RNA–Protein interactions for RNA: ENST00000532330.5

BRPF3-209, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-209ENST00000532330 SSH3Q8TE77 659 aa13.54□□□□□ -0.24
BRPF3-209ENST00000532330 CRYBG1Q9Y4K1 1723 aa13.54□□□□□ -0.24
BRPF3-209ENST00000532330 NKX1-1Q15270 411 aaPredicted RBP13.54□□□□□ -0.24
BRPF3-209ENST00000532330 PLEKHM2Q8IWE5 1019 aa13.54□□□□□ -0.24
BRPF3-209ENST00000532330 NHSL1Q5SYE7 1610 aa13.54□□□□□ -0.24
BRPF3-209ENST00000532330 SNX21Q969T3 373 aa13.54□□□□□ -0.24
BRPF3-209ENST00000532330 F6X3S4 739 aa13.53□□□□□ -0.24
BRPF3-209ENST00000532330 MTX1Q13505 466 aa13.53□□□□□ -0.24
BRPF3-209ENST00000532330 RIC3Q7Z5B4 369 aa13.53□□□□□ -0.24
BRPF3-209ENST00000532330 ZNF335Q9H4Z2 1342 aaPredicted RBP13.53□□□□□ -0.24
BRPF3-209ENST00000532330 BEND3Q5T5X7 828 aa13.53□□□□□ -0.24
BRPF3-209ENST00000532330 SCN11AQ9UI33 1791 aa13.52□□□□□ -0.24
BRPF3-209ENST00000532330 OS9Q13438 667 aaPredicted RBP13.52□□□□□ -0.24
BRPF3-209ENST00000532330 PI4KAP2A4QPH2 592 aa13.52□□□□□ -0.25
BRPF3-209ENST00000532330 RABEP1Q15276 862 aa13.52□□□□□ -0.25
BRPF3-209ENST00000532330 PI4KAP1Q8N8J0 262 aa13.52□□□□□ -0.25
BRPF3-209ENST00000532330 LRRFIP2Q9Y608 721 aaKnown RBP13.52□□□□□ -0.25
BRPF3-209ENST00000532330 STAP2Q9UGK3 403 aa13.51□□□□□ -0.25
BRPF3-209ENST00000532330 SIPA1L3O60292 1781 aaPredicted RBP13.51□□□□□ -0.25
BRPF3-209ENST00000532330 HIP1O00291 1037 aa13.51□□□□□ -0.25
BRPF3-209ENST00000532330 USP44Q9H0E7 712 aa13.51□□□□□ -0.25
BRPF3-209ENST00000532330 XIRP1Q702N8 1843 aaKnown RBP13.51□□□□□ -0.25
BRPF3-209ENST00000532330 PLEKHG5O94827 1062 aa13.51□□□□□ -0.25
BRPF3-209ENST00000532330 POLA2Q14181 598 aa13.51□□□□□ -0.25
BRPF3-209ENST00000532330 TICAM2Q86XR7 235 aa13.51□□□□□ -0.25
BRPF3-209ENST00000532330 NECTIN2Q92692 538 aa13.51□□□□□ -0.25
BRPF3-209ENST00000532330 CIZ1Q9ULV3 898 aaPredicted RBP13.51□□□□□ -0.25
BRPF3-209ENST00000532330 COL5A2P05997 1499 aaPredicted RBP13.51□□□□□ -0.25
BRPF3-209ENST00000532330 RGPD2P0DJD1 1756 aa13.51□□□□□ -0.25
BRPF3-209ENST00000532330 SKAP1Q86WV1 359 aa13.5□□□□□ -0.25
BRPF3-209ENST00000532330 MAP3K2Q9Y2U5 619 aa13.5□□□□□ -0.25
BRPF3-209ENST00000532330 TTC41PQ6P2S7 1318 aa13.5□□□□□ -0.25
BRPF3-209ENST00000532330 COL15A1P39059 1388 aa13.5□□□□□ -0.25
BRPF3-209ENST00000532330 MX1P20591 662 aa13.5□□□□□ -0.25
BRPF3-209ENST00000532330 RUFY2Q8WXA3 655 aa13.5□□□□□ -0.25
BRPF3-209ENST00000532330 MEGF6O75095 1541 aa13.5□□□□□ -0.25
BRPF3-209ENST00000532330 MCM2P49736 904 aa13.5□□□□□ -0.25
BRPF3-209ENST00000532330 UTYO14607 1347 aa13.5□□□□□ -0.25
BRPF3-209ENST00000532330 CHRNA2Q15822 529 aa13.49□□□□□ -0.25
BRPF3-209ENST00000532330 CLASRPQ8N2M8 674 aaKnown RBP13.49□□□□□ -0.25
BRPF3-209ENST00000532330 AHDC1Q5TGY3 1603 aaPredicted RBP13.49□□□□□ -0.25
BRPF3-209ENST00000532330 G3BP1Q13283 466 aaKnown RBP eCLIP13.49□□□□□ -0.25
BRPF3-209ENST00000532330 METTL22Q9BUU2 404 aaPredicted RBP13.49□□□□□ -0.25
BRPF3-209ENST00000532330 KDM6AO15550 1401 aaPredicted RBP13.49□□□□□ -0.25
BRPF3-209ENST00000532330 COL14A1Q05707 1796 aaKnown RBP13.49□□□□□ -0.25
BRPF3-209ENST00000532330 GRM8O00222 908 aa13.49□□□□□ -0.25
BRPF3-209ENST00000532330 SURF6O75683 361 aaKnown RBP13.49□□□□□ -0.25
BRPF3-209ENST00000532330 PDE1AP54750 535 aa13.49□□□□□ -0.25
BRPF3-209ENST00000532330 VSIG10Q8N0Z9 540 aa13.49□□□□□ -0.25
BRPF3-209ENST00000532330 SRGAP3O43295 1099 aa13.48□□□□□ -0.25
BRPF3-209ENST00000532330 TBC1D9Q6ZT07 1266 aa13.48□□□□□ -0.25
BRPF3-209ENST00000532330 ST18O60284 1047 aa13.48□□□□□ -0.25
BRPF3-209ENST00000532330 CNTROBQ8N137 903 aa13.48□□□□□ -0.25
BRPF3-209ENST00000532330 NFATC2IPQ8NCF5 419 aa13.48□□□□□ -0.25
BRPF3-209ENST00000532330 CABLES1Q8TDN4 633 aa13.48□□□□□ -0.25
BRPF3-209ENST00000532330 PHAXQ9H814 394 aaKnown RBP13.48□□□□□ -0.25
BRPF3-209ENST00000532330 THRAP3Q9Y2W1 955 aaKnown RBP13.48□□□□□ -0.25
BRPF3-209ENST00000532330 PPP1R42Q7Z4L9 355 aa13.47□□□□□ -0.25
BRPF3-209ENST00000532330 PLBD2Q8NHP8 589 aa13.47□□□□□ -0.25
BRPF3-209ENST00000532330 ANKRD13DQ6ZTN6 518 aa13.47□□□□□ -0.25
BRPF3-209ENST00000532330 TMOD3Q9NYL9 352 aa13.47□□□□□ -0.25
BRPF3-209ENST00000532330 CHMP5Q9NZZ3 219 aa13.47□□□□□ -0.25
BRPF3-209ENST00000532330 GLRX3O76003 335 aaKnown RBP13.47□□□□□ -0.25
BRPF3-209ENST00000532330 HSP90AA1P07900 732 aaKnown RBP13.47□□□□□ -0.25
BRPF3-209ENST00000532330 RGPD5Q99666 1765 aa13.46□□□□□ -0.25
BRPF3-209ENST00000532330 ANAPC15P60006 121 aa13.46□□□□□ -0.25
BRPF3-209ENST00000532330 HSP90AB3PQ58FF7 597 aa13.46□□□□□ -0.25
BRPF3-209ENST00000532330 ADCY9O60503 1353 aa13.46□□□□□ -0.25
BRPF3-209ENST00000532330 HSP90B1P14625 803 aaKnown RBP13.46□□□□□ -0.26
BRPF3-209ENST00000532330 CYP27B1O15528 508 aa13.45□□□□□ -0.26
BRPF3-209ENST00000532330 STARD3NLO95772 234 aa13.45□□□□□ -0.26
BRPF3-209ENST00000532330 RHPN1Q8TCX5 695 aa13.45□□□□□ -0.26
BRPF3-209ENST00000532330 IFIT2P09913 472 aaKnown RBP13.45□□□□□ -0.26
BRPF3-209ENST00000532330 DDX17Q92841 729 aaKnown RBP13.45□□□□□ -0.26
BRPF3-209ENST00000532330 USP42Q9H9J4 1324 aaKnown RBP13.45□□□□□ -0.26
BRPF3-209ENST00000532330 TOM1O60784 492 aa13.44□□□□□ -0.26
BRPF3-209ENST00000532330 LAMB4A4D0S4 1761 aa13.44□□□□□ -0.26
BRPF3-209ENST00000532330 KIAA1211Q6ZU35 1233 aa13.44□□□□□ -0.26
BRPF3-209ENST00000532330 ABCA3Q99758 1704 aa13.44□□□□□ -0.26
BRPF3-209ENST00000532330 COL22A1Q8NFW1 1626 aaPredicted RBP13.44□□□□□ -0.26
BRPF3-209ENST00000532330 KCNQ3O43525 872 aa13.44□□□□□ -0.26
BRPF3-209ENST00000532330 HMGB2P26583 209 aaKnown RBP13.44□□□□□ -0.26
BRPF3-209ENST00000532330 ZNF496Q96IT1 587 aaPredicted RBP13.44□□□□□ -0.26
BRPF3-209ENST00000532330 SDSP20132 328 aa13.43□□□□□ -0.26
BRPF3-209ENST00000532330 KIF6Q6ZMV9 814 aa13.43□□□□□ -0.26
BRPF3-209ENST00000532330 XAGE3Q8WTP9 111 aa13.43□□□□□ -0.26
BRPF3-209ENST00000532330 STRN4Q9NRL3 753 aa13.43□□□□□ -0.26
BRPF3-209ENST00000532330 EXOC6BQ9Y2D4 811 aa13.43□□□□□ -0.26
BRPF3-209ENST00000532330 LRP6O75581 1613 aa13.43□□□□□ -0.26
BRPF3-209ENST00000532330 TRIM6-TRIM34B2RNG4 842 aa13.43□□□□□ -0.26
BRPF3-209ENST00000532330 LRRFIP1Q32MZ4 808 aaKnown RBP13.43□□□□□ -0.26
BRPF3-209ENST00000532330 EXOC5O00471 708 aa13.42□□□□□ -0.26
BRPF3-209ENST00000532330 SEC24BO95487 1268 aa13.42□□□□□ -0.26
BRPF3-209ENST00000532330 FBXO3Q9UK99 471 aa13.42□□□□□ -0.26
BRPF3-209ENST00000532330 APBB1O00213 710 aa13.42□□□□□ -0.26
BRPF3-209ENST00000532330 COPS6Q7L5N1 327 aa13.42□□□□□ -0.26
BRPF3-209ENST00000532330 CWC22Q9HCG8 908 aaKnown RBP13.42□□□□□ -0.26
BRPF3-209ENST00000532330 GOLGA6L22H0YM25 854 aa13.41□□□□□ -0.26
BRPF3-209ENST00000532330 GCKRQ14397 625 aa13.41□□□□□ -0.26
BRPF3-209ENST00000532330 CCDC191Q8NCU4 936 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms