RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 PLEKHO1Q53GL0 409 aaPredicted RBP12.4□□□□□ -0.42
USF1-210ENST00000531842 CCDC24Q8N4L8 307 aa12.4□□□□□ -0.42
USF1-210ENST00000531842 SMC1BQ8NDV3 1235 aa12.4□□□□□ -0.42
USF1-210ENST00000531842 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.42
USF1-210ENST00000531842 DICER1Q9UPY3 1922 aaKnown RBP12.39□□□□□ -0.43
USF1-210ENST00000531842 POTECB2RU33 542 aa12.39□□□□□ -0.43
USF1-210ENST00000531842 SLC24A1O60721 1099 aa12.39□□□□□ -0.43
USF1-210ENST00000531842 NFIXQ14938 502 aa12.39□□□□□ -0.43
USF1-210ENST00000531842 BCL2L12Q9HB09 334 aa12.39□□□□□ -0.43
USF1-210ENST00000531842 LGR6Q9HBX8 967 aa12.39□□□□□ -0.43
USF1-210ENST00000531842 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
USF1-210ENST00000531842 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
USF1-210ENST00000531842 TRIM26Q12899 539 aaPredicted RBP12.38□□□□□ -0.43
USF1-210ENST00000531842 CDCA8Q53HL2 280 aa12.38□□□□□ -0.43
USF1-210ENST00000531842 FER1L6Q2WGJ9 1857 aa12.38□□□□□ -0.43
USF1-210ENST00000531842 NFKBIEO00221 500 aa12.37□□□□□ -0.43
USF1-210ENST00000531842 SULT6B1Q6IMI4 303 aa12.37□□□□□ -0.43
USF1-210ENST00000531842 BICDL1Q6ZP65 573 aa12.37□□□□□ -0.43
USF1-210ENST00000531842 ZBTB1Q9Y2K1 713 aa12.37□□□□□ -0.43
USF1-210ENST00000531842 SOS1Q07889 1333 aaPredicted RBP12.37□□□□□ -0.43
USF1-210ENST00000531842 GLTPD2A6NH11 291 aa12.36□□□□□ -0.43
USF1-210ENST00000531842 HSP90AB1P08238 724 aaKnown RBP12.36□□□□□ -0.43
USF1-210ENST00000531842 C1orf141Q5JVX7 400 aa12.36□□□□□ -0.43
USF1-210ENST00000531842 MKRN1Q9UHC7 482 aaKnown RBP12.36□□□□□ -0.43
USF1-210ENST00000531842 SLX4Q8IY92 1834 aa12.36□□□□□ -0.43
USF1-210ENST00000531842 COL15A1P39059 1388 aa12.35□□□□□ -0.43
USF1-210ENST00000531842 ZPR1O75312 459 aa12.35□□□□□ -0.43
USF1-210ENST00000531842 SERPINB2P05120 415 aa12.35□□□□□ -0.43
USF1-210ENST00000531842 CYP19A1P11511 503 aaPredicted RBP12.35□□□□□ -0.43
USF1-210ENST00000531842 VEGFAP15692 232 aaPredicted RBP12.35□□□□□ -0.43
USF1-210ENST00000531842 LMNB1P20700 586 aa12.35□□□□□ -0.43
USF1-210ENST00000531842 C2CD5Q86YS7 1000 aa12.35□□□□□ -0.43
USF1-210ENST00000531842 UBR2Q8IWV8 1755 aa12.34□□□□□ -0.43
USF1-210ENST00000531842 AMOTQ4VCS5 1084 aa12.34□□□□□ -0.43
USF1-210ENST00000531842 PANK3Q9H999 370 aa12.34□□□□□ -0.43
USF1-210ENST00000531842 CANXP27824 592 aaKnown RBP12.33□□□□□ -0.44
USF1-210ENST00000531842 TTLL6Q8N841 843 aa12.33□□□□□ -0.44
USF1-210ENST00000531842 SLC52A2Q9HAB3 445 aa12.33□□□□□ -0.44
USF1-210ENST00000531842 NARFQ9UHQ1 456 aa12.33□□□□□ -0.44
USF1-210ENST00000531842 C21orf2O43822 256 aa12.32□□□□□ -0.44
USF1-210ENST00000531842 HMOX1P09601 288 aa12.32□□□□□ -0.44
USF1-210ENST00000531842 SCN7AQ01118 1682 aa12.32□□□□□ -0.44
USF1-210ENST00000531842 FOXN1O15353 648 aa12.31□□□□□ -0.44
USF1-210ENST00000531842 RNMTO43148 476 aaKnown RBP12.31□□□□□ -0.44
USF1-210ENST00000531842 IL13P35225 146 aa12.31□□□□□ -0.44
USF1-210ENST00000531842 TBC1D9BQ66K14 1250 aa12.31□□□□□ -0.44
USF1-210ENST00000531842 ZNF622Q969S3 477 aaKnown RBP eCLIP12.31□□□□□ -0.447e-6■■□□□ 12.8
USF1-210ENST00000531842 MRC1P22897 1456 aa12.31□□□□□ -0.44
USF1-210ENST00000531842 DDNO94850 711 aaPredicted RBP12.3□□□□□ -0.44
USF1-210ENST00000531842 MORC1Q86VD1 984 aa12.3□□□□□ -0.44
USF1-210ENST00000531842 ZNF330Q9Y3S2 320 aaPredicted RBP12.3□□□□□ -0.44
USF1-210ENST00000531842 H0YIN7 160 aa12.29□□□□□ -0.44
USF1-210ENST00000531842 AKAP4Q5JQC9 854 aa12.29□□□□□ -0.44
USF1-210ENST00000531842 SIPA1L3O60292 1781 aaPredicted RBP12.28□□□□□ -0.44
USF1-210ENST00000531842 ARFGEF2Q9Y6D5 1785 aa12.28□□□□□ -0.44
USF1-210ENST00000531842 HSPA5P11021 654 aaKnown RBP12.28□□□□□ -0.44
USF1-210ENST00000531842 PIP4K2AP48426 406 aaPredicted RBP12.28□□□□□ -0.44
USF1-210ENST00000531842 MTHFSDQ2M296 383 aaKnown RBP12.28□□□□□ -0.44
USF1-210ENST00000531842 ERFEQ4G0M1 354 aa12.28□□□□□ -0.44
USF1-210ENST00000531842 TBC1D2BQ9UPU7 963 aa12.28□□□□□ -0.44
USF1-210ENST00000531842 ZC3H4Q9UPT8 1303 aaKnown RBP12.28□□□□□ -0.44
USF1-210ENST00000531842 PRR5LQ6MZQ0 368 aa12.27□□□□□ -0.45
USF1-210ENST00000531842 OLFM4Q6UX06 510 aa12.27□□□□□ -0.45
USF1-210ENST00000531842 BCORQ6W2J9 1755 aa12.26□□□□□ -0.45
USF1-210ENST00000531842 CHADLQ6NUI6 762 aa12.26□□□□□ -0.45
USF1-210ENST00000531842 EIF5P55010 431 aaKnown RBP12.25□□□□□ -0.45
USF1-210ENST00000531842 CNGB1Q14028 1251 aaPredicted RBP12.25□□□□□ -0.45
USF1-210ENST00000531842 DPY19L2Q6NUT2 758 aa12.25□□□□□ -0.45
USF1-210ENST00000531842 ZNF496Q96IT1 587 aaPredicted RBP12.25□□□□□ -0.45
USF1-210ENST00000531842 CREBZFQ9NS37 354 aa12.25□□□□□ -0.45
USF1-210ENST00000531842 KCNQ3O43525 872 aa12.24□□□□□ -0.45
USF1-210ENST00000531842 A1BGP04217 495 aa12.24□□□□□ -0.45
USF1-210ENST00000531842 SCN4AP35499 1836 aa12.24□□□□□ -0.45
USF1-210ENST00000531842 VEGFBP49765 207 aa12.24□□□□□ -0.45
USF1-210ENST00000531842 SLC51AQ86UW1 340 aa12.24□□□□□ -0.45
USF1-210ENST00000531842 CNTNAP1P78357 1384 aa12.23□□□□□ -0.45
USF1-210ENST00000531842 ZNF541Q9H0D2 1346 aa12.23□□□□□ -0.45
USF1-210ENST00000531842 FMR1Q06787 632 aaKnown RBP eCLIP12.23□□□□□ -0.45
USF1-210ENST00000531842 EAPPQ56P03 285 aaPredicted RBP12.23□□□□□ -0.45
USF1-210ENST00000531842 PRPF40BQ6NWY9 871 aaKnown RBP12.23□□□□□ -0.45
USF1-210ENST00000531842 TAOK3Q9H2K8 898 aa12.23□□□□□ -0.45
USF1-210ENST00000531842 ADAMTSL1Q8N6G6 1762 aa12.23□□□□□ -0.45
USF1-210ENST00000531842 PASKQ96RG2 1323 aa12.22□□□□□ -0.45
USF1-210ENST00000531842 PRAMEF22A3QJZ6 481 aa12.22□□□□□ -0.45
USF1-210ENST00000531842 LBX1P52954 281 aa12.22□□□□□ -0.45
USF1-210ENST00000531842 BRIP1Q9BX63 1249 aa12.22□□□□□ -0.45
USF1-210ENST00000531842 CAMTA2O94983 1202 aa12.21□□□□□ -0.45
USF1-210ENST00000531842 PDE6BP35913 854 aa12.21□□□□□ -0.45
USF1-210ENST00000531842 IL17REQ8NFR9 667 aa12.21□□□□□ -0.45
USF1-210ENST00000531842 TAF1DQ9H5J8 278 aaPredicted RBP12.21□□□□□ -0.45
USF1-210ENST00000531842 ZNF277Q9NRM2 450 aaPredicted RBP12.21□□□□□ -0.45
USF1-210ENST00000531842 LTBP1Q14766 1721 aa12.2□□□□□ -0.46
USF1-210ENST00000531842 HEG1Q9ULI3 1381 aa12.2□□□□□ -0.46
USF1-210ENST00000531842 FAM177BA6PVY3 158 aa12.2□□□□□ -0.46
USF1-210ENST00000531842 ITGBL1O95965 494 aaPredicted RBP12.2□□□□□ -0.46
USF1-210ENST00000531842 SRGNP10124 158 aa12.2□□□□□ -0.46
USF1-210ENST00000531842 AMER1Q5JTC6 1135 aaPredicted RBP12.2□□□□□ -0.46
USF1-210ENST00000531842 TTC5Q8N0Z6 440 aa12.2□□□□□ -0.46
USF1-210ENST00000531842 VSIG10Q8N0Z9 540 aa12.2□□□□□ -0.46
USF1-210ENST00000531842 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms