RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 TRPM3Q9HCF6 1732 aaPredicted RBP20.55■□□□□ 0.88
VPS26B-206ENST00000531741 NPHP4O75161 1426 aaPredicted RBP20.55■□□□□ 0.88
VPS26B-206ENST00000531741 MST1RQ04912 1400 aa20.55■□□□□ 0.88
VPS26B-206ENST00000531741 RNMTO43148 476 aaKnown RBP20.54■□□□□ 0.88
VPS26B-206ENST00000531741 NEK4P51957 841 aa20.54■□□□□ 0.88
VPS26B-206ENST00000531741 ADCY9O60503 1353 aa20.54■□□□□ 0.88
VPS26B-206ENST00000531741 CRYBG1Q9Y4K1 1723 aa20.54■□□□□ 0.88
VPS26B-206ENST00000531741 PI4KAP2A4QPH2 592 aa20.54■□□□□ 0.88
VPS26B-206ENST00000531741 SURF6O75683 361 aaKnown RBP20.54■□□□□ 0.88
VPS26B-206ENST00000531741 MTX1Q13505 466 aa20.54■□□□□ 0.88
VPS26B-206ENST00000531741 CUL4AQ13619 759 aa20.54■□□□□ 0.88
VPS26B-206ENST00000531741 GAS2L3Q86XJ1 694 aa20.54■□□□□ 0.88
VPS26B-206ENST00000531741 ZGPATQ8N5A5 531 aaKnown RBP20.54■□□□□ 0.88
VPS26B-206ENST00000531741 PI4KAP1Q8N8J0 262 aa20.54■□□□□ 0.88
VPS26B-206ENST00000531741 ARXQ96QS3 562 aa20.54■□□□□ 0.88
VPS26B-206ENST00000531741 DBF4Q9UBU7 674 aaPredicted RBP20.54■□□□□ 0.88
VPS26B-206ENST00000531741 SIPA1L3O60292 1781 aaPredicted RBP20.53■□□□□ 0.88
VPS26B-206ENST00000531741 LRRC59Q96AG4 307 aaKnown RBP20.53■□□□□ 0.88
VPS26B-206ENST00000531741 TMX3Q96JJ7 454 aa20.53■□□□□ 0.88
VPS26B-206ENST00000531741 DDX49Q9Y6V7 483 aaKnown RBP20.53■□□□□ 0.88
VPS26B-206ENST00000531741 USP42Q9H9J4 1324 aaKnown RBP20.53■□□□□ 0.88
VPS26B-206ENST00000531741 PXDNQ92626 1479 aa20.52■□□□□ 0.88
VPS26B-206ENST00000531741 SRGAP3O43295 1099 aa20.52■□□□□ 0.88
VPS26B-206ENST00000531741 KCNQ3O43525 872 aa20.52■□□□□ 0.88
VPS26B-206ENST00000531741 NBPF7P0C2Y1 421 aaPredicted RBP20.52■□□□□ 0.88
VPS26B-206ENST00000531741 C1orf141Q5JVX7 400 aa20.52■□□□□ 0.88
VPS26B-206ENST00000531741 UNC5CLQ8IV45 518 aa20.52■□□□□ 0.88
VPS26B-206ENST00000531741 PI4K2BQ8TCG2 481 aa20.52■□□□□ 0.88
VPS26B-206ENST00000531741 INTS4Q96HW7 963 aaKnown RBP20.52■□□□□ 0.88
VPS26B-206ENST00000531741 ANO2Q9NQ90 1003 aa20.52■□□□□ 0.88
VPS26B-206ENST00000531741 LMBRD1Q9NUN5 540 aa20.52■□□□□ 0.88
VPS26B-206ENST00000531741 KIF1AQ12756 1690 aa20.52■□□□□ 0.88
VPS26B-206ENST00000531741 ALDH1L1O75891 902 aa20.52■□□□□ 0.87
VPS26B-206ENST00000531741 PKP1Q13835 747 aa20.51■□□□□ 0.87
VPS26B-206ENST00000531741 RBM33Q96EV2 1170 aaKnown RBP20.51■□□□□ 0.87
VPS26B-206ENST00000531741 IL1RAPL2Q9NP60 686 aa20.51■□□□□ 0.87
VPS26B-206ENST00000531741 ZDHHC9Q9Y397 364 aa20.51■□□□□ 0.87
VPS26B-206ENST00000531741 MCTP1Q6DN14 999 aa20.5■□□□□ 0.87
VPS26B-206ENST00000531741 PALD1Q9ULE6 856 aa20.5■□□□□ 0.87
VPS26B-206ENST00000531741 HDAC5Q9UQL6 1122 aa20.5■□□□□ 0.87
VPS26B-206ENST00000531741 MPRIPQ6WCQ1 1025 aa20.5■□□□□ 0.87
VPS26B-206ENST00000531741 RRAGDQ9NQL2 400 aaPredicted RBP20.5■□□□□ 0.87
VPS26B-206ENST00000531741 GIGYF1O75420 1035 aaPredicted RBP20.49■□□□□ 0.87
VPS26B-206ENST00000531741 ZNF445P59923 1031 aa20.49■□□□□ 0.87
VPS26B-206ENST00000531741 ANKRD24Q8TF21 1146 aa20.49■□□□□ 0.87
VPS26B-206ENST00000531741 TTC41PQ6P2S7 1318 aa20.49■□□□□ 0.87
VPS26B-206ENST00000531741 HSPA4P34932 840 aa20.49■□□□□ 0.87
VPS26B-206ENST00000531741 NUTM1Q86Y26 1132 aa20.49■□□□□ 0.87
VPS26B-206ENST00000531741 ORAI2Q96SN7 254 aa20.49■□□□□ 0.87
VPS26B-206ENST00000531741 ZBTB7CA1YPR0 619 aa20.47■□□□□ 0.87
VPS26B-206ENST00000531741 KSR2Q6VAB6 950 aa20.47■□□□□ 0.87
VPS26B-206ENST00000531741 CNTROBQ8N137 903 aa20.47■□□□□ 0.87
VPS26B-206ENST00000531741 RAD50Q92878 1312 aa20.46■□□□□ 0.87
VPS26B-206ENST00000531741 SGSM2O43147 1006 aa20.46■□□□□ 0.87
VPS26B-206ENST00000531741 TRHP20396 242 aaPredicted RBP20.46■□□□□ 0.87
VPS26B-206ENST00000531741 HYPKQ9NX55 129 aa20.46■□□□□ 0.87
VPS26B-206ENST00000531741 BRD1O95696 1058 aa20.45■□□□□ 0.86
VPS26B-206ENST00000531741 GLRX3O76003 335 aaKnown RBP20.44■□□□□ 0.86
VPS26B-206ENST00000531741 IL25Q9H293 177 aa20.44■□□□□ 0.86
VPS26B-206ENST00000531741 MAP3K2Q9Y2U5 619 aa20.44■□□□□ 0.86
VPS26B-206ENST00000531741 ABCC6O95255 1503 aa20.44■□□□□ 0.86
VPS26B-206ENST00000531741 UTYO14607 1347 aa20.44■□□□□ 0.86
VPS26B-206ENST00000531741 ALS2Q96Q42 1657 aa20.44■□□□□ 0.86
VPS26B-206ENST00000531741 ERC1Q8IUD2 1116 aa20.44■□□□□ 0.86
VPS26B-206ENST00000531741 C1orf167Q5SNV9 1468 aa20.43■□□□□ 0.86
VPS26B-206ENST00000531741 PLEKHG2Q9H7P9 1386 aa20.43■□□□□ 0.86
VPS26B-206ENST00000531741 PLEKHG5O94827 1062 aa20.43■□□□□ 0.86
VPS26B-206ENST00000531741 ANXA1P04083 346 aa20.43■□□□□ 0.86
VPS26B-206ENST00000531741 CLCN1P35523 988 aa20.42■□□□□ 0.86
VPS26B-206ENST00000531741 KRT28Q7Z3Y7 464 aa20.42■□□□□ 0.86
VPS26B-206ENST00000531741 LINS1Q8NG48 757 aa20.42■□□□□ 0.86
VPS26B-206ENST00000531741 LSG1Q9H089 658 aaKnown RBP20.42■□□□□ 0.86
VPS26B-206ENST00000531741 C9orf78Q9NZ63 289 aaPredicted RBP20.42■□□□□ 0.86
VPS26B-206ENST00000531741 AXIN2Q9Y2T1 843 aa20.42■□□□□ 0.86
VPS26B-206ENST00000531741 ERBB3P21860 1342 aa20.42■□□□□ 0.86
VPS26B-206ENST00000531741 PROSER3Q2NL68 480 aa20.41■□□□□ 0.86
VPS26B-206ENST00000531741 ZSCAN23Q3MJ62 389 aa20.41■□□□□ 0.86
VPS26B-206ENST00000531741 CLASRPQ8N2M8 674 aaKnown RBP20.41■□□□□ 0.86
VPS26B-206ENST00000531741 DDX21Q9NR30 783 aaKnown RBP eCLIP20.41■□□□□ 0.86
VPS26B-206ENST00000531741 RGPD5Q99666 1765 aa20.41■□□□□ 0.86
VPS26B-206ENST00000531741 PRPF40AO75400 957 aaKnown RBP20.41■□□□□ 0.86
VPS26B-206ENST00000531741 XPCQ01831 940 aaPredicted RBP20.41■□□□□ 0.86
VPS26B-206ENST00000531741 SCN11AQ9UI33 1791 aa20.4■□□□□ 0.86
VPS26B-206ENST00000531741 DDX58O95786 925 aaKnown RBP20.4■□□□□ 0.86
VPS26B-206ENST00000531741 NASPP49321 788 aaPredicted RBP20.4■□□□□ 0.86
VPS26B-206ENST00000531741 CCDC173Q0VFZ6 552 aa20.4■□□□□ 0.86
VPS26B-206ENST00000531741 CAVIN1Q6NZI2 390 aaKnown RBP20.4■□□□□ 0.86
VPS26B-206ENST00000531741 PPP1R9BQ96SB3 815 aa20.4■□□□□ 0.86
VPS26B-206ENST00000531741 GPT2Q8TD30 523 aa20.39■□□□□ 0.86
VPS26B-206ENST00000531741 GPATCH3Q96I76 525 aa20.39■□□□□ 0.86
VPS26B-206ENST00000531741 MBD3O95983 291 aa20.39■□□□□ 0.85
VPS26B-206ENST00000531741 OS9Q13438 667 aaPredicted RBP20.39■□□□□ 0.85
VPS26B-206ENST00000531741 UPF3BQ9BZI7 483 aaKnown RBP20.39■□□□□ 0.85
VPS26B-206ENST00000531741 ECHDC1Q9NTX5 307 aa20.39■□□□□ 0.85
VPS26B-206ENST00000531741 RUFY2Q8WXA3 655 aa20.38■□□□□ 0.85
VPS26B-206ENST00000531741 TTC14Q96N46 770 aa20.38■□□□□ 0.85
VPS26B-206ENST00000531741 C19orf44Q9H6X5 657 aa20.38■□□□□ 0.85
VPS26B-206ENST00000531741 SNX14Q9Y5W7 946 aa20.38■□□□□ 0.85
VPS26B-206ENST00000531741 GRM8O00222 908 aa20.38■□□□□ 0.85
VPS26B-206ENST00000531741 MAP4K4O95819 1239 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms