RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ESF1Q9H501 851 aaKnown RBP7.33□□□□□ -1.24
PCF11-205ENST00000530906 ATP13A2Q9NQ11 1180 aa7.33□□□□□ -1.24
PCF11-205ENST00000530906 NSD3Q9BZ95 1437 aa7.33□□□□□ -1.24
PCF11-205ENST00000530906 RIMS2Q9UQ26 1411 aa7.33□□□□□ -1.24
PCF11-205ENST00000530906 ABCC11Q96J66 1382 aa7.33□□□□□ -1.24
PCF11-205ENST00000530906 NLRP1Q9C000 1473 aa7.32□□□□□ -1.24
PCF11-205ENST00000530906 CNGB1Q14028 1251 aaPredicted RBP7.32□□□□□ -1.24
PCF11-205ENST00000530906 PTCRAQ6ISU1 281 aaPredicted RBP7.32□□□□□ -1.24
PCF11-205ENST00000530906 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.32□□□□□ -1.24
PCF11-205ENST00000530906 RETREG3Q86VR2 466 aa7.32□□□□□ -1.24
PCF11-205ENST00000530906 CFAP53Q96M91 514 aa7.32□□□□□ -1.24
PCF11-205ENST00000530906 CARD14Q9BXL6 1004 aa7.32□□□□□ -1.24
PCF11-205ENST00000530906 TERF2IPQ9NYB0 399 aa7.32□□□□□ -1.24
PCF11-205ENST00000530906 RCAN3Q9UKA8 241 aa7.32□□□□□ -1.24
PCF11-205ENST00000530906 PCDHGC3Q9UN70 934 aa7.32□□□□□ -1.24
PCF11-205ENST00000530906 TECPR2O15040 1411 aa7.32□□□□□ -1.24
PCF11-205ENST00000530906 FAM135BQ49AJ0 1406 aa7.32□□□□□ -1.24
PCF11-205ENST00000530906 ATP7BP35670 1465 aa7.31□□□□□ -1.24
PCF11-205ENST00000530906 WFS1O76024 890 aa7.31□□□□□ -1.24
PCF11-205ENST00000530906 SNRPBP14678 240 aaKnown RBP7.31□□□□□ -1.24
PCF11-205ENST00000530906 NUTM1Q86Y26 1132 aa7.31□□□□□ -1.24
PCF11-205ENST00000530906 BCANQ96GW7 911 aa7.31□□□□□ -1.24
PCF11-205ENST00000530906 ADAMTS8Q9UP79 889 aa7.31□□□□□ -1.24
PCF11-205ENST00000530906 CPS1P31327 1500 aa7.31□□□□□ -1.24
PCF11-205ENST00000530906 ZMYM3Q14202 1370 aa7.31□□□□□ -1.24
PCF11-205ENST00000530906 ZNF521Q96K83 1311 aa7.3□□□□□ -1.24
PCF11-205ENST00000530906 SIAH2O43255 324 aa7.3□□□□□ -1.24
PCF11-205ENST00000530906 RRP1P56182 461 aaKnown RBP7.3□□□□□ -1.24
PCF11-205ENST00000530906 TMEM132EQ6IEE7 984 aa7.3□□□□□ -1.24
PCF11-205ENST00000530906 MORC1Q86VD1 984 aa7.3□□□□□ -1.24
PCF11-205ENST00000530906 TRIM47Q96LD4 638 aa7.3□□□□□ -1.24
PCF11-205ENST00000530906 TNRQ92752 1358 aa7.3□□□□□ -1.24
PCF11-205ENST00000530906 SHPRHQ149N8 1683 aa7.29□□□□□ -1.24
PCF11-205ENST00000530906 FDX1P10109 184 aa7.29□□□□□ -1.24
PCF11-205ENST00000530906 LCE2CQ5TA81 110 aa7.29□□□□□ -1.24
PCF11-205ENST00000530906 FBXO31Q5XUX0 539 aaPredicted RBP7.29□□□□□ -1.24
PCF11-205ENST00000530906 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.29□□□□□ -1.24
PCF11-205ENST00000530906 NUDT12Q9BQG2 462 aa7.29□□□□□ -1.24
PCF11-205ENST00000530906 POGKQ9P215 609 aa7.29□□□□□ -1.24
PCF11-205ENST00000530906 NRXN3Q9Y4C0 1643 aa7.29□□□□□ -1.24
PCF11-205ENST00000530906 UBR1Q8IWV7 1749 aa7.29□□□□□ -1.24
PCF11-205ENST00000530906 E9PSI1 815 aa7.28□□□□□ -1.24
PCF11-205ENST00000530906 SSTR3P32745 418 aaPredicted RBP7.28□□□□□ -1.24
PCF11-205ENST00000530906 HDGFL2Q7Z4V5 671 aaPredicted RBP7.28□□□□□ -1.24
PCF11-205ENST00000530906 SLC12A5Q9H2X9 1139 aa7.28□□□□□ -1.24
PCF11-205ENST00000530906 KIF20BQ96Q89 1820 aa7.28□□□□□ -1.24
PCF11-205ENST00000530906 ADGRB2O60241 1585 aa7.28□□□□□ -1.24
PCF11-205ENST00000530906 DIP2AQ14689 1571 aa7.28□□□□□ -1.24
PCF11-205ENST00000530906 CCDC27Q2M243 656 aa7.27□□□□□ -1.25
PCF11-205ENST00000530906 TRMT2AQ8IZ69 625 aaKnown RBP7.27□□□□□ -1.25
PCF11-205ENST00000530906 KRI1Q8N9T8 703 aaKnown RBP7.27□□□□□ -1.25
PCF11-205ENST00000530906 SPIRE2Q8WWL2 714 aa7.27□□□□□ -1.25
PCF11-205ENST00000530906 CCDC136Q96JN2 1154 aa7.27□□□□□ -1.25
PCF11-205ENST00000530906 PRAM1Q96QH2 718 aa7.27□□□□□ -1.25
PCF11-205ENST00000530906 PNNQ9H307 717 aaKnown RBP7.27□□□□□ -1.25
PCF11-205ENST00000530906 SENP2Q9HC62 589 aa7.27□□□□□ -1.25
PCF11-205ENST00000530906 A0A1W2PP64 1363 aa7.27□□□□□ -1.25
PCF11-205ENST00000530906 TMEM2Q9UHN6 1383 aa7.27□□□□□ -1.25
PCF11-205ENST00000530906 NKTRP30414 1462 aaKnown RBP7.27□□□□□ -1.25
PCF11-205ENST00000530906 IQSEC2Q5JU85 1478 aa7.27□□□□□ -1.25
PCF11-205ENST00000530906 SLIT1O75093 1534 aa7.27□□□□□ -1.25
PCF11-205ENST00000530906 CDC42BPGQ6DT37 1551 aa7.26□□□□□ -1.25
PCF11-205ENST00000530906 PLEKHG1Q9ULL1 1385 aa7.26□□□□□ -1.25
PCF11-205ENST00000530906 PLEKHH1Q9ULM0 1364 aa7.26□□□□□ -1.25
PCF11-205ENST00000530906 C6orf229H3BNL8 230 aa7.26□□□□□ -1.25
PCF11-205ENST00000530906 WIPF1O43516 503 aa7.26□□□□□ -1.25
PCF11-205ENST00000530906 ALDH1A1P00352 501 aa7.26□□□□□ -1.25
PCF11-205ENST00000530906 NDUFV2P19404 249 aa7.26□□□□□ -1.25
PCF11-205ENST00000530906 SRPK2P78362 688 aaKnown RBP7.26□□□□□ -1.25
PCF11-205ENST00000530906 BARGINQ6ZT62 677 aa7.26□□□□□ -1.25
PCF11-205ENST00000530906 RUNDC1Q96C34 613 aa7.26□□□□□ -1.25
PCF11-205ENST00000530906 EDC4Q6P2E9 1401 aaKnown RBP7.26□□□□□ -1.25
PCF11-205ENST00000530906 CD163L1Q9NR16 1453 aa7.25□□□□□ -1.25
PCF11-205ENST00000530906 ARHGAP23Q9P227 1491 aa7.25□□□□□ -1.25
PCF11-205ENST00000530906 MOXD2PA6NHM9 499 aa7.25□□□□□ -1.25
PCF11-205ENST00000530906 CCNYL3P0C7X3 344 aa7.25□□□□□ -1.25
PCF11-205ENST00000530906 MS4A1P11836 297 aa7.25□□□□□ -1.25
PCF11-205ENST00000530906 SH3BP2P78314 561 aa7.25□□□□□ -1.25
PCF11-205ENST00000530906 IRX6P78412 446 aaPredicted RBP7.25□□□□□ -1.25
PCF11-205ENST00000530906 SLFN5Q08AF3 891 aa7.25□□□□□ -1.25
PCF11-205ENST00000530906 AAMPQ13685 434 aa7.25□□□□□ -1.25
PCF11-205ENST00000530906 AMHR2Q16671 573 aa7.25□□□□□ -1.25
PCF11-205ENST00000530906 DUSP27Q5VZP5 1158 aa7.25□□□□□ -1.25
PCF11-205ENST00000530906 WDR63Q8IWG1 891 aa7.25□□□□□ -1.25
PCF11-205ENST00000530906 EHBP1Q8NDI1 1231 aa7.25□□□□□ -1.25
PCF11-205ENST00000530906 PNPLA6Q8IY17 1366 aa7.24□□□□□ -1.25
PCF11-205ENST00000530906 FER1L4A9Z1Z3 1794 aa7.24□□□□□ -1.25
PCF11-205ENST00000530906 TERTO14746 1132 aaKnown RBP7.24□□□□□ -1.25
PCF11-205ENST00000530906 ZMYND10O75800 440 aa7.24□□□□□ -1.25
PCF11-205ENST00000530906 CT47B1P0C2W7 299 aaPredicted RBP7.24□□□□□ -1.25
PCF11-205ENST00000530906 PTPRNQ16849 979 aa7.24□□□□□ -1.25
PCF11-205ENST00000530906 KIFC2Q96AC6 838 aa7.24□□□□□ -1.25
PCF11-205ENST00000530906 EVA1BQ9NVM1 165 aa7.24□□□□□ -1.25
PCF11-205ENST00000530906 STK26Q9P289 416 aa7.24□□□□□ -1.25
PCF11-205ENST00000530906 CPSF1Q10570 1443 aaKnown RBP7.24□□□□□ -1.25
PCF11-205ENST00000530906 FANCIQ9NVI1 1328 aa7.24□□□□□ -1.25
PCF11-205ENST00000530906 MON2Q7Z3U7 1717 aa7.24□□□□□ -1.25
PCF11-205ENST00000530906 C3P01024 1663 aa7.23□□□□□ -1.25
PCF11-205ENST00000530906 APAF1O14727 1248 aa7.23□□□□□ -1.25
PCF11-205ENST00000530906 MTHFSP49914 203 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms