RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 PPP1R42Q7Z4L9 355 aa17.14■□□□□ 0.33
LRRK1-209ENST00000532145 UPF3BQ9BZI7 483 aaKnown RBP17.14■□□□□ 0.33
LRRK1-209ENST00000532145 PHAXQ9H814 394 aaKnown RBP17.14■□□□□ 0.33
LRRK1-209ENST00000532145 PI4K2BQ8TCG2 481 aa17.13■□□□□ 0.33
LRRK1-209ENST00000532145 CEBPAP49715 358 aaPredicted RBP17.13■□□□□ 0.33
LRRK1-209ENST00000532145 RRP9O43818 475 aaKnown RBP17.12■□□□□ 0.33
LRRK1-209ENST00000532145 RHPN1Q8TCX5 695 aa17.12■□□□□ 0.33
LRRK1-209ENST00000532145 SURF6O75683 361 aaKnown RBP17.12■□□□□ 0.33
LRRK1-209ENST00000532145 NUTM1Q86Y26 1132 aa17.12■□□□□ 0.33
LRRK1-209ENST00000532145 SGSM2O43147 1006 aa17.11■□□□□ 0.33
LRRK1-209ENST00000532145 KIF1BPQ96EK5 621 aa17.11■□□□□ 0.33
LRRK1-209ENST00000532145 RAD50Q92878 1312 aa17.11■□□□□ 0.33
LRRK1-209ENST00000532145 ZNF500O60304 480 aaPredicted RBP17.11■□□□□ 0.33
LRRK1-209ENST00000532145 HOXB7P09629 217 aa17.11■□□□□ 0.33
LRRK1-209ENST00000532145 NOL8Q76FK4 1167 aaKnown RBP17.11■□□□□ 0.33
LRRK1-209ENST00000532145 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.11■□□□□ 0.33
LRRK1-209ENST00000532145 NUTM2GQ5VZR2 741 aa17.11■□□□□ 0.33
LRRK1-209ENST00000532145 ABTB2Q8N961 1025 aa17.11■□□□□ 0.33
LRRK1-209ENST00000532145 WDR33Q9C0J8 1336 aaKnown RBP17.11■□□□□ 0.33
LRRK1-209ENST00000532145 MED1Q15648 1581 aaPredicted RBP17.1■□□□□ 0.33
LRRK1-209ENST00000532145 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.1■□□□□ 0.33
LRRK1-209ENST00000532145 SRGAP3O43295 1099 aa17.1■□□□□ 0.33
LRRK1-209ENST00000532145 KIAA1211Q6ZU35 1233 aa17.1■□□□□ 0.33
LRRK1-209ENST00000532145 SYAP1Q96A49 352 aaPredicted RBP17.1■□□□□ 0.33
LRRK1-209ENST00000532145 TERF1P54274 439 aa17.09■□□□□ 0.33
LRRK1-209ENST00000532145 EIF4A1P60842 406 aaKnown RBP17.09■□□□□ 0.33
LRRK1-209ENST00000532145 LTV1Q96GA3 475 aaPredicted RBP17.09■□□□□ 0.33
LRRK1-209ENST00000532145 CHMP4AQ9BY43 222 aa17.09■□□□□ 0.33
LRRK1-209ENST00000532145 NBPF7P0C2Y1 421 aaPredicted RBP17.09■□□□□ 0.33
LRRK1-209ENST00000532145 MCM5P33992 734 aa17.09■□□□□ 0.33
LRRK1-209ENST00000532145 HSP90AA2PQ14568 343 aaPredicted RBP17.09■□□□□ 0.33
LRRK1-209ENST00000532145 BEND3Q5T5X7 828 aa17.09■□□□□ 0.33
LRRK1-209ENST00000532145 USP42Q9H9J4 1324 aaKnown RBP17.08■□□□□ 0.33
LRRK1-209ENST00000532145 TTC14Q96N46 770 aa17.08■□□□□ 0.33
LRRK1-209ENST00000532145 LSG1Q9H089 658 aaKnown RBP17.08■□□□□ 0.33
LRRK1-209ENST00000532145 ZKSCAN5Q9Y2L8 839 aa17.08■□□□□ 0.33
LRRK1-209ENST00000532145 CNTROBQ8N137 903 aa17.08■□□□□ 0.32
LRRK1-209ENST00000532145 THEMISQ8N1K5 641 aaPredicted RBP17.08■□□□□ 0.32
LRRK1-209ENST00000532145 TMEM87AQ8NBN3 555 aa17.08■□□□□ 0.32
LRRK1-209ENST00000532145 SNX14Q9Y5W7 946 aa17.08■□□□□ 0.32
LRRK1-209ENST00000532145 DNAAF4Q8WXU2 420 aa17.07■□□□□ 0.32
LRRK1-209ENST00000532145 HSP90AB4PQ58FF6 505 aa17.07■□□□□ 0.32
LRRK1-209ENST00000532145 USHBP1Q8N6Y0 703 aa17.07■□□□□ 0.32
LRRK1-209ENST00000532145 RPAP1Q9BWH6 1393 aaPredicted RBP17.07■□□□□ 0.32
LRRK1-209ENST00000532145 CRYBG1Q9Y4K1 1723 aa17.06■□□□□ 0.32
LRRK1-209ENST00000532145 PHF14O94880 888 aa17.06■□□□□ 0.32
LRRK1-209ENST00000532145 KCNA6P17658 529 aa17.06■□□□□ 0.32
LRRK1-209ENST00000532145 TSPY26PQ9H489 355 aa17.06■□□□□ 0.32
LRRK1-209ENST00000532145 PI4KAP2A4QPH2 592 aa17.06■□□□□ 0.32
LRRK1-209ENST00000532145 MAP4K4O95819 1239 aaPredicted RBP17.06■□□□□ 0.32
LRRK1-209ENST00000532145 EIF2S2P20042 333 aaKnown RBP17.06■□□□□ 0.32
LRRK1-209ENST00000532145 USP48Q86UV5 1035 aa17.06■□□□□ 0.32
LRRK1-209ENST00000532145 PI4KAP1Q8N8J0 262 aa17.06■□□□□ 0.32
LRRK1-209ENST00000532145 IP6K1Q92551 441 aa17.06■□□□□ 0.32
LRRK1-209ENST00000532145 CHPF2Q9P2E5 772 aa17.06■□□□□ 0.32
LRRK1-209ENST00000532145 TTC41PQ6P2S7 1318 aa17.06■□□□□ 0.32
LRRK1-209ENST00000532145 GADD45BO75293 160 aaPredicted RBP17.05■□□□□ 0.32
LRRK1-209ENST00000532145 MTX1Q13505 466 aa17.05■□□□□ 0.32
LRRK1-209ENST00000532145 CCDC39Q9UFE4 941 aa17.05■□□□□ 0.32
LRRK1-209ENST00000532145 RASEFQ8IZ41 740 aa17.05■□□□□ 0.32
LRRK1-209ENST00000532145 RNF214Q8ND24 703 aa17.05■□□□□ 0.32
LRRK1-209ENST00000532145 LGR6Q9HBX8 967 aa17.05■□□□□ 0.32
LRRK1-209ENST00000532145 KDM3BQ7LBC6 1761 aa17.04■□□□□ 0.32
LRRK1-209ENST00000532145 GLRX3O76003 335 aaKnown RBP17.04■□□□□ 0.32
LRRK1-209ENST00000532145 AK2P54819 239 aa17.04■□□□□ 0.32
LRRK1-209ENST00000532145 NBPF6Q5VWK0 638 aa17.04■□□□□ 0.32
LRRK1-209ENST00000532145 NBPF4Q96M43 638 aa17.04■□□□□ 0.32
LRRK1-209ENST00000532145 GDPD2Q9HCC8 539 aa17.04■□□□□ 0.32
LRRK1-209ENST00000532145 LIMCH1Q9UPQ0 1083 aa17.04■□□□□ 0.32
LRRK1-209ENST00000532145 ADCY9O60503 1353 aa17.03■□□□□ 0.32
LRRK1-209ENST00000532145 RUFY3Q7L099 469 aa17.03■□□□□ 0.32
LRRK1-209ENST00000532145 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.03■□□□□ 0.32
LRRK1-209ENST00000532145 ZSCAN22P10073 491 aaPredicted RBP17.02■□□□□ 0.32
LRRK1-209ENST00000532145 CWC27Q6UX04 472 aaKnown RBP17.02■□□□□ 0.32
LRRK1-209ENST00000532145 FAM184AQ8NB25 1140 aa17.02■□□□□ 0.32
LRRK1-209ENST00000532145 NFAT5O94916 1531 aa17.02■□□□□ 0.32
LRRK1-209ENST00000532145 LTN1O94822 1766 aa17.02■□□□□ 0.32
LRRK1-209ENST00000532145 FOXD4L6Q3SYB3 417 aaPredicted RBP17.02■□□□□ 0.31
LRRK1-209ENST00000532145 FOXD4L3Q6VB84 417 aaPredicted RBP17.02■□□□□ 0.31
LRRK1-209ENST00000532145 KCNQ3O43525 872 aa17.01■□□□□ 0.31
LRRK1-209ENST00000532145 STX6O43752 255 aa17■□□□□ 0.31
LRRK1-209ENST00000532145 SYT1P21579 422 aa17■□□□□ 0.31
LRRK1-209ENST00000532145 XPCQ01831 940 aaPredicted RBP17■□□□□ 0.31
LRRK1-209ENST00000532145 CSPP1Q1MSJ5 1256 aa17■□□□□ 0.31
LRRK1-209ENST00000532145 AKAP4Q5JQC9 854 aa17■□□□□ 0.31
LRRK1-209ENST00000532145 PHF8Q9UPP1 1060 aa17■□□□□ 0.31
LRRK1-209ENST00000532145 UVSSAQ2YD98 709 aa17■□□□□ 0.31
LRRK1-209ENST00000532145 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
LRRK1-209ENST00000532145 CLASRPQ8N2M8 674 aaKnown RBP17■□□□□ 0.31
LRRK1-209ENST00000532145 RUFY2Q8WXA3 655 aa17■□□□□ 0.31
LRRK1-209ENST00000532145 HYPKQ9NX55 129 aa17■□□□□ 0.31
LRRK1-209ENST00000532145 DBF4Q9UBU7 674 aaPredicted RBP17■□□□□ 0.31
LRRK1-209ENST00000532145 SPG7Q9UQ90 795 aa17■□□□□ 0.31
LRRK1-209ENST00000532145 ADGRL3Q9HAR2 1447 aa17■□□□□ 0.31
LRRK1-209ENST00000532145 BTBD11A6QL63 1104 aa17■□□□□ 0.31
LRRK1-209ENST00000532145 CCDC183Q5T5S1 534 aa17■□□□□ 0.31
LRRK1-209ENST00000532145 KLHL34Q8N239 644 aa17■□□□□ 0.31
LRRK1-209ENST00000532145 KCNB2Q92953 911 aa17■□□□□ 0.31
LRRK1-209ENST00000532145 TEFQ10587 303 aa16.99■□□□□ 0.31
LRRK1-209ENST00000532145 C14orf37Q86TY3 774 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms