RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 MAPRE1Q15691 268 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-222ENST00000531967 TMEM106CQ9BVX2 250 aa6.67□□□□□ -1.34
ECHDC1-222ENST00000531967 EXOSC10Q01780 885 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-222ENST00000531967 PLCB3Q01970 1234 aa6.67□□□□□ -1.34
ECHDC1-222ENST00000531967 KANSL2Q9H9L4 492 aa6.67□□□□□ -1.34
ECHDC1-222ENST00000531967 NDUFB5O43674 189 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 MASP1P48740 699 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 MTMR2Q13614 643 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 PPP4R4Q6NUP7 873 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 CAPN12Q6ZSI9 719 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 KIAA0907Q7Z7F0 614 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 SH3TC2Q8TF17 1288 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 SETDB2Q96T68 719 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 SNTG2Q9NY99 539 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 SIRPGQ9P1W8 387 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 KLF15Q9UIH9 416 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 TSPAN6O43657 245 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 DKK1O94907 266 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 COL6A1P12109 1028 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 HCLS1P14317 486 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 PAF1Q8N7H5 531 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 ZHX3Q9H4I2 956 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 DNAAF2Q9NVR5 837 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 RPGRIP1LQ68CZ1 1315 aa6.66□□□□□ -1.34
ECHDC1-222ENST00000531967 RCCD1A6NED2 376 aa6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 ZRANB2O95218 330 aaKnown RBP eCLIP6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 BPNT1O95861 308 aa6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 MYL1P05976 194 aa6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 FAM193AP78312 1265 aa6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 ATP2B2Q01814 1243 aa6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 PPP2R5AQ15172 486 aa6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 NFE2Q16621 373 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 DPY19L2Q6NUT2 758 aa6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 SLAIN1Q8ND83 568 aa6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 TMC1Q8TDI8 760 aa6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 APPBP2Q92624 585 aa6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 CRELD1Q96HD1 420 aa6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 RAPGEF1Q13905 1077 aa6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 BRDTQ58F21 947 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 SVIPQ8NHG7 77 aa6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 CERKQ8TCT0 537 aa6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 RUNDC1Q96C34 613 aa6.65□□□□□ -1.34
ECHDC1-222ENST00000531967 ZBBXA8MT70 800 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 FAM163BP0C2L3 166 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 RASSF7Q02833 373 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 ZKSCAN2Q63HK3 967 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 CCDC174Q6PII3 467 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 PLPP7Q8NBV4 271 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 NEUROD4Q9HD90 331 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 NAP1L2Q9ULW6 460 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 NOD1Q9Y239 953 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 PCDHGA10Q9Y5H3 936 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 CTSHP09668 335 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 CDKN1CP49918 316 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 RASA3Q14644 834 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 C10orf62Q5T681 223 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 SIX5Q8N196 739 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 NEUROD6Q96NK8 337 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 DEPDC7Q96QD5 511 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 ZNF408Q9H9D4 720 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 CNTN3Q9P232 1028 aa6.64□□□□□ -1.35
ECHDC1-222ENST00000531967 FAM221BA6H8Z2 402 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 NPHP1O15259 732 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 TIMM44O43615 452 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 FAM13AO94988 1023 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 LDHCP07864 332 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 NPR3P17342 541 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 ATP1A2P50993 1020 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 SEC13P55735 322 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 GUCA2AQ02747 115 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 PAK2Q13177 524 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 CCDC184Q52MB2 194 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 CHADLQ6NUI6 762 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 GET4Q7L5D6 327 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 HELQQ8TDG4 1101 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 KIAA1024Q9UPX6 916 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 LZTS1Q9Y250 596 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 ESYT3A0FGR9 886 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 PTPN12Q05209 780 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 EML3Q32P44 896 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 L1TD1Q5T7N2 865 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 TRIM50Q86XT4 487 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 GPRASP2Q96D09 838 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 ENAMQ9NRM1 1142 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 ERBB3P21860 1342 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 CDC27P30260 824 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 USP46P62068 366 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 HS2ST1Q7LGA3 356 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 JAMLQ86YT9 394 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 ENOX1Q8TC92 643 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 DMRTB1Q96MA1 342 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 CITED4Q96RK1 184 aa6.63□□□□□ -1.35
ECHDC1-222ENST00000531967 TBX3O15119 743 aa6.62□□□□□ -1.35
ECHDC1-222ENST00000531967 LGR5O75473 907 aa6.62□□□□□ -1.35
ECHDC1-222ENST00000531967 IGHA2P01877 340 aa6.62□□□□□ -1.35
ECHDC1-222ENST00000531967 HOMER1Q86YM7 354 aa6.62□□□□□ -1.35
ECHDC1-222ENST00000531967 CREBRFQ8IUR6 639 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms