745 aaPredicted RBP23.04■■□□□ 1.28
PPP1CA-208ENST00000532446 ATP6V1AP38606 617 aa23.04■■□□□ 1.28
PPP1CA-208ENST00000532446 BAG6P46379 1132 aa23.04■■□□□ 1.28
PPP1CA-208ENST00000532446 STK31Q9BXU1 1019 aa23.04■■□□□ 1.28
PPP1CA-208ENST00000532446 ITPK1Q13572 414 aa23.03■■□□□ 1.28
PPP1CA-208ENST00000532446 TAF1LQ8IZX4 1826 aa23.02■■□□□ 1.28
PPP1CA-208ENST00000532446 STARD3NLO95772 234 aa23.02■■□□□ 1.28
PPP1CA-208ENST00000532446 SLC4A2P04920 1241 aa23.02■■□□□ 1.28
PPP1CA-208ENST00000532446 CYP19A1P11511 503 aaPredicted RBP23.02■■□□□ 1.28
PPP1CA-208ENST00000532446 CHPF2Q9P2E5 772 aa23.02■■□□□ 1.28
PPP1CA-208ENST00000532446 DBF4Q9UBU7 674 aaPredicted RBP23.02■■□□□ 1.28
PPP1CA-208ENST00000532446 ERBB4Q15303 1308 aa23.02■■□□□ 1.27
PPP1CA-208ENST00000532446 RGPD3A6NKT7 1758 aaPredicted RBP23.01■■□□□ 1.27
PPP1CA-208ENST00000532446 RGPD4Q7Z3J3 1758 aa23.01■■□□□ 1.27
PPP1CA-208ENST00000532446 PLSCR1O15162 318 aa23.01■■□□□ 1.27
PPP1CA-208ENST00000532446 APBA3O96018 575 aa23.01■■□□□ 1.27
PPP1CA-208ENST00000532446 PDIA6Q15084 440 aa23.01■■□□□ 1.27
PPP1CA-208ENST00000532446 DDX21Q9NR30 783 aaKnown RBP eCLIP23.01■■□□□ 1.27
PPP1CA-208ENST00000532446 CCNL1Q9UK58 526 aaPredicted RBP23■■□□□ 1.27
PPP1CA-208ENST00000532446 A1BGP04217 495 aa22.99■■□□□ 1.27
PPP1CA-208ENST00000532446 MYH14Q7Z406 1995 aaKnown RBP22.99■■□□□ 1.27
PPP1CA-208ENST00000532446 KIF16BQ96L93 1317 aa22.99■■□□□ 1.27
PPP1CA-208ENST00000532446 RREB1Q92766 1687 aa22.99■■□□□ 1.27
PPP1CA-208ENST00000532446 RRP1P56182 461 aaKnown RBP22.98■■□□□ 1.27
PPP1CA-208ENST00000532446 PROSER3Q2NL68 480 aa22.98■■□□□ 1.27
PPP1CA-208ENST00000532446 NBPF26B4DH59 902 aa22.98■■□□□ 1.27
PPP1CA-208ENST00000532446 ANXA1P04083 346 aa22.98■■□□□ 1.27
PPP1CA-208ENST00000532446 KCNQ4P56696 695 aa22.98■■□□□ 1.27
PPP1CA-208ENST00000532446 NBPF14Q5TI25 921 aa22.98■■□□□ 1.27
PPP1CA-208ENST00000532446 NBPF10Q6P3W6 841 aaKnown RBP22.98■■□□□ 1.27
PPP1CA-208ENST00000532446 NBPF15Q8N660 670 aa22.98■■□□□ 1.27
PPP1CA-208ENST00000532446 NOB1Q9ULX3 412 aaKnown RBP22.98■■□□□ 1.27
PPP1CA-208ENST00000532446 SLC27A3Q5K4L6 730 aa22.97■■□□□ 1.27
PPP1CA-208ENST00000532446 G2E3Q7L622 706 aa22.97■■□□□ 1.27
PPP1CA-208ENST00000532446 LRP10Q7Z4F1 713 aa22.97■■□□□ 1.27
PPP1CA-208ENST00000532446 LINC00116Q8NCU8 138 aa22.97■■□□□ 1.27
PPP1CA-208ENST00000532446 HYPKQ9NX55 129 aa22.97■■□□□ 1.27
PPP1CA-208ENST00000532446 EN1Q05925 392 aaPredicted RBP22.96■■□□□ 1.27
PPP1CA-208ENST00000532446 PROM2Q8N271 834 aa22.96■■□□□ 1.27
PPP1CA-208ENST00000532446 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.96■■□□□ 1.27
PPP1CA-208ENST00000532446 FRAT1Q92837 279 aaPredicted RBP22.96■■□□□ 1.27
PPP1CA-208ENST00000532446 LRRC4BQ9NT99 713 aa22.96■■□□□ 1.27
PPP1CA-208ENST00000532446 PLIN1O60240 522 aa22.95■■□□□ 1.26
PPP1CA-208ENST00000532446 CRKLP46109 303 aaKnown RBP22.95■■□□□ 1.26
PPP1CA-208ENST00000532446 PIP4K2AP48426 406 aaPredicted RBP22.95■■□□□ 1.26
PPP1CA-208ENST00000532446 TXNRD1Q16881 649 aa22.95■■□□□ 1.26
PPP1CA-208ENST00000532446 INTS5Q6P9B9 1019 aaKnown RBP22.95■■□□□ 1.26
PPP1CA-208ENST00000532446 PHAXQ9H814 394 aaKnown RBP22.95■■□□□ 1.26
PPP1CA-208ENST00000532446 IPO8O15397 1037 aaKnown RBP22.94■■□□□ 1.26
PPP1CA-208ENST00000532446 MYL6BP14649 208 aa22.94■■□□□ 1.26
PPP1CA-208ENST00000532446 FLIIQ13045 1269 aa22.94■■□□□ 1.26
PPP1CA-208ENST00000532446 ARHGAP45Q92619 1136 aa22.94■■□□□ 1.26
PPP1CA-208ENST00000532446 CCDC87Q9NVE4 849 aa22.94■■□□□ 1.26
PPP1CA-208ENST00000532446 ZKSCAN2Q63HK3 967 aa22.93■■□□□ 1.26
PPP1CA-208ENST00000532446 ZBTB1Q9Y2K1 713 aa22.93■■□□□ 1.26
PPP1CA-208ENST00000532446 PTPRCP08575 1304 aa22.93■■□□□ 1.26
PPP1CA-208ENST00000532446 CNTNAP4Q9C0A0 1308 aa22.93■■□□□ 1.26
PPP1CA-208ENST00000532446 C4BP0C0L5 1744 aa22.92■■□□□ 1.26
PPP1CA-208ENST00000532446 RC3H1Q5TC82 1133 aaKnown RBP22.92■■□□□ 1.26
PPP1CA-208ENST00000532446 ATF7IPQ6VMQ6 1270 aa22.92■■□□□ 1.26
PPP1CA-208ENST00000532446 CANXP27824 592 aaKnown RBP22.92■■□□□ 1.26
PPP1CA-208ENST00000532446 TRIM27P14373 513 aa22.91■■□□□ 1.26
PPP1CA-208ENST00000532446 IL6STP40189 918 aaPredicted RBP22.9■■□□□ 1.26
PPP1CA-208ENST00000532446 XAGE3Q8WTP9 111 aa22.9■■□□□ 1.26
PPP1CA-208ENST00000532446 CAMKK2Q96RR4 588 aa22.9■■□□□ 1.26
PPP1CA-208ENST00000532446 HMGB2P26583 209 aaKnown RBP22.89■■□□□ 1.25
PPP1CA-208ENST00000532446 FKBP5Q13451 457 aaPredicted RBP22.89■■□□□ 1.25
PPP1CA-208ENST00000532446 COPS6Q7L5N1 327 aa22.89■■□□□ 1.25
PPP1CA-208ENST00000532446 API5Q9BZZ5 524 aaKnown RBP22.89■■□□□ 1.25
PPP1CA-208ENST00000532446 TNNQ9UQP3 1299 aa22.89■■□□□ 1.25
PPP1CA-208ENST00000532446 EIF5P55010 431 aaKnown RBP22.88■■□□□ 1.25
PPP1CA-208ENST00000532446 EZH2Q15910 746 aaKnown RBP22.88■■□□□ 1.25
PPP1CA-208ENST00000532446 AIMP1Q12904 312 aaKnown RBP22.87■■□□□ 1.25
PPP1CA-208ENST00000532446 PDE3AQ14432 1141 aa22.87■■□□□ 1.25
PPP1CA-208ENST00000532446 C20orf194Q5TEA3 1177 aa22.86■■□□□ 1.25
PPP1CA-208ENST00000532446 MS4A1P11836 297 aa22.85■■□□□ 1.25
PPP1CA-208ENST00000532446 DZIP1LQ8IYY4 767 aaKnown RBP22.85■■□□□ 1.25
PPP1CA-208ENST00000532446 CLUAP1Q96AJ1 413 aa22.85■■□□□ 1.25
PPP1CA-208ENST00000532446 UBR3Q6ZT12 1888 aa22.85■■□□□ 1.25
PPP1CA-208ENST00000532446 ADCY9O60503 1353 aa22.85■■□□□ 1.25
PPP1CA-208ENST00000532446 ABCC4O15439 1325 aa22.85■■□□□ 1.25
PPP1CA-208ENST00000532446 RPS6KA4O75676 772 aa22.85■■□□□ 1.25
PPP1CA-208ENST00000532446 DDX58O95786 925 aaKnown RBP22.85■■□□□ 1.25
PPP1CA-208ENST00000532446 RLBP1P12271 317 aa22.85■■□□□ 1.25
PPP1CA-208ENST00000532446 KSR2Q6VAB6 950 aa22.85■■□□□ 1.25
PPP1CA-208ENST00000532446 TTLL7Q6ZT98 887 aa22.85■■□□□ 1.25
PPP1CA-208ENST00000532446 NUP188Q5SRE5 1749 aa22.84■■□□□ 1.25
PPP1CA-208ENST00000532446 SRCAPQ6ZRS2 3230 aa22.84■■□□□ 1.25
PPP1CA-208ENST00000532446 PI4KAP2A4QPH2 592 aa22.84■■□□□ 1.25
PPP1CA-208ENST00000532446 F6X3S4 739 aa22.84■■□□□ 1.25
PPP1CA-208ENST00000532446 PI4KAP1Q8N8J0 262 aa22.84■■□□□ 1.25
PPP1CA-208ENST00000532446 PANK1Q8TE04 598 aa22.84■■□□□ 1.25
PPP1CA-208ENST00000532446 ZNF330Q9Y3S2 320 aaPredicted RBP22.84■■□□□ 1.25
PPP1CA-208ENST00000532446 ARFGEF2Q9Y6D5 1785 aa22.84■■□□□ 1.25
PPP1CA-208ENST00000532446 N4BP2Q86UW6 1770 aaPredicted RBP22.83■■□□□ 1.25
PPP1CA-208ENST00000532446 GNPATO15228 680 aa22.83■■□□□ 1.25
PPP1CA-208ENST00000532446 ANKRD13DQ6ZTN6 518 aa22.83■■□□□ 1.25
PPP1CA-208ENST00000532446 FTSJ3Q8IY81 847 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms