RNA–Protein interactions for RNA: ENST00000531744.5

SDHD-212, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-212ENST00000531744 PPP2R1AP30153 589 aa16.92■□□□□ 0.3
SDHD-212ENST00000531744 TM4SF1P30408 202 aa16.92■□□□□ 0.3
SDHD-212ENST00000531744 CCDC87Q9NVE4 849 aa16.92■□□□□ 0.3
SDHD-212ENST00000531744 POLRMTO00411 1230 aaKnown RBP16.9■□□□□ 0.3
SDHD-212ENST00000531744 KCNQ3O43525 872 aa16.9■□□□□ 0.3
SDHD-212ENST00000531744 TGFB2P61812 414 aa16.9■□□□□ 0.3
SDHD-212ENST00000531744 USPL1Q5W0Q7 1092 aa16.9■□□□□ 0.3
SDHD-212ENST00000531744 COL11A2P13942 1736 aaPredicted RBP16.9■□□□□ 0.3
SDHD-212ENST00000531744 COL15A1P39059 1388 aa16.89■□□□□ 0.3
SDHD-212ENST00000531744 CACNA1SQ13698 1873 aa16.89■□□□□ 0.29
SDHD-212ENST00000531744 ZNF496Q96IT1 587 aaPredicted RBP16.89■□□□□ 0.29
SDHD-212ENST00000531744 GNAT3A8MTJ3 354 aa16.88■□□□□ 0.29
SDHD-212ENST00000531744 PRKAR2BP31323 418 aa16.88■□□□□ 0.29
SDHD-212ENST00000531744 VSIG10Q8N0Z9 540 aa16.88■□□□□ 0.29
SDHD-212ENST00000531744 PARP3Q9Y6F1 533 aa16.88■□□□□ 0.29
SDHD-212ENST00000531744 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
SDHD-212ENST00000531744 GAS2L2Q8NHY3 880 aa16.87■□□□□ 0.29
SDHD-212ENST00000531744 NARFQ9UHQ1 456 aa16.87■□□□□ 0.29
SDHD-212ENST00000531744 HEG1Q9ULI3 1381 aa16.87■□□□□ 0.29
SDHD-212ENST00000531744 GIGYF1O75420 1035 aaPredicted RBP16.86■□□□□ 0.29
SDHD-212ENST00000531744 EIF5P55010 431 aaKnown RBP16.86■□□□□ 0.29
SDHD-212ENST00000531744 NFIXQ14938 502 aa16.86■□□□□ 0.29
SDHD-212ENST00000531744 ZNF790Q6PG37 636 aa16.86■□□□□ 0.29
SDHD-212ENST00000531744 BCS1LQ9Y276 419 aa16.86■□□□□ 0.29
SDHD-212ENST00000531744 CARMIL3Q8ND23 1372 aa16.86■□□□□ 0.29
SDHD-212ENST00000531744 CHRNA5P30532 468 aa16.85■□□□□ 0.29
SDHD-212ENST00000531744 LAMB4A4D0S4 1761 aa16.84■□□□□ 0.29
SDHD-212ENST00000531744 CANXP27824 592 aaKnown RBP16.84■□□□□ 0.29
SDHD-212ENST00000531744 ZNF526Q8TF50 670 aaPredicted RBP16.84■□□□□ 0.29
SDHD-212ENST00000531744 PRAMEF22A3QJZ6 481 aa16.83■□□□□ 0.28
SDHD-212ENST00000531744 DICER1Q9UPY3 1922 aaKnown RBP16.82■□□□□ 0.28
SDHD-212ENST00000531744 SENP3-EIF4A1A0A087X0R7 540 aa16.82■□□□□ 0.28
SDHD-212ENST00000531744 ZPR1O75312 459 aa16.82■□□□□ 0.28
SDHD-212ENST00000531744 FCHSD2O94868 740 aa16.82■□□□□ 0.28
SDHD-212ENST00000531744 A1BGP04217 495 aa16.82■□□□□ 0.28
SDHD-212ENST00000531744 TEFQ10587 303 aa16.82■□□□□ 0.28
SDHD-212ENST00000531744 FER1L6Q2WGJ9 1857 aa16.82■□□□□ 0.28
SDHD-212ENST00000531744 ARFGEF2Q9Y6D5 1785 aa16.82■□□□□ 0.28
SDHD-212ENST00000531744 KIF3CO14782 793 aa16.81■□□□□ 0.28
SDHD-212ENST00000531744 U2AF1L5P0DN76 240 aaPredicted RBP16.81■□□□□ 0.28
SDHD-212ENST00000531744 U2AF1Q01081 240 aaKnown RBP eCLIP16.81■□□□□ 0.28
SDHD-212ENST00000531744 DCTN1Q14203 1278 aa16.81■□□□□ 0.28
SDHD-212ENST00000531744 MCM10Q7L590 875 aa16.81■□□□□ 0.28
SDHD-212ENST00000531744 NUP98P52948 1817 aa16.8■□□□□ 0.28
SDHD-212ENST00000531744 SLX4Q8IY92 1834 aa16.8■□□□□ 0.28
SDHD-212ENST00000531744 TTC5Q8N0Z6 440 aa16.8■□□□□ 0.28
SDHD-212ENST00000531744 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
SDHD-212ENST00000531744 GPBP1L1Q9HC44 474 aaPredicted RBP16.8■□□□□ 0.28
SDHD-212ENST00000531744 USP16Q9Y5T5 823 aa16.8■□□□□ 0.28
SDHD-212ENST00000531744 TIAM2Q8IVF5 1701 aa16.79■□□□□ 0.28
SDHD-212ENST00000531744 PIP4K2AP48426 406 aaPredicted RBP16.79■□□□□ 0.28
SDHD-212ENST00000531744 PRELPP51888 382 aa16.79■□□□□ 0.28
SDHD-212ENST00000531744 TBC1D9BQ66K14 1250 aa16.79■□□□□ 0.28
SDHD-212ENST00000531744 ARHGAP27Q6ZUM4 889 aa16.79■□□□□ 0.28
SDHD-212ENST00000531744 PIM2Q9P1W9 311 aa16.79■□□□□ 0.28
SDHD-212ENST00000531744 BTBD11A6QL63 1104 aa16.78■□□□□ 0.28
SDHD-212ENST00000531744 STARD3NLO95772 234 aa16.78■□□□□ 0.28
SDHD-212ENST00000531744 SERPINB2P05120 415 aa16.78■□□□□ 0.28
SDHD-212ENST00000531744 PLEKHF1Q96S99 279 aa16.78■□□□□ 0.28
SDHD-212ENST00000531744 TBC1D2BQ9UPU7 963 aa16.78■□□□□ 0.28
SDHD-212ENST00000531744 CAMTA2O94983 1202 aa16.77■□□□□ 0.28
SDHD-212ENST00000531744 FMNL2Q96PY5 1086 aa16.77■□□□□ 0.28
SDHD-212ENST00000531744 IL6STP40189 918 aaPredicted RBP16.76■□□□□ 0.27
SDHD-212ENST00000531744 DALRD3Q5D0E6 543 aaKnown RBP16.76■□□□□ 0.27
SDHD-212ENST00000531744 NUDCQ9Y266 331 aa16.76■□□□□ 0.27
SDHD-212ENST00000531744 PCNTO95613 3336 aa16.75■□□□□ 0.27
SDHD-212ENST00000531744 BICDL1Q6ZP65 573 aa16.75■□□□□ 0.27
SDHD-212ENST00000531744 CCDC24Q8N4L8 307 aa16.75■□□□□ 0.27
SDHD-212ENST00000531744 TNRC6CQ9HCJ0 1690 aaKnown RBP16.75■□□□□ 0.27
SDHD-212ENST00000531744 NBPF26B4DH59 902 aa16.74■□□□□ 0.27
SDHD-212ENST00000531744 C9orf131Q5VYM1 1079 aa16.74■□□□□ 0.27
SDHD-212ENST00000531744 NBPF10Q6P3W6 841 aaKnown RBP16.74■□□□□ 0.27
SDHD-212ENST00000531744 NBPF15Q8N660 670 aa16.74■□□□□ 0.27
SDHD-212ENST00000531744 TEX13AQ9BXU3 409 aaPredicted RBP16.74■□□□□ 0.27
SDHD-212ENST00000531744 MIS18AQ9NYP9 233 aa16.74■□□□□ 0.27
SDHD-212ENST00000531744 RASSF7Q02833 373 aa16.73■□□□□ 0.27
SDHD-212ENST00000531744 PRR5LQ6MZQ0 368 aa16.73■□□□□ 0.27
SDHD-212ENST00000531744 NMRK2Q9NPI5 230 aa16.73■□□□□ 0.27
SDHD-212ENST00000531744 A0A087WZG4 1122 aa16.72■□□□□ 0.27
SDHD-212ENST00000531744 HTATSF1O43719 755 aaKnown RBP16.72■□□□□ 0.27
SDHD-212ENST00000531744 ZNF330Q9Y3S2 320 aaPredicted RBP16.72■□□□□ 0.27
SDHD-212ENST00000531744 C2CD5Q86YS7 1000 aa16.71■□□□□ 0.27
SDHD-212ENST00000531744 THUMPD2Q9BTF0 503 aaKnown RBP16.71■□□□□ 0.27
SDHD-212ENST00000531744 NFKBIEO00221 500 aa16.69■□□□□ 0.26
SDHD-212ENST00000531744 SNRPA1P09661 255 aaKnown RBP16.69■□□□□ 0.26
SDHD-212ENST00000531744 TAF7Q15545 349 aaPredicted RBP16.69■□□□□ 0.26
SDHD-212ENST00000531744 DZIP3Q86Y13 1208 aaKnown RBP16.69■□□□□ 0.26
SDHD-212ENST00000531744 RTF1Q92541 710 aaKnown RBP16.69■□□□□ 0.26
SDHD-212ENST00000531744 RNF181Q9P0P0 153 aa16.69■□□□□ 0.26
SDHD-212ENST00000531744 WDR90Q96KV7 1748 aa16.69■□□□□ 0.26
SDHD-212ENST00000531744 HSPA6P17066 643 aa16.68■□□□□ 0.26
SDHD-212ENST00000531744 NFE2L2Q16236 605 aa16.67■□□□□ 0.26
SDHD-212ENST00000531744 TTLL6Q8N841 843 aa16.67■□□□□ 0.26
SDHD-212ENST00000531744 BRIP1Q9BX63 1249 aa16.67■□□□□ 0.26
SDHD-212ENST00000531744 HLFQ16534 295 aa16.66■□□□□ 0.26
SDHD-212ENST00000531744 ANKRD36CQ5JPF3 1778 aa16.66■□□□□ 0.26
SDHD-212ENST00000531744 LAMB2P55268 1798 aa16.65■□□□□ 0.26
SDHD-212ENST00000531744 H0YIN7 160 aa16.65■□□□□ 0.26
SDHD-212ENST00000531744 EIF4A1P60842 406 aaKnown RBP16.65■□□□□ 0.26
SDHD-212ENST00000531744 SETDB2Q96T68 719 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms